Gchil6708.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6708.t1
Unique NameGchil6708.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length210
Homology
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BLAST of Gchil6708.t1 vs. uniprot
Match: A0A2V3ILY0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY0_9FLOR)

HSP 1 Score: 64.3 bits (155), Expect = 1.160e-8
Identity = 63/214 (29.44%), Postives = 94/214 (43.93%), Query Frame = 0 
Query:   33 SQSKIDEEEQVEDDPFFAIEYDVEAWDDTALIEAYERAVKSYRGDKDTKNNKDV-----------KAQS------------------KQDSCKAGAT---------SDIMVGAPEPSRKRKASNPTPQAAAPHVRVSKRSKRSIDHRQLPHQQIRTGGEHAEFEADTNRKMKIPPXXXXVLYGEPLSEELEQLLKSWYEAGYRAGLYVGRQSRD 208
            SQ + +E +  +D  F  IEYDV+AWDDT L+ AYERA++        K N+             + QS                  +Q   + GA          S+IM+    P+     +   P+   P +R +KR + S+D+ + P  ++    E +           IPP    +L  + LS ELE+LL SWY AGYRAGL    Q+ +
Sbjct:  131 SQPEENESDGTDDGNFVPIEYDVDAWDDTELVAAYERAMEMGGNTNRAKKNRXXXXXXXXXXXXHEHQSLDNDVHRGLQPFTTPLAREQGGTECGAERTLSCVPVPSEIMLPKLVPTHDWMTA--IPEDVEP-IRAAKRVRFSMDYGETPASEVVPMREPSTASPTHVSDSMIPPPPPAILARQRLSPELEELLNSWYIAGYRAGLAASTQTTE 341
The following BLAST results are available for this feature:
BLAST of Gchil6708.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILY0_9FLOR1.160e-829.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:426876..427594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6708.t1Gchil6708.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 426876..427594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6708.t1 ID=Gchil6708.t1|Name=Gchil6708.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=210bp
MGKESPPEPSLQEHAPEEAPQRDGNEEVFHNQSQSKIDEEEQVEDDPFFA
IEYDVEAWDDTALIEAYERAVKSYRGDKDTKNNKDVKAQSKQDSCKAGAT
SDIMVGAPEPSRKRKASNPTPQAAAPHVRVSKRSKRSIDHRQLPHQQIRT
GGEHAEFEADTNRKMKIPPPPPPVLYGEPLSEELEQLLKSWYEAGYRAGL
YVGRQSRDQ*
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