Gchil6688.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6688.t1
Unique NameGchil6688.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length453
Homology
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A2V3ILC3_9FLOR (BHLH domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILC3_9FLOR)

HSP 1 Score: 469 bits (1208), Expect = 1.690e-160
Identity = 302/456 (66.23%), Postives = 336/456 (73.68%), Query Frame = 0
Query:    1 MAHYAPDAAESLDMLADVSHHGAS-FFELFAADR-DPAHRAVNLDPTALPNPEPAAVSALPPLLSHHHLSVSSAFSH--PPLSAPPSVTHVSLAHVSPPPASIARKRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPTSSQPLSSPVPHRPHFSNHDSGAINPLLKDTHNSHTRKCRAKVNSKFQELLSILPPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDDPDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGASAMKRVNFR 452
            M+H+ PDAA+  D+LADVSHHGAS FF+LFA+   DP  R  NLD   L  P   A S+ P  +SHH    S+A SH   P +                      KRR+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                      TRKCRAKVNSKF+ELL ILP PP+NTGIKHKAQIL+YTIRV+RDIHARKTLLEAELALSS  QL+AW+++IVSRS S+QDALAPYLSLIC KG WKYSEAWVP  EP  + TN  QL A+TGES+ LT +NMLLGP+ +LRLGLAVIPSLGNTDDPDL PKLERFRDRSRPYTCK RVDLPGRIMCTMRPEWLPSLEDHEAFQR+KLARDASLVVCFGVP+FI  HVAAVAVF+DTDQRT+DAKC+DLAV VA +LG+ YGASAMKRVN+R
Sbjct:    1 MSHHVPDAAD-YDLLADVSHHGASSFFDLFASTPLDPPPRP-NLDAPYLATP--TAFSSAPHFISHHDHPSSNALSHVTAPTAXXXXXXXXXXXXXXXXXXXXXXKRRSSSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------TRKCRAKVNSKFKELLGILPAPPANTGIKHKAQILEYTIRVYRDIHARKTLLEAELALSSPSQLNAWISNIVSRSRSLQDALAPYLSLICTKGAWKYSEAWVPLQEPESNTTNDSQLRAITGESRFLTPANMLLGPNARLRLGLAVIPSLGNTDDPDLQPKLERFRDRSRPYTCKPRVDLPGRIMCTMRPEWLPSLEDHEAFQRAKLARDASLVVCFGVPIFIGDHVAAVAVFYDTDQRTYDAKCLDLAVRVARMLGSAYGASAMKRVNYR 445          
BLAST of Gchil6688.t1 vs. uniprot
Match: R7QJ09_CHOCR (BHLH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ09_CHOCR)

HSP 1 Score: 424 bits (1090), Expect = 1.410e-144
Identity = 208/274 (75.91%), Postives = 232/274 (84.67%), Query Frame = 0
Query:  175 KDTHNSHTRKCRAKVNSKFQELLSILPPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDDPDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGASAMKR 448
            KDTHNSHTR+CRAKVN KFQELLSILP PP  TGIKHKAQILDY IRV+RDIHARKTLLEAELALSSR QL+AWV+ IV RS+S+QDALAPYLSLIC KG WKYSEAW+P  +P PS     ++ AV+GES VLT + +L GP  +LRLGLAVIPSLGNTDDPDL  KLERFRD+SR Y CKARVDLPGR+MCTMRPEWLPSL D EAFQR+ LA +A+LVVCFGVPVFI GH+AAVAVFFDTDQR +DAKCVDLA  ++ LLGN +GAS   R
Sbjct:   41 KDTHNSHTRRCRAKVNLKFQELLSILPTPPPKTGIKHKAQILDYAIRVYRDIHARKTLLEAELALSSRSQLNAWVDGIVLRSISLQDALAPYLSLICTKGGWKYSEAWIPAQQPIPSQPVRGKVEAVSGESNVLTPTTLLSGPTARLRLGLAVIPSLGNTDDPDLQTKLERFRDKSRAYQCKARVDLPGRVMCTMRPEWLPSLNDQEAFQRAHLAHNANLVVCFGVPVFICGHIAAVAVFFDTDQRAYDAKCVDLADNISGLLGNAFGASTKFR 314          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A1X6PIG4_PORUM (BHLH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIG4_PORUM)

