Gchil6686.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6686.t1
Unique NameGchil6686.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length845
Homology
BLAST of Gchil6686.t1 vs. uniprot
Match: A0A2V3IIN5_9FLOR (TACC_C domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIN5_9FLOR)

HSP 1 Score: 659 bits (1701), Expect = 3.000e-223
Identity = 469/865 (54.22%), Postives = 583/865 (67.40%), Query Frame = 0
Query:    1 MASSSDSPDVIFREKAAPTPTFEGVPIPAALQELRAAENQSASSKPSEMTALANKLRMFHIDSPPDSSDF----AKVAAAKRKEIIESQRHETLGDKENFYAETQKEGHILKGINLFHSPTAA-------------GDGTGTLSLRGNKQESSEYGSEFKLQEDSSSTDL-LPTPEDVSAKRSFVAAESAHTPSMNNSHGSKESHCRERTDSGRRTDALVEKNGHNCRTEGHGVFESANFESDLRKILEGKDKWSWPNRKDALLTLSKAVNVHPKEADQVLRECISKFSTTMNDHLEELRPTVITSALGLIDAIVVKRLGTASEFSKEVFPSVMDVACGRSLTAESAARTLVHMLNYDKRLATNLRDADNSERLMQLVNQLIESRDNITSQNASVAMEHLRKELPNALPSPARPISAPDTTPAGTNARADGTSGSM---PSFGQGNLSARSTPNLGRRLASLRSKNLRTPSSKVPLETSGQIASL-RGNNTDFSSKIGEPSTLDFRSGSHVLKNMKLGDSVRKASPQSTRSGRVYSEEEVESIRRHSVRIAVEKFKTSHAKELQKRAREMDDMRQKLQREHAEVEDLRAVLEEFELTMKKMVSEGNSKANAQQIILETEKSKLKAELIERSDAFEKLKEKYENAKEAIVVYENKESRFVDQIKELKRNMVELQKWSNDLKANSEKKLSKAFESVTAYRASYIDKXXXXXXXXXXXXXXXXELEKAQQSHAETAAKFATVESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLRTQVAGLKEKAQQLSDVEKRLETLTIERQSLKARAYDDMMRMRELEDQLDAKCRECDELNQICEEVMSQLEHSRTDG 843
            MASSSDSPD+IFREKAAP PTF+GV +PAAL+ELR+ EN   S   SEMTALA K R  ++ + P  SD      +  AA     +  ++H    +KEN  +E  K   IL GI+LF S                       +S  GN ++  +      L   SS   L L + E    K +FV  E ++ PS  + HG   +  R+       TD L               F  ++FE+DLRKILEGK KWSWP RKDALL+L+K V + PKEADQ+L   I+ F++ ++DHLEELRPTVITSAL LI+ IV+++L  A+EF+ EVFPSVMDV CGRSLTAESAA+TLVH+L +D++LATNLRDADN ERL+QL+ +L ES D    + A  A+  +R E+ + L +P+RP S P     G+ A   G +  +     F  G +SARSTPN+ R +   +S  LR      P     + +S  R  N    +   E   LD RSG+ VL+NMKL DSVRK SP  +R GR++SEE+VE I+ +SV + V+K K SH+KELQ+R+R++DDM +KL+RE AEV++LR+VLE+++LTMKKMVSEGNSKANAQQI+LE EK+KLKAEL+ERSDAFEKLKE+YENAKEAIVVYENKE+RF++QIKELKRNMVELQKWSNDLKANSEKKL+ AFESVTAYRASYIDK                ELEKAQQSHAETAAKFA +E  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +   +LS+VEK LE  T+E Q+LKARAYDDM+R+RELED L+AK +ECDEL++ C E+M +LE S   G
Sbjct:    1 MASSSDSPDIIFREKAAPLPTFDGVALPAALRELRSTENNRPSPPSSEMTALAQKFRSVYLHATPQKSDSDIRQIEEHAAPTNSHVSQEKH---SEKENEPSE-MKRNKILNGIDLFQSEKETEMDYEMAAVHKSHDSRFQDVSSAGNVEKPPQIAPNNALDSKSSRPPLGLQSAE---RKGNFV--EKSNVPSGKD-HGEDSAKSRQAN-----TDNLTNP------IPSPSAFVPSSFEADLRKILEGKKKWSWPQRKDALLSLAKTVAMVPKEADQILGRSINAFASAISDHLEELRPTVITSALDLINIIVLRKLSMANEFANEVFPSVMDVVCGRSLTAESAAKTLVHLLQFDEKLATNLRDADNPERLLQLITKLAESGDISVKEGACKAIVAIRSEVSSGLRTPSRPTSIPTNASPGSIATEIGKAEVLNPESGFRSGRISARSTPNIRRVMGLRKSSVLRNLQGVRPSTDLLEYSSATRSGNYKSMTPGSELLPLDVRSGASVLRNMKLSDSVRKISPSPSR-GRMFSEEDVEVIKNNSVALVVDKLKASHSKELQRRSRDVDDMHKKLKRERAEVQELRSVLEQYQLTMKKMVSEGNSKANAQQILLEKEKNKLKAELLERSDAFEKLKERYENAKEAIVVYENKENRFIEQIKELKRNMVELQKWSNDLKANSEKKLTIAFESVTAYRASYIDKEAHANKALSDLERTTAELEKAQQSHAETAAKFAQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRARLSEVEKTLEGYTVEGQTLKARAYDDMIRIRELEDNLEAKNKECDELHEFCNEIMERLERSEMKG 843          
