Gchil6689.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6689.t1
Unique NameGchil6689.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length230
Homology
BLAST of Gchil6689.t1 vs. uniprot
Match: A0A2V3IIN8_9FLOR (MRN complex-interacting protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIN8_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 3.000e-31
Identity = 102/230 (44.35%), Postives = 128/230 (55.65%), Query Frame = 0
Query:    4 FVAVQCFRCHQLQVSQRRRDSRFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARGLAAERYDDEYPPELQSEXXXXXXXXXXXXXXXXXGRERDAQHCCEVPAAFRPCSQLPSRWRSRAAAVECAIAAPSPEEAQLSEDD--VVTALPDAARGRQ---CGRKRAFRKRTPNNPSLTALKDERPTSRRRTSAPYALVSKPPVADSKQFFDEGIVTRPDDEEYQEEVW 228
            F+AVQCF+C Q QV+Q+R+DSRFVCKLC A+QS+RKV A S RAA++RPFVQ+ NL RGLAAERYD    P          XXXXXXXXXXXX  ++ A      P+ +R  S L +  + R+ + EC    P+P+  Q    D   VT LPDA   R+     RKR  +   PN  +        PT RRR + P A   K P A +  F        P DE Y E+ W
Sbjct:    4 FLAVQCFQCSQAQVAQQRKDSRFVCKLCAAKQSVRKVLARSSRAADVRPFVQRFNLQRGLAAERYDHHIHPTQARSPPASPXXXXXXXXXXXXQLKQPA------PSRWRIYSALVASRKERSPSPECQ---PNPDSEQFPVPDHLFVTVLPDATAARRQKASSRKRHRQNAYPNVDNTQPASTHPPTRRRRINLPDASPPKSP-APAHSFDSNHCTVLPGDEPYHEQTW 223          
BLAST of Gchil6689.t1 vs. uniprot
Match: F4Q023_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q023_CAVFA)

HSP 1 Score: 68.2 bits (165), Expect = 1.070e-9
Identity = 30/69 (43.48%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 MVQFVAVQCFRCHQLQVSQRRRDSRFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARGLAAERYD 69
            MV+++ +QC+ CH  Q++Q+ + S+F CK+C  +QS++K++A S +  +LRP VQK NL  GL  E  D
Sbjct:    1 MVEYILLQCYSCHTFQINQKTKVSKFQCKICNEKQSVKKIYAISNQPKDLRPLVQKYNLEGGLKREEAD 69          
BLAST of Gchil6689.t1 vs. uniprot
Match: A0A7S0BU63_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BU63_9RHOD)

HSP 1 Score: 62.8 bits (151), Expect = 1.530e-8
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    4 FVAVQCFRCHQLQVSQRRRDSRFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARGLAAERYDD 70
            ++ V CF C   Q S  RRD +FVCK+CG +QS+RK+ A S  A ++RP VQK N +R    +  ++
Sbjct:    3 YICVLCFSCRTFQASTLRRDRKFVCKVCGIKQSVRKIIAQSHAAKDIRPVVQKLNRSRDSTGDESEE 69          
BLAST of Gchil6689.t1 vs. uniprot
Match: A0A843WEN9_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843WEN9_COLES)

HSP 1 Score: 59.3 bits (142), Expect = 5.170e-7
Identity = 30/64 (46.88%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    4 FVAVQCFRCHQLQVSQRRRDS-RFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARGLAAE 66
            F+A+QC +C  +QV Q++R S ++VC +C  RQS+RK+FA S  A ++R FVQ+ N++R  A E
Sbjct:    7 FIALQCCQCSTMQVKQQKRSSNKWVCAVCNQRQSVRKIFARSCLARDVRGFVQRFNMSRMTAGE 70          
BLAST of Gchil6689.t1 vs. uniprot
Match: UPI001EE5DDD3 (MRN complex-interacting protein-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5DDD3)

HSP 1 Score: 56.6 bits (135), Expect = 1.100e-6
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    4 FVAVQCFRCHQLQVSQRRRDSRFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARG 62
            F  VQC+ CH  QV QR++ +++VCK+CG +QS++KV+      A+ R  VQK N  RG
Sbjct:    6 FQVVQCYSCHTFQVQQRKKVNKWVCKMCGEKQSIKKVYGEGS-GADCRVHVQKLNTLRG 63          
BLAST of Gchil6689.t1 vs. uniprot
Match: A0A7I8J7L1_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8J7L1_SPIIN)