HSP 1 Score: 230 bits (586), Expect = 5.700e-65
Identity = 132/328 (40.24%), Postives = 184/328 (56.10%), Query Frame = 0
Query:  170 INPLLKDTHNSHTRKCRAKVNSKFQELLSILPPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQ--------QLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDD---------------------------------------------PDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGAS 444
            +  + KD HNSHTRKCRAKVN+KF ELL++LPP P +  +KHKAQILDYTI +++ I ARK  LEAELALS+R  L+AWV+++V+ S ++ +AL PYL LI  +  ++Y+E W+P  +PT +   +          L   +G+S VLT S  L+ P        A +P+ G TD+                                              +    +E FRD +       RV +PGR+ C+MRPEWLP L D  AF R++ A ++ L +C  VPV + G VAAVA FFDT +R +DA  V LA +VA+L+GN +GA+
Sbjct:  335 VRGMRKDVHNSHTRKCRAKVNTKFDELLTLLPPHPDSFQVKHKAQILDYTIHMYKRIQARKNQLEAELALSTRANLAAWVDTVVASSRTLPEALRPYLHLIAVQKRFRYAELWLP--QPTKAEGMAAAKKAGANASLSLPSGDSIVLTRSMALVLP--------APVPTAGQTDELSVGLGAPTGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEENTTRAIEAFRDATASCVVPPRVGMPGRVYCSMRPEWLPMLSDPHAFIRAEYAANSKLSMCLAVPVLLCGRVAAVAAFFDTGKRPYDASVVGLAHDVANLVGNAFGAA 652          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A7S1TET1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TET1_9RHOD)

HSP 1 Score: 206 bits (525), Expect = 3.630e-57
Identity = 114/276 (41.30%), Postives = 156/276 (56.52%), Query Frame = 0
Query:  175 KDTHNSHTRKCRAKVNSKFQELLSILPPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTD-DPDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGASAMKRV 449
            K+ H SHTR+CR KVN KFQ L++ LPPPP+ T IKHKAQILDY+IRV +D+ +RK  LE+ELALS+R  L  WV+ +V+ +    DA+ P+L ++C+K  WK +E WVP                   E +V+  S  L   +T  RL L       N + DP    ++  F D SR +        PGR+  TMRPEWL  L D + F R++LA  A LV C  +P  I G V  V   +D ++R  D   +DLA ++A L+GN +GA   + V
Sbjct:  264 KEVHKSHTRRCREKVNEKFQTLMNELPPPPTGTEIKHKAQILDYSIRVLKDLASRKAALESELALSNRRNLLGWVDRVVNDAEDFPDAINPFLKMMCSKKAWKCAELWVPV------------------EERVMV-SCPLPQSETPTRLKLLRASFHENLEQDPPRHHRIHEFIDESRRFKFTPTCGSPGRVYSTMRPEWLHDLSDEQVFPRAELASKAGLVTCLSIPFLINGRVRGVVCLYDDEKRECDMGDLDLAFDIAILIGNAFGARGNRAV 520          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A2V3J090_9FLOR (BHLH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J090_9FLOR)

HSP 1 Score: 176 bits (447), Expect = 2.750e-47
Identity = 96/264 (36.36%), Postives = 143/264 (54.17%), Query Frame = 0
Query:  180 SHTRKCRAKVNSKFQELLSILPPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDDPDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGA 443
            SHTR+CRAK+N+ F  LL +LP PP    +KHKAQIL Y I  +R +  +   LE  LALSSR  +  WV S+V  S +++D+L  ++++IC    WKY+E W P    TP++++S  L   +G                          +L  T + + + +L+ +R +SR YT   R  +PGR+  TMRPEWLP L D  AF R+  A    + V F VPV + G V  V  F+DT +R ++   +++  E+A + G  + A
Sbjct:  141 SHTRRCRAKLNTNFDRLLQVLPKPPPGVEVKHKAQILQYAIDHYRHVRCKNVKLEMTLALSSRSHMHRWVQSVVHTSPNLRDSLKSFMAMICLTKNWKYAELWSPH---TPTDSSSVALTYASG--------------------------ALPPTVEGEELHRLKAYRVKSRKYTFAPRSGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNRVEVTFAVPVVVNGSVKMVVQFYDTYRRDYEPATLNMTNEIAAMFGKAFTA 375          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A2V3J1B9_9FLOR (GAF domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1B9_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 1.750e-31
Identity = 93/278 (33.45%), Postives = 124/278 (44.60%), Query Frame = 0
Query:  180 SHTRKCRAKVNSKFQELLSILPPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSR------------SLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDDPDLIPKLERFRDRSRPYTCKARVDLPG---RIMCTMRPEWLPSLEDHEA-FQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTY 441
            SHTR+CR KV  +F+ LL +LPPP     ++HKAQILDYTI VFR + AR+T L   +AL+S   L  W NS + R            S SI   L P++   C K +W Y+E W+                               L PDT+     A+     N+DD ++   L+ F   S+     A   + G   R   T RPEWL  + D +  F R+ LA    + +   VPV       AV VF  T  RTF A  VD     A +LG  +
Sbjct:  227 SHTRRCREKVTRQFEHLLEVLPPPSRGVEVRHKAQILDYTINVFRSLLARRTFLHTHIALASNHTLRQWANSTLLRASAAVKSDSFAQSPSIASLLHPFMRFYCVKNSWSYAETWI-------------------------------LTPDTK---HAALHSCFVNSDDSNVSKNLDAFATASKARYGAASEIVSGVVSRARQTKRPEWLVDIADDQCVFDRAALAAQHDVQIALAVPVVAENMCLAVIVFAHTTPRTFSAAEVDQLFGFAFILGQRF 470          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A2V3IQR8_9FLOR (BHLH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR8_9FLOR)

