Gchil6700.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6700.t1
Unique NameGchil6700.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length695
Homology
The following BLAST results are available for this feature:
BLAST of Gchil6700.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 356..361
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 362..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 295..317
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 337..355
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..294
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 472..496
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..441
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 497..516
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 636..694
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 583..588
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 540..558
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 609..613
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 318..336
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 403..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 559..582
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 467..471
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 517..539
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 384..402
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 614..635
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 589..608
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 442..466
NoneNo IPR availableTMHMMTMhelixcoord: 474..496
NoneNo IPR availableTMHMMTMhelixcoord: 559..581
NoneNo IPR availableTMHMMTMhelixcoord: 445..467
NoneNo IPR availableTMHMMTMhelixcoord: 516..538
NoneNo IPR availableTMHMMTMhelixcoord: 361..383
NoneNo IPR availableTMHMMTMhelixcoord: 601..623
NoneNo IPR availableTMHMMTMhelixcoord: 408..430
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 476..576
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 300..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:390798..393235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6700.t1Gchil6700.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 390798..393235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6700.t1 ID=Gchil6700.t1|Name=Gchil6700.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=695bp
MQARQVFPLLMYLILQPRNRIRRRLGLGRRLGLGRRLGLGVRVGLRLGLG
VRVGGIGDALTLGVSDALGLGVIDELTLGDGEVLTLGLGVIDALGLGEML
GVAEVLTLAVGDIEVLGLGVTEEDILAVAETLKLVLGVIEALMVGVTDEL
MLGVEEKLTLGLGDIEALELGVIDTLMLGVADKLALGLGVIEELMLGVAE
VLTLALGLIEALGLGEIEGLELGVADKLTLALGDMETLGVDVIEGLTLGV
GDTLILPLGVADALGLGVADKLMLGDALMLGDALMLGDELMLGDALMLGD
ALMLGDALMLGDALMLGDELMLGDALMLGDALMLGDELMLGDALMLGVAV
MLGDALMLGDALMLGVAVMLGDALMLGVAVMLGDALMLGDALMLGDELML
GDALMLGVAVMLGDALMLGDALMLGVAVMLGDALMLGVAVMLGDALMLGV
AVMLGDALMLGVAVMLGDALMLGVAVMLGDALMLGVAVMLGVAVMLGDAL
MLGDALMLGDELMLGDALMLGVAVMLGDALMLGVAVMLGDALMLGDALML
GDELMLGDALMLGVAVMLGDALMLGDALMLGVAVMLGDALMLGVAVMLGD
ALMLGVAVMLGDALMLGVAVMLGDALMLGDALMLGDALMLGDELMLGDAL
MLGDALMLGDELMLGDALMLGDALMLGDAPMLGDALMLGDALIV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf