Gchil6701.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6701.t1
Unique NameGchil6701.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length369
Homology
BLAST of Gchil6701.t1 vs. uniprot
Match: R7Q5R6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5R6_CHOCR)

HSP 1 Score: 205 bits (521), Expect = 4.760e-58
Identity = 131/334 (39.22%), Postives = 180/334 (53.89%), Query Frame = 0
Query:    1 MQELPTQKPHIAKKHIIKGIKPARLRQRMKDIVESQRYGGFEKNYFGAFMHERARKAKSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN----SKQRIWERRRDKKRPKSVG---FPNEEIWNSSPKQGAVNKANNELPPCFNPECDGFHFIDQCLISTMEQKAKYRNEYKARKRLERE---AKSAGQRREPMKKGQFHRIGVEEIDSHSALFSVTFRQDAVEVFVMADQGSDVHIVPEDIFKTLQSSAPGLKVMELNPPHVYTGIGKTSGEVCCTHKSVMDVHLCIRHDKRLILRSLPRKSAKVESESVTIGRHGLQAIGCYNKAVLTA 324
            + +LPT+KPHIA KHI+K IKP RLR R++ I++ ++   F K  FGAFM   A +AK+LE                                     K+    RR D KR  S G    P + + ++  K     K  +  P CFNP CDG+HFID C IS+ EQ+ +Y++EY+ARK+ +        +  R+   +KG   RIG + ID HS+LFS TF   AVE  +MADQGSD +I+P  +F  +  +A  L V  L PPH Y+ + +  G + C      DVHL IRH  +L+LR++  K +   +E V IGR  LQAIGC NKA+L A
Sbjct:  153 LADLPTRKPHIAIKHILKRIKPFRLRSRIRSILQWRKGEDFGKKDFGAFMRVLAEQAKTLEMEQVSREQQMASSSDSDRSSEESSGKHDKRHRVTKKGKKSRRGRRGDAKRGVSSGQDKHPKDSLSSTESK-----KRRSFAPKCFNPACDGYHFIDDCPISSEEQRRRYKDEYRARKQRKMRFDTGSGSADRQIGQRKGSVRRIGADAIDPHSSLFSATFIDSAVESVIMADQGSDGNIMPPAVFDMIAEAASNLHVASLVPPHTYSFVDQDRG-LTCRRSMTADVHLRIRHGVKLVLRNITWKVSDQPAECVIIGREVLQAIGCDNKAMLQA 480          
BLAST of Gchil6701.t1 vs. uniprot
Match: A0A2V3IRL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL8_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 4.390e-33
Identity = 104/372 (27.96%), Postives = 174/372 (46.77%), Query Frame = 0
Query:    3 ELPTQKPHIAKKHIIKGIKPARLRQRMKDIVESQRYGGFEKNYFGAFMHERARKAKSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSKQRIWERRRDKKRPKSVGFPNEEIWNSSPKQGAVNKANNELPPCFNPECDGFHFIDQCLISTMEQKAKYRNEYKARKRLEREAKSAGQRREPMKKGQFHRIGVEEIDSHSALFSVTFRQDAVEVFVMADQGSDVHIVPEDIFKTLQSSAPGLKVMELNPPHVYTGIGKTSGEVCCTHKSVMDVHLCIRHDKRLILRSLPRKSAKVESESVTIGRHGLQAIGCYNKAVLTAAFDKHYGVINVPQAMED---DAARRIYQDFGRIAFMRS---NGVYHSQGG 368
            E   ++P +A +H+IK +   +LR+RM   ++ ++  GF+KNY  AFM E  ++AK ++                                +K R     R KK     G        +       +K   +   C NP CDG H++++C +++ E K K   EY   K+  + A+   +R+    KG     G  EI+ +S+LFS TF   AVE  V ADQGSD++++P  +   +  +   L+V+EL+    Y+     +  + C+ K   +V L IRH +++++  +    +  +++   I R  L AIG  N+ ++ AA D+H GV+N+P+ +E    DA   I      I   R+      YHS GG
Sbjct:  161 EFIEKQPQLAVEHVIKRVTHEQLRKRMLLTIKLRKEEGFKKNY-KAFMRELLKEAKQIDRHEAAKGLKARSNFSDSDDDLEHKEGPKPDCANKDR-----RRKKGASGSGA-------NGKSNAGKDKPKRDRTSCLNPVCDGHHYMNECPMTSDEDKKKLVAEYHEAKKARKGAEK--KRKGDKYKGNIGTFGGAEIEENSSLFSATFCTGAVEGIVPADQGSDINVIPPSLLTLMLEADASLQVIELDETLEYSNASLEAAPLRCSRKVTSNVMLRIRHGRKMMMPGMEWLVSDGDTKYAIIRREVLSAIGLDNRTLMAAACDRHDGVLNIPKLLEKAQADAQTPIEGSIHSILQSRAFEHGSTYHSTGG 517          