BLAST of Gchil6686.t1 vs. uniprot
Match: R7QI72_CHOCR (TACC_C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI72_CHOCR)

HSP 1 Score: 320 bits (821), Expect = 2.230e-92
Identity = 311/925 (33.62%), Postives = 476/925 (51.46%), Query Frame = 0
Query:    5 SDSPDVIFREKAAPTPTFEGVPIPAALQEL-RAAENQSASSKPSEMTALANKLRMFHIDSPPDSSDFAKVAAAKRKEIIESQRHETLGDKENFYAETQKEGHILKGINLFHSPTAAGDGT---GTLSLRGNKQESSEYGSEFK----------LQEDSSSTDL-----------LPTPEDV----SAKRSFVAAESAHTPSMNNSHGSKESH---CRERTDSG------------------------------RRTDALVEKNGHNCRTEG----HGVFESANFESDLRKILEGKDKWSWPNRKDALLTLSKAVNVHPKEAD-QVLRECISKFSTTMNDHLEELRPTVITSALGLIDAIVVKRLGTASEFSKEVFPSVMDVACGRSLTAESAARTLVHMLNYDKRLATNLRDADNSERLMQLVNQLIESRDNI--TSQNASVAMEHLRKELPNALPS-PARPISAPDTTPAGTNARADGTSGSM-PSFGQGNLSARSTPNLGRRLASLRSKNLRTPSSKVPLETSGQIASLRGNNTD------FSSKIGEPSTLDFRS---------------GSHVLKNMKLGDSVRKASPQSTRSGRVYSEEEVESIRRHSVRIAVEKFKTSHAKELQKRAREMDDMRQKLQREHAEVEDLRAVLEEFELTMKKMVSEGNSKANAQQIILETEKSKLKAELIERSDAFEKLKEKYENAKEAIVVYENKESRFVDQIKELKRNMVELQKWSNDLKANSEKKLSKAFESVTAYRASYIDKXXXXXXXXXXXXXXXXELEKAQQSHAETAAKFATVESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLRTQVAGLKEKAQQLSDVEKRLETLTIERQSLKARAYDDMMRMRELEDQLDAKCRECDELNQICEEVMSQLE 837
            S  PD+  R  + P PTF G+ +P  L+ L +  E   ++  PSE+TALA +L+   +D  P         AA +   ++   H    DKEN        G  +  +    +P   G G       S  G K  +S + S+ +          LQE+ +++D+            PT + +    +A+R+    +   TP  +NS  S  +H   C+   D+                               + T   +E+   + ++E         ESA     L+ +LEGKDKWSWP R +A+ T+S+A+   P + D   +RE ++  S  +ND+L+ELRP++I SAL LI++++  +    S F+++VFPSVMD++CGRSLTA  AAR +  ML     L+  L DADN +RL++L+   ++    +  T   A +A+  + + +   +   P  P      TPA  N     ++ S+ P     N   +++P    R+ S      +T SS     T  +I S  G++        FS ++G  S+ +F++                + +++N KLG+S+RK SP S R  R Y+EE++   R  ++R+ +E+     AK   +  +E  ++ +K  +E +   +L +VL E+E TM+KM+S+GNS+A+A    LE E  +LKAEL+E ++A+E +KE+Y+N K+AI VYENKE+RF++QI+ LK+N+ ELQKWS+DLK N EKKL+ AF  VT +RASY++                 EL K+    A+  A  +T+E+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              RQ+LKARAYDD+ R+RELE++L  K RE ++L+ +C+E  SQLE
Sbjct:    7 SPDPDISIRTPSRPLPTFSGLTLPTPLRALYKHHEGALSTPHPSELTALATRLKSIRLDVSPTPDPNEPERAAPKPTKLDFGEH-VESDKENV-----DNGRRVDHVKPPRTPKRVGSGLFAGSPASDIGEKLRASLHNSDARVASLTPRAPSLQEEDNTSDVETDGSPPSLTETPTTQTIFTSPAAQRAGPDVQERLTP--HNSEASASNHSVECQPGDDADSLSSEGANIPEQLTERIEPSPTTNEELHPEQVTSDTLEQQVGSVQSEQDDTEQDASESAFLSEQLQILLEGKDKWSWPKRCEAMTTVSQALVTSPSDGDIATVREAMASLSNAVNDNLDELRPSIINSALRLINSVLTSKADRGSNFAEDVFPSVMDISCGRSLTAREAARCIALMLQVYPCLSNILEDADNPDRLIELLQLDVDEESGLPETQDRAKLALPLVHQAVHGEVSVIPHSPEGV