HSP 1 Score: 124 bits (311), Expect = 6.210e-28
Identity = 92/298 (30.87%), Postives = 134/298 (44.97%), Query Frame = 0
Query:  151 PLSSP--VPHRPHFSNHDSGAINPLL--KDTHNSHTRKCRAKVNSKFQELLSILPPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDDPDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPS-LEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGA 443
            P S+P  + + P   +  SG  +P    ++ HN+HTR+CRA++N +F  L +ILP  P+   +KHK  ILD+ I   +++H +   L+  LAL SR +L  WV+S V  + SIQ AL P++SL+C    W Y+E W    +P   N       A T     L     +    TQL                        F D           D  G+   T  P W  S ++  +  QR++L   A +   F VP+ + G V+ V  FFD  QR  D   V  A   A  +GN + A
Sbjct:  120 PQSTPTIITNNPENQSITSGHASPTQQRRNHHNTHTRRCRARLNGRFDTLNNILPRSPT-VEVKHKVHILDHAITALQEMHQQNANLQLLLALRSRPRLVKWVDSFVPTASSIQQALDPFISLVCHTAAWPYAEVW--HAQPPHINLIHTSPRATTMHFPALNHLAHVSAAQTQLC-----------------------FAD-----------DFVGKCFETRVPRWSCSPVQQCQVAQRAQLLAAARIQCAFAVPIPVAGDVSHVVAFFDVRQRERDTTQVQFAAFAAVCVGNAWAA 380          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A7S0G5I3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5I3_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 4.970e-25
Identity = 81/283 (28.62%), Postives = 128/283 (45.23%), Query Frame = 0
Query:  172 PLLKDTHNSHTRKCRAKVNSKFQELLSILPP--PPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHAVTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDDPDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGASAMKRVNFR 452
            P  K+ H  H++K RA V  KF++L SIL          IK+K+QIL+  + + +D+    ++LE E+A+SSR  L  W+   V+ +    +AL P + ++C K +WKY E W P                +  E+ VL                + ++ S      P +   LE F  RS        + L GR+  +MR E +  + +   F R+ LA    +     +P+ + G  + V +F+DTD R FD   + LA  +A  +G   GA  M R   R
Sbjct:   19 PARKNWHKDHSKKYRANVGEKFKQLSSILETIGGKDEASIKYKSQILENAVDLVKDLREDVSVLEVEVAMSSRKFLMDWIERSVTGADKPSNALQPLVEIVCRKCSWKYVEVWEP----------------IESEADVLE---------------IGLVSSFVRVKSP-VARDLETFGKRSSSVLFNPGLGLVGRVWNSMRGELVSDVCEPSMFLRANLAMCKGISSSIAIPIVVLGRTSTVVIFYDTDSR-FDNHSLRLAESIAVSIGTVCGAK-MNREGLR 267          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A1X6NTH0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTH0_PORUM)

