Gchil6690.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6690.t1
Unique NameGchil6690.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1364
Homology
BLAST of Gchil6690.t1 vs. uniprot
Match: A0A2V3ICP0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP0_9FLOR)

HSP 1 Score: 516 bits (1329), Expect = 2.360e-156
Identity = 326/818 (39.85%), Postives = 463/818 (56.60%), Query Frame = 0
Query:    1 MPAPTQHA-FSYAHAAQLLRSSRASPHEKIRVARDLLARTLIPHPTTLILEHLFYALKNSSSKPNDFVADYWLLLHDTLQNAALNSQYVPEFPDSLIEHAAAHIVQPACTTAVVEALGTVFKYPLPHSLQAFGTLLRNVATLLPGDSHIQSLATSALGMYGEMQRQEQDHKKMILICIPLLEPFLSSAELRESAEPVFRHAFFAEPNIARDPIISYIAECNSDDLATVCSFLLTAYTEAESHRAESLEVARQRAAVQKGSGQLKRIRQLVERPHVLRLFQDMVAALSVNLVHGELVCVARVRALRAVFVTACDLDMYRPNLEDVSAIQAEKKLKKGSESFGVHTVGLEIRQAFGAVCALAEQICSGRKSGDVMVVVETALAMVKLSVDTVDNVVPRLLTACGEGSFHDERRMLYSELLGIYARTRCVPKLIGYLKGAGDGFLFAKYESIFGDDDVRHVTAVTVYGLPQGQAVECIAAMGGEQIAVGEAQSVALLAALVLESSCDEKGVVVECVCDKVMGKIVRCQEEGSGGRNRCALLFLLSSVVLCIVKWKLGGSKSKAVEACVRSGVLQSVSGFPFGIDDLGDFAKKFGREAEKRAGDAVDACETLCTMRLAAALVHVGDAGG--GEDDATARQLLGVVFDGVERLKGEEVRGCEGVDGARLKALYNGVEFDKVAALVASVVDVMDHVGLE-RMVGGLERFLCSASAREGEYAALWADLLESATVQRWFGQVALGALKRAERAAAATAEVRGVLRLLARAPPGYLRHDRDARQVAAAVARLFEHLRGDERAMSAALQAALKLRRVGGAPAQALLEH 814
            MPAP Q   FSYA AA+LL+++R S  EK+R ARDLL R LIPHP  LIL H+FY LKNS  +P+D  + YW LLHDTL  A   S+YVPEFPD+L+ HAA HIVQP+CT AV +A+  +  +PLP SLQ FG LLRN+ +LLP    +  LA S L +YG++QRQEQDHKKMI IC+PLLEPFLSS+ LR  AEPV  HAFFA+PN++RD II Y+++   + L     FLL AY + E  R + LE  R+  +++  SG  KR R L E  HV R F+D+V+AL+ NLVH + + V R+ ALRA+F T+  LD+YR                     F VH+ G E ++   ++   +                     MVKLSVDTVD+++P LL +C      D R  ++ ELL +YA +R VP+   +     D  L   Y+SIF  DD+R   A+TV+ LP+GQA  CI  +    +   +AQSVA L+A+++E+S D+K  +++ VC++V+ KI   +E  S    RCA LFLLSS++  +VK  +      A +  ++ G++Q+  GFPFGIDD+ DF +KF    EK   + +D  E  C +RL + LVHV        ED A  R+L+ ++F  V+ L   E R     +       + G +FD++  LV  ++DV++      R   G  RFL     +      LW+D+LE   VQ  F ++  G L + ++ A A   +    +L+   P GY+    + R +   V R++  L  D    + AL   LK+ +      + ++E 