BLAST of Gchil6701.t1 vs. uniprot
Match: A0A2V3IG26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG26_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 4.270e-14
Identity = 67/255 (26.27%), Postives = 108/255 (42.35%), Query Frame = 0
Query:    3 ELPTQKPHIAKKHIIKGIKPARLRQRMKDIVESQRYGGFEKNYFGAFMHERARKAKSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSKQRIWERRRDKKRPKSVGFPNEEIWNSSPKQGAVNKANNELPPCFNPECDGFHFIDQCLISTMEQKAKYRNEYKARKRLEREAKSAGQRREPMKKGQFHR-----IGVEEIDSHSALFSVTFRQDAVEVFVMADQGSDVHIVPEDIFKTLQSSAPGLKVMELN 252
            E   ++P +A KH+IK +   +LR+RM   ++ ++  GF+KNY   FM E  ++AK ++                                +K R                                        C NP CDG H++++C  ++ E K K   EY        EAK A +  E M+KG  ++     +   EI+ +S+LFS TF   AVE  V+ADQGSD++++P  +   +      L+V+EL+
Sbjct:  161 EFIEKQPQLAVKHVIKRVTHEQLRKRMLLTIKLRKKEGFKKNY-KVFMRELVKEAKQIDRHEAAKGFKARSNFSDSDDDLEHKEGPKPDRANKDRX------------XXXXXXXXXXXXXXXXXXXXXXXXXXSCLNPVCDGHHYMNECPSTSDEDKKKLVAEY-------HEAKKARKGAEKMRKGDKYKGNIGTVSGAEIEENSSLFSATFCTGAVEGIVLADQGSDIYVIPPSLLTLILEVDASLQVIELD 395          
BLAST of Gchil6701.t1 vs. uniprot
Match: A0A2V3ID65_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID65_9FLOR)

HSP 1 Score: 73.2 bits (178), Expect = 6.700e-11
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 0
Query:  138 CFNPECDGFHFIDQCLISTMEQKAKYRNEYKARKRLEREAKSAGQRREPMKKGQFHRIGVEEIDSHSALFSVTFRQDAVEVFVMADQGSDVHIVP 232
            C NP CDG H++++C I++ E K K   EY   KR  + A+   +R+    KG    +   EI+ +S+LFS TF   AVE  V+ADQGSD++++P
Sbjct:  203 CLNPVCDGHHYMNECPITSDEDKKKLVAEYHEAKRARKGAEK--KRKGDKYKGNIGTVDGAEIEKNSSLFSATFCTGAVEGIVLADQGSDINVIP 295          
The following BLAST results are available for this feature:
BLAST of Gchil6701.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7Q5R6_CHOCR4.760e-5839.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IRL8_9FLOR4.390e-3327.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG26_9FLOR4.270e-1426.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID65_9FLOR6.700e-1141.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:401442..402548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6701.t1Gchil6701.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 401442..402548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6701.t1 ID=Gchil6701.t1|Name=Gchil6701.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=369bp
MQELPTQKPHIAKKHIIKGIKPARLRQRMKDIVESQRYGGFEKNYFGAFM
HERARKAKSLEQEQESEQELASSSESYSSSEEKTQVRKRKRKNSKQRIWE
RRRDKKRPKSVGFPNEEIWNSSPKQGAVNKANNELPPCFNPECDGFHFID
QCLISTMEQKAKYRNEYKARKRLEREAKSAGQRREPMKKGQFHRIGVEEI
DSHSALFSVTFRQDAVEVFVMADQGSDVHIVPEDIFKTLQSSAPGLKVME
LNPPHVYTGIGKTSGEVCCTHKSVMDVHLCIRHDKRLILRSLPRKSAKVE
SESVTIGRHGLQAIGCYNKAVLTAAFDKHYGVINVPQAMEDDAARRIYQD
FGRIAFMRSNGVYHSQGG*
back to top