HSP 1 Score: 106 bits (264), Expect = 8.900e-21
Identity = 78/293 (26.62%), Postives = 120/293 (40.96%), Query Frame = 0
Query:  206 NTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPK---------------LEPTPSNTNSQQLHAVTGESQVLTASNMLLG----------------------PDTQLRLGLAVI------PSLGNTDD----------------PDLIPKLERFRDRSRPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGVPVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGN 439
            +  ++ KAQ+LDY     R  +AR+  L A +A SS    ++WV   V+ S ++   L  +++L+C +  WKY+E W P+                                G  +++ A   L+G                      P   LR G +V+      P L    +                P+   +L  FR+ S+ +T    V LP R+  ++RPEW   L  H  F R++LA +  L V    P+  RG V AVA+FF T  R +DA  V     +A +LGN
Sbjct:  504 HVDLRFKAQLLDYAAVCLRAAYAREAALRAAVATSSPAATASWVRRTVASSDTVPRVLMHFMALVCTRRRWKYAEMWFPEGGAXXXXXXXXXXXXXXXXXXXXXXXXXXTGGGPHRLVPADEQLVGAPRRGRXXXXXXXXXXXXXXXXPPLVLRYGQSVVVDDDEWPHLPGDAEASPPAXXXXXXXXXXXPNGAGRLAHFREASKAHTFPPGVGLPARVAASLRPEWAADLPTHPGFVRARLAGECGLSVALAEPLLARGRVRAVALFFATAPRPYDAAGVASVHAIAGVLGN 796          
BLAST of Gchil6688.t1 vs. uniprot
Match: A0A7S3A6J3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A6J3_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 1.090e-12
Identity = 39/113 (34.51%), Postives = 63/113 (55.75%), Query Frame = 0
Query:  172 PLLKDTHNSHTRKCRAKVNSKFQELLSILPP--PPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVNSIVSRSLSIQDALAPYLSLICAKGTWKYSEAW 282
            P  K+ H  H++K RA V  KF++L S+L          IK+K+QIL+  + + + +    ++LE E+A+SSR  L  W+   V  +    +AL P + ++C K +WKY E W
Sbjct:   19 PARKNWHKDHSKKYRANVGEKFKQLSSVLETIGGKDEASIKYKSQILENAVDLVKVLREDVSVLEVEVAMSSRKFLMDWIERSVIAADKPSNALQPLVEIVCRKCSWKYVEVW 131          
The following BLAST results are available for this feature:
BLAST of Gchil6688.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3ILC3_9FLOR1.690e-16066.23BHLH domain-containing protein n=2 Tax=Gracilariop... [more]
R7QJ09_CHOCR1.410e-14475.91BHLH domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6PIG4_PORUM5.700e-6540.24BHLH domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S1TET1_9RHOD3.630e-5741.30Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3J090_9FLOR2.750e-4736.36BHLH domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3J1B9_9FLOR1.750e-3133.45GAF domain-containing protein n=1 Tax=Gracilariops... [more]
A0A2V3IQR8_9FLOR6.210e-2830.87BHLH domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S0G5I3_9RHOD4.970e-2528.62Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NTH0_PORUM8.900e-2126.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3A6J3_9RHOD1.090e-1234.51Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 174..244
e-value: 5.0E-6
score: 28.5
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 175..239
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 245..444
e-value: 1.7E-6
score: 29.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 176..224
e-value: 2.0E-4
score: 21.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 173..226
score: 10.149934
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..133
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 359..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:281288..282646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6688.t1Gchil6688.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 281288..282646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6688.t1 ID=Gchil6688.t1|Name=Gchil6688.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=453bp
MAHYAPDAAESLDMLADVSHHGASFFELFAADRDPAHRAVNLDPTALPNP
EPAAVSALPPLLSHHHLSVSSAFSHPPLSAPPSVTHVSLAHVSPPPASIA
RKRRAPSSAPPPATSTKRRKPRSASSASLSVKLEEETEASDASVPPTSSQ
PLSSPVPHRPHFSNHDSGAINPLLKDTHNSHTRKCRAKVNSKFQELLSIL
PPPPSNTGIKHKAQILDYTIRVFRDIHARKTLLEAELALSSRVQLSAWVN
SIVSRSLSIQDALAPYLSLICAKGTWKYSEAWVPKLEPTPSNTNSQQLHA
VTGESQVLTASNMLLGPDTQLRLGLAVIPSLGNTDDPDLIPKLERFRDRS
RPYTCKARVDLPGRIMCTMRPEWLPSLEDHEAFQRSKLARDASLVVCFGV
PVFIRGHVAAVAVFFDTDQRTFDAKCVDLAVEVADLLGNTYGASAMKRVN
FR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR029016GAF-like_dom_sf
IPR011598bHLH_dom