Gchil6696.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6696.t1
Unique NameGchil6696.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length258
Homology
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BLAST of Gchil6696.t1 vs. uniprot
Match: A0A2V3ILU0_9FLOR (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILU0_9FLOR)

HSP 1 Score: 247 bits (631), Expect = 1.300e-78
Identity = 135/268 (50.37%), Postives = 174/268 (64.93%), Query Frame = 0 
Query:    2 GVPSKMSTTVRAD--------ETPEPEAPVIVIEEPSLPEETPPV---VAEEVPVPTMMETTXXXXXXPVAVPETLDEVMPSAEAXXXXXXXXXXVSESTASVP-FFAYNIGGDGFGQVQADPVQYVIGETLVFNMPEAVISGANPVLEEVYKSHRYGMLGSVWGYDLPVKQAGFYTCKLHYCETYSEFFTEEPNRTFEVTMVGDGEPDKVHRAEFDVMEELEGREFTAYDRTFQNIAVSSQLVLREKPSKSDAFLSGITCVWIAPLN 257
            G P ++  T R D        E P  E PV  +++P  PEE  P    +A E  VPT M +T       V   E LDE M + E           VS S+ ++P +F YNIGG  F +V+ADP +Y++GETL F MPEA+I+GA  V+ ++YKSHRYGMLGS+WGYD+PV+  G+Y C +HYCETYSE F  E  R FEVT++GD  P+  HR EFDVMEEL  +EFTAY+RTF+NIA+S  L +REKP+  DAFLSGI+C++ APLN
Sbjct:   21 GAPYRIDFTARNDGNTVPVVAEPPIVEMPVTELDDPITPEEAAPAADRMATEGAVPTTMPSTEEV----VMNIEPLDEPMSTPEEIEE-------VSNSSETIPHYFVYNIGGKSFDEVKADPTEYLVGETLAFEMPEAIIAGAKDVIADLYKSHRYGMLGSIWGYDIPVQYPGYYACSMHYCETYSENFVAESRRKFEVTIIGDASPETEHREEFDVMEELGYQEFTAYNRTFENIAISEILSIREKPTTGDAFLSGISCIYTAPLN 277
The following BLAST results are available for this feature:
BLAST of Gchil6696.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILU0_9FLOR1.300e-7850.37Malectin domain-containing protein n=1 Tax=Gracila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.430coord: 95..252
e-value: 8.5E-13
score: 50.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR021720Malectin domainPFAMPF11721Malectincoord: 134..231
e-value: 7.6E-9
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:381398..382171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6696.t1Gchil6696.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 381398..382171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6696.t1 ID=Gchil6696.t1|Name=Gchil6696.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=258bp
MGVPSKMSTTVRADETPEPEAPVIVIEEPSLPEETPPVVAEEVPVPTMME
TTTMAEETPVAVPETLDEVMPSAEAEAEAEAEAETVSESTASVPFFAYNI
GGDGFGQVQADPVQYVIGETLVFNMPEAVISGANPVLEEVYKSHRYGMLG
SVWGYDLPVKQAGFYTCKLHYCETYSEFFTEEPNRTFEVTMVGDGEPDKV
HRAEFDVMEELEGREFTAYDRTFQNIAVSSQLVLREKPSKSDAFLSGITC
VWIAPLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021720Malectin_dom