HSP 1 Score: 57.0 bits (136), Expect = 1.850e-6
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    4 FVAVQCFRCHQLQVSQRRRDS-RFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARGLAAE 66
            F+A+QC  C  +QV Q+++ S ++VC +C  RQS+RKVFA S  A ++R FVQ+ N++R    E
Sbjct:    7 FIALQCSDCSMMQVKQQKKSSNKWVCAVCNQRQSVRKVFARSCLARDVRGFVQRFNMSRSSTGE 70          
BLAST of Gchil6689.t1 vs. uniprot
Match: A0A7I8KYX8_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KYX8_SPIIN)

HSP 1 Score: 57.0 bits (136), Expect = 3.550e-6
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    4 FVAVQCFRCHQLQVSQRRRDS-RFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARGLAAE 66
            F+A+QC  C  +QV Q+++ S ++VC +C  RQS+RKVFA S  A ++R FVQ+ N++R    E
Sbjct:    7 FIALQCSDCSMMQVKQQKKSSNKWVCAVCNQRQSVRKVFARSCLARDVRGFVQRFNMSRSSTGE 70          
BLAST of Gchil6689.t1 vs. uniprot
Match: A0A7S3PL25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PL25_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.440e-6
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    1 MVQFVAVQCFRCHQLQVSQRRRDSRFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARG 62
            MV ++ VQC  C+  Q  Q  +  +F+C++C  + SLR+V+ASS +A E+RP  Q  N+ RG
Sbjct:    1 MVNYIVVQCGECNVFQCIQAPKSKKFLCRVCNEKNSLRRVYASSNKAREIRPICQLLNVKRG 62          
BLAST of Gchil6689.t1 vs. uniprot
Match: UPI001EB072F2 (uncharacterized protein LOC124143799 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB072F2)

HSP 1 Score: 56.6 bits (135), Expect = 8.370e-6
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    4 FVAVQCFRCHQLQVSQRRRDSRFVCKLCGARQSLRKVFASSMRAAELRPFVQKRNLARG 62
            F  VQC+ CH  QV QR++ +++VCK+CG +QS++KV+      A+ R  VQK N  RG
Sbjct:    6 FQVVQCYSCHTFQVQQRKKVNKWVCKMCGEKQSIKKVYGEGS-GADCRVHVQKLNTLRG 63          
The following BLAST results are available for this feature:
BLAST of Gchil6689.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IIN8_9FLOR3.000e-3144.35MRN complex-interacting protein n=1 Tax=Gracilario... [more]
F4Q023_CAVFA1.070e-943.48Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
A0A7S0BU63_9RHOD1.530e-843.28Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A843WEN9_COLES5.170e-746.88Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
UPI001EE5DDD31.100e-645.76MRN complex-interacting protein-like n=1 Tax=Halio... [more]
A0A7I8J7L1_SPIIN1.850e-645.31Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A7I8KYX8_SPIIN3.550e-645.31Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A7S3PL25_9STRA5.440e-641.94Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
UPI001EB072F28.370e-645.76uncharacterized protein LOC124143799 n=1 Tax=Halio... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032739MRN complex-interacting proteinPFAMPF15749MRNIPcoord: 7..83
e-value: 7.7E-17
score: 62.0
IPR032739MRN complex-interacting proteinPANTHERPTHR15863MRN COMPLEX-INTERACTING PROTEINcoord: 2..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:283012..283701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6689.t1Gchil6689.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 283012..283701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6689.t1 ID=Gchil6689.t1|Name=Gchil6689.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=230bp
MVQFVAVQCFRCHQLQVSQRRRDSRFVCKLCGARQSLRKVFASSMRAAEL
RPFVQKRNLARGLAAERYDDEYPPELQSEPEPEPECDADADVGADAGRER
DAQHCCEVPAAFRPCSQLPSRWRSRAAAVECAIAAPSPEEAQLSEDDVVT
ALPDAARGRQCGRKRAFRKRTPNNPSLTALKDERPTSRRRTSAPYALVSK
PPVADSKQFFDEGIVTRPDDEEYQEEVWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032739MRNIP