Sbjct:    1 MPAPEQEQPFSYAKAARLLQTARGSTDEKLRTARDLLKRKLIPHPAPLILSHIFYVLKNSPKEPDDQFSKYWALLHDTLHEAIRTSEYVPEFPDTLLRHAAEHIVQPSCTEAVAKAMTILLNFPLPQSLQDFGILLRNITSLLPLHPDLHVLALSVLKVYGQIQRQEQDHKKMISICLPLLEPFLSSSILRRPAEPVLTHAFFAQPNLSRDDIIVYMSKSVDEHLPETTHFLLNAYADTERRRTQELEENRRAISMRSKSGSSKRSRPLSELHHVQRFFRDLVSALAQNLVHEQSLSVPRINALRALFETSASLDLYRTQFR---------------RPF-VHSGGEETQERRPSIWTTS---------------------MVKLSVDTVDSILPTLLQSCCHRDHTDARGQVFHELLELYATSRAVPRFFNHFIKP-DCSLLGMYQSIFLHDDLRKSLAITVFRLPKGQAEHCIKTIAVGNMKSDDAQSVAFLSAIIMENSRDDKSQLIQVVCNEVVRKIASLEECRS---IRCASLFLLSSLLFAVVKANVTPDDD-AFQVLLKCGIMQAACGFPFGIDDITDFQRKF---VEKMEEEDLDPIEKYCCIRLLSVLVHVDVQQNVVQEDHAFIRRLIELLFTFVDALVPPEGR-----EQLVPNPFFEGSKFDEIVPLVVGMMDVIELTFQGYRTPHGFLRFLRFLVNKYPTVPDLWSDILEKKVVQDAFPKIIQGVLNKEKKDARANISLLATFKLILHTPSGYMPESEEKR-IEKCVRRMYSDL-SDNEERTEALNVLLKIGKCNPIKLKPIIEE 766          
BLAST of Gchil6690.t1 vs. uniprot
Match: A0A2V3IIQ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ3_9FLOR)

HSP 1 Score: 476 bits (1224), Expect = 6.800e-151
Identity = 257/513 (50.10%), Postives = 344/513 (67.06%), Query Frame = 0
Query:    1 MPAPTQHA-FSYAHAAQLLRSSRASPHEKIRVARDLLARTLIPHPTTLILEHLFYALKNSSSKPNDFVADYWLLLHDTLQNAALNSQYVPEFPDSLIEHAAAHIVQPACTTAVVEALGTVFKYPLPHSLQAFGTLLRNVATLLPGDSHIQSLATSALGMYGEMQRQEQDHKKMILICIPLLEPFLSSAELRESAEPVFRHAFFAEPNIARDPIISYIAECNSDDLATVCSFLLTAYTEAESHRAESLEVARQRAAVQKGSGQLKRIRQLVERPHVLRLFQDMVAALSVNLVHGELVCVARVRALRAVFVTACDLDMYRPNLEDVSAIQAEKKLKKGSESFGVHTVGLEIRQAFGAVCALAEQICSGRKSGDVMVVVETALAMVKLSVDTVDNVVPRLLTACGEGSFHDERRMLYSELLGIYARTRCVPKLIGYLKGAGDGFLFAKYESIFGDDDVRHVTAVTVYGLPQGQAVECIAAMGGEQIAVGEAQSVALLAALVLESSCDEKGVVVECV 512
            MPAP Q   FSYA AA+LL+++R S  EK+R ARDLL R LIPHP  LIL H+FY LKNS  +P+D  + YW LLHDTL  A   S+YVPEFPD+L+ HAA HIVQP+CT AV +A+  +  +PLP SLQ FG LLRN+ +LLP    +  LA S L +YG++QRQEQDHKKMI IC+PLLEPFLSS+ LR  AEPV  HAFFA+PN++RD II Y+++   + L     FLL AY + E  R + LE  R+  +++  SG  KR R L E  HV R F+D+V+AL+ NLVH + + V R+ ALRA+F T+  LD+YRP+ +D+S IQAEKKLKKG+++ GV  V  EIR+AF  VC     + S + + DV  +   A +MVKLSVDTVD+++P LL +C      D R  ++ ELL +YA +R VP+   +     D  L   Y+SIF  DD+R   A+TV+ LP+GQA  CI  +    +   +AQSVA L+A+++E+S D+K  +++ V
Sbjct:    1 MPAPEQEQPFSYAKAARLLQTARGSTDEKLRTARDLLKRKLIPHPAPLILSHIFYVLKNSPKEPDDQFSKYWALLHDTLHEAIRTSEYVPEFPDTLLRHAAEHIVQPSCTEAVAKAMTILLNFPLPQSLQDFGILLRNITSLLPLHPDLHVLALSVLKVYGQIQRQEQDHKKMISICLPLLEPFLSSSILRRPAEPVLTHAFFAQPNLSRDDIIVYMSKSVDEHLPETTHFLLNAYADTERRRTQELEENRRAISMRSKSGSSKRSRPLSELHHVQRFFRDLVSALAQNLVHEQSLSVPRINALRALFETSASLDLYRPSFDDLSFIQAEKKLKKGAQASGVRAVAQEIREAFRKVCKALLDLSSEKTATDVSPLCRAATSMVKLSVDTVDSILPTLLQSCCHRDHTDARGQVFHELLELYATSRAVPRFFNHFIKP-DCSLLGMYQSIFLHDDLRKSLAITVFRLPKGQAEHCIKTIAVGNMKSDDAQSVAFLSAIIMENSRDDKSQLIQVV 512          