--VTPAAQNGPCQASNESVSPVHCSTN---KNSPASAGRVESATDSAEKTKSSSAAQPT--EIPSPSGSDFRTPQQHRFSERLGPTSSSEFKATKRQSLRANLADIRLNTPLMRNKKLGNSIRKISPLSGRKKRTYTEEDIAEARSAAIRVVMEESAQREAKLRAEYQKERSELEKKFLKEQSLAAELNSVLTEYEQTMQKMISQGNSQASAYCTSLEKETKRLKAELLEVTEAYESVKERYDNGKQAIKVYENKETRFIEQIRTLKKNLSELQKWSDDLKTNCEKKLANAFSQVTTFRASYMEAEAHRNKATVDLNRVQLELTKSLSDRAKIVATLSTLEASLHQEEDKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQALKARAYDDLTRIRELENELHVKDREYEDLSNLCDEACSQLE 916          
The following BLAST results are available for this feature:
BLAST of Gchil6686.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIN5_9FLOR3.000e-22354.22TACC_C domain-containing protein n=1 Tax=Gracilari... [more]
R7QI72_CHOCR2.230e-9233.62TACC_C domain-containing protein n=1 Tax=Chondrus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 686..713
NoneNo IPR availableCOILSCoilCoilcoord: 735..800
NoneNo IPR availableCOILSCoilCoilcoord: 640..660
NoneNo IPR availableCOILSCoilCoilcoord: 538..582
NoneNo IPR availableCOILSCoilCoilcoord: 808..828
NoneNo IPR availableCOILSCoilCoilcoord: 602..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..448
NoneNo IPR availablePANTHERPTHR13924:SF10TRANSFORMING ACIDIC COILED-COIL PROTEIN, ISOFORM Kcoord: 61..699
IPR007707Transforming acidic coiled-coil-containing protein, C-terminalPFAMPF05010TACC_Ccoord: 537..689
e-value: 2.7E-10
score: 40.3
IPR039915TACC familyPANTHERPTHR13924TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2coord: 61..699
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 223..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:215014..217548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6686.t1Gchil6686.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 215014..217548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6686.t1 ID=Gchil6686.t1|Name=Gchil6686.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=845bp
MASSSDSPDVIFREKAAPTPTFEGVPIPAALQELRAAENQSASSKPSEMT
ALANKLRMFHIDSPPDSSDFAKVAAAKRKEIIESQRHETLGDKENFYAET
QKEGHILKGINLFHSPTAAGDGTGTLSLRGNKQESSEYGSEFKLQEDSSS
TDLLPTPEDVSAKRSFVAAESAHTPSMNNSHGSKESHCRERTDSGRRTDA
LVEKNGHNCRTEGHGVFESANFESDLRKILEGKDKWSWPNRKDALLTLSK
AVNVHPKEADQVLRECISKFSTTMNDHLEELRPTVITSALGLIDAIVVKR
LGTASEFSKEVFPSVMDVACGRSLTAESAARTLVHMLNYDKRLATNLRDA
DNSERLMQLVNQLIESRDNITSQNASVAMEHLRKELPNALPSPARPISAP
DTTPAGTNARADGTSGSMPSFGQGNLSARSTPNLGRRLASLRSKNLRTPS
SKVPLETSGQIASLRGNNTDFSSKIGEPSTLDFRSGSHVLKNMKLGDSVR
KASPQSTRSGRVYSEEEVESIRRHSVRIAVEKFKTSHAKELQKRAREMDD
MRQKLQREHAEVEDLRAVLEEFELTMKKMVSEGNSKANAQQIILETEKSK
LKAELIERSDAFEKLKEKYENAKEAIVVYENKESRFVDQIKELKRNMVEL
QKWSNDLKANSEKKLSKAFESVTAYRASYIDKEAHANKALSDLKRTSAEL
EKAQQSHAETAAKFATVESDMHKEQDARASAEAALATAKSSLTRVTNQKD
QFQAELTKAEEELNHLRTQVAGLKEKAQQLSDVEKRLETLTIERQSLKAR
AYDDMMRMRELEDQLDAKCRECDELNQICEEVMSQLEHSRTDGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007707TACC_C
IPR039915TACC
IPR016024ARM-type_fold