The following BLAST results are available for this feature:
BLAST of Gchil6690.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ICP0_9FLOR2.360e-15639.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIQ3_9FLOR6.800e-15150.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 924..1079
e-value: 1.2E-6
score: 30.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 837..855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 831..855
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 389..1082

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:284982..289073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6690.t1Gchil6690.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 284982..289073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6690.t1 ID=Gchil6690.t1|Name=Gchil6690.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1364bp
MPAPTQHAFSYAHAAQLLRSSRASPHEKIRVARDLLARTLIPHPTTLILE
HLFYALKNSSSKPNDFVADYWLLLHDTLQNAALNSQYVPEFPDSLIEHAA
AHIVQPACTTAVVEALGTVFKYPLPHSLQAFGTLLRNVATLLPGDSHIQS
LATSALGMYGEMQRQEQDHKKMILICIPLLEPFLSSAELRESAEPVFRHA
FFAEPNIARDPIISYIAECNSDDLATVCSFLLTAYTEAESHRAESLEVAR
QRAAVQKGSGQLKRIRQLVERPHVLRLFQDMVAALSVNLVHGELVCVARV
RALRAVFVTACDLDMYRPNLEDVSAIQAEKKLKKGSESFGVHTVGLEIRQ
AFGAVCALAEQICSGRKSGDVMVVVETALAMVKLSVDTVDNVVPRLLTAC
GEGSFHDERRMLYSELLGIYARTRCVPKLIGYLKGAGDGFLFAKYESIFG
DDDVRHVTAVTVYGLPQGQAVECIAAMGGEQIAVGEAQSVALLAALVLES
SCDEKGVVVECVCDKVMGKIVRCQEEGSGGRNRCALLFLLSSVVLCIVKW
KLGGSKSKAVEACVRSGVLQSVSGFPFGIDDLGDFAKKFGREAEKRAGDA
VDACETLCTMRLAAALVHVGDAGGGEDDATARQLLGVVFDGVERLKGEEV
RGCEGVDGARLKALYNGVEFDKVAALVASVVDVMDHVGLERMVGGLERFL
CSASAREGEYAALWADLLESATVQRWFGQVALGALKRAERAAAATAEVRG
VLRLLARAPPGYLRHDRDARQVAAAVARLFEHLRGDERAMSAALQAALKL
RRVGGAPAQALLEHFELLLGGDDDALDALLAGMRDGGGDDDDDDDDDDDD
DAGANDDALLSVAQRALRSAAASCVRSAHSKMPLCARVVRVAHALLRDAH
TPAALARDALRVVHTVVRAARAPCRAVLRVKGSEPSRVCHALRVVAEVLR
VLAVLHVHGARGRRASAACHKLLRRSLPSAATLSVHLLLQPHRHLDDDDD
DDDDDAPATAAAAAAELLRACARCAHAHLAPRLVAAALAMLAAGREPART
AAVHLLGDLGAAPPAVADLAAVAACAALRRQLDVSPNRTSPTRLRHLRDC
ALAAAAPLCAAAAPAAPPVVRLDARQHFEGFVSARLRRHRHAARLSRRAT
EQVLGVLADTAECAAQSAPHSVAAVTDAHAILHHALCAAELAIARRPPHR
PATPALHHVVAIVAAALRVSSAAAARAPEQSVAARALALCALMLRVPRAA
PVHLALIAVLRGAPRRAAHDAWPQSSVRALAAALREATNVPFASALAGEA
IAVLAIATRPVLRRALLPAVGKLLVDADELAVARALPVAAQDAERDVARA
ALAEARAARYRGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold