Gchil6676.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6676.t1
Unique NameGchil6676.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length361
Homology
BLAST of Gchil6676.t1 vs. uniprot
Match: A0A2V3INJ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INJ9_9FLOR)

HSP 1 Score: 333 bits (853), Expect = 7.880e-110
Identity = 180/308 (58.44%), Postives = 219/308 (71.10%), Query Frame = 0
Query:   48 ISVPHSKRRRLQLQACALIFFVILEIFLVFSIRPCIATRSVRCVAVDTSIRFDQGGPSQQAESAALKCLILNRGRFTQYNATKSAS-GRIRCGTKHLFHFRLRSTTLFTDPLQDQQPTVDPKDLTISCSSKSPNSDEDNTCLLVLESNKTIYMSDLLFPSPPS-QLPDAQTFPFSATSISYDVSPKQIEFLGVRGANTLLDGIREPVQFRHRVFSGFSNETCEERDTNPLHTQVHPAMLAGLILVWVTPVLFYVVLCFAKPLATSFFDMRDPMHWAERTCRTSKPALEKNVVVKLVEM-NGEERVLVC 352
            ISV  SKRRR  LQA AL+FFVILEI LVFS+ P  A RSV CV+VDTS+RF  G  S QAESAA  C  LNRGRFT++NAT S S GR  CG K LF F L STTLFT+ +  Q+  +D ++ T++C+S+ P S  DN CLLVL +   +++SDLL+  PP+ Q+ D +  PFSAT + Y  S +Q EFLG R AN LL+G+R+PV FRHRVFSGFSNETC ERD +PLHTQ+HPAM   L+L+W    L Y VL   KPL T FFDMRDPMHWAERT R S+  LE++ V++ V   NG+ RVLVC
Sbjct:   15 ISVKRSKRRRRFLQAAALVFFVILEILLVFSVHPYSAFRSVPCVSVDTSLRFSVGNHSPQAESAATGCRTLNRGRFTEHNATFSMSTGRTACGKKPLFRFYLNSTTLFTNLIDLQRSAIDTENHTVACASR-PVSTRDNKCLLVLRAENDLFISDLLYTFPPAAQVFDIEQLPFSATRLPYKPSQEQAEFLGARAANVLLEGVRKPVLFRHRVFSGFSNETCRERDVDPLHTQIHPAMFTALVLIWCACFLTYTVLRCVKPLGTPFFDMRDPMHWAERTYRPSRVILERDAVIQAVVFENGKRRVLVC 321          
BLAST of Gchil6676.t1 vs. uniprot
Match: A0A2V3IT05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 104 bits (260), Expect = 2.030e-21
Identity = 106/371 (28.57%), Postives = 161/371 (43.40%), Query Frame = 0
Query:    1 MVIIALKTTFVNLIISVLSCLSELLAVSALLALRTRREWSFLSKGNQISVPHSKRRRLQLQACALIFFVILEIFLVFSIRPCIAT--RSVRCVAVDT-SIRFDQGGPSQQAESAALKCLILNRGRFTQ----YNATKSASGRIRCGTKHLFHFRLRSTTLFTDPLQDQQPTVDPKDLTISCSSKSPNSDE----DNTCLLV--LESNK----TIYMSDLLFPSPPSQLPDAQT-FPFSATSISYDVSPKQIEFLGVRGANTLLDG----IREPVQFRHRVFSGFSNETCEERDTNPLHTQVHPAMLAGLILVWVTPVLFYVVLCFAKPLA---TSFFDMRDPMHWAERTCRTSKPALEKNVVVKLVEMNGE 346
            MV I LK+ FV+LI++++S L+EL    ALL      E   L KG Q+SV   + R   L   A++ F+ LE+ + F   P I    R+  C+AVD   +R    G +   +   ++C+ + +  F Q    ++   +   R+RCG   L+ +       FT     +    D  DL + C   +P   E    +  C  V  L  N      +Y+S  +  S    L + Q   PF  TS+ Y+ S     F     A  LL      + +P++ R RVF G     C         T V   ++ G++  W+   L      FA  L    + F+DM DP+HWA+RT R     +  N VV  V  +GE
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDEDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNEDDLQFTLTNVTRTGGTDT-DLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTNVYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNF-----ARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFL-----TFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVGNPVVTSVYEHGE 360          
BLAST of Gchil6676.t1 vs. uniprot
Match: A0A2V3J5C2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 3.300e-20
Identity = 96/360 (26.67%), Postives = 161/360 (44.72%), Query Frame = 0
Query:    1 MVIIALKTTFVNLIISVLSCLSELLAVSALLALRTRREWSFLSKGNQISVPHSKRRRLQLQACALIFFVILEIFLVFSIRPCIATRSVR--CVAVDTSIRFDQG--GPSQQAESAALKCLILNRGRFTQYNATKSASGRI----RCGTKHLFHFRLRSTTLFTDPLQDQQPTVDPKDLTISCSSKSPNSDEDNTCLLVLESNKTIYMSDLLFPSPPSQ-LPDAQTFPFSATSISYDVSPKQIEFLGVRGANTLLDGIREPVQFRHRVFSGFSNETCEERDTNPLHTQVHPAMLAGLILVWVTPVLFYVVLCFAKPLATSFFDMRDPMHWAERTCRTSKPALEKNVVVKLVEMNGEERVLV 351
            MV+I LK+ + +LI++V+S ++EL  +SA+L      E   L  G +++V H + R   L   A + FV LE+F  F   P   T  VR  C ++D ++   QG    S Q     +KC+ +N   F Q+    S    I      G   +F    +   L+T  ++       P +  + C   S        C+ V  S   +  +D +     S+ L ++ T P   T+ISY+V+  +  F   R  + L  G+ +    R  VF+G +   C  +  +   T+V    +  +++ W   +  +V     +     F+DM DP+HWA++T R +  +   N VV  V  NG   +LV
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLD-ALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECE-KKEVLYTANVERAPDEPVPDEYVVGCVGTS--------CVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTTISYNVTGLESAF-ATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNFKTFSDA-TRVRKGFIYAIVIAWALSISAFVGSFAIR--RRIFYDMSDPLHWAQKTIRDNDLSDTDNPVVTTVYENGSRALLV 346          
BLAST of Gchil6676.t1 vs. uniprot
Match: A0A2V3J5A0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 3.250e-14
Identity = 99/371 (26.68%), Postives = 163/371 (43.94%), Query Frame = 0
Query:    1 MVIIALKTTFVNLIISVLSCLSELLAVSALLALRTRREWSFLSKGNQISVPHSKRRRLQLQACALIFFVILEIFLVFSIRPCIAT--RSVRCVAVDT-SIRFDQGGPSQQAESAALKCLILNRGR-FTQYNATKSASGRIRCGTKHLFHFRLRSTTLFTDPLQDQQPTVD-PKDLTISCSSKSPNSDE-----DNTCLLVL-------ESNKTIYMSDLLFPSPPSQLP-DAQTFPFSATSI-----SYDVSPKQIEFLGVRGANTLLDGIREPVQFRHRVFSGFSNETCEERDTNPLHTQVHPAMLAGLILVWVTPVLFYVVLCFAKPLATS---FFDMRDPMHWAERTCRTSKPALEKNVVVKLVEMNG 345
            MV+I LK+ +V+LI +++S L+EL  + ALL +    E   L KG+ +SV   + R   L       F  +E+ L F   P +    +S  CVAV+T + R    G S +     L C+  N    F +       + ++ C           +T +FT      +P V  P     + SS++P  D      D  C+++         S+ T++ SD+ F    S L  D     F  T+I     + ++ PK  E L         + + +P + R  +F G   +TC+ + T+   T+V P ++  +  VWV  +  Y     A  L  S   F+D+ +P+HWA+RT R +   +  +  V  V  NG
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAES--------ATLMFT-----LEPHVSLPIGTAAAVSSENPFPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERL----LQAYDENLNDPFELRRLMFLGSERDTCQFQRTSEA-TEVPPFIIVSVSTVWVISLAAY-----AMTLLLSRRVFYDISNPVHWAKRTYRRTDEPVHGDPSVSRVLENG 348          
BLAST of Gchil6676.t1 vs. uniprot
Match: A0A2V3IN83_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN83_9FLOR)

HSP 1 Score: 58.5 bits (140), Expect = 6.770e-6
Identity = 83/365 (22.74%), Postives = 150/365 (41.10%), Query Frame = 0
Query:    3 IIALKTTFVNLIISVLSCLSELLAVSALLALRTRREWSFLSKGNQISVP-HSKRRRLQLQACALIFFVILEIFLVFSIRPCI--ATRSVRCVAVD--TSIRFD-QGGPSQQAESAALKCLILNRGRFTQYNATKSASGRIRCGTKHLFHFRLRSTTLFTDPLQD--QQPTVDPKDLTISCSSKSPNSDE---DNTCLLVLESNKTIYMSDLLFPSPPSQLPDAQTFPFSATSISYDVSPKQIEFLGVRGANTLL---DGIREPVQFRHRVFSGFSNETCEERDTNPLHTQVHPAMLAGLILVWVTPVLFYVVLCFAKPLATSFFDMRDPMHWAERTCRTSKPALEKNVV-VKLVEMNGEERVLVC 352
            II L+     L+ +++S LSE+  +SA+L + T++E   LS    +S+  HS R RL +   A++ F+ LE  +    +  I     S +CV VD  TS   + +   +++ E+  L C+ +       +N         R G K           +F D   D   +  +D K   I      PN+++   +  C+ +      ++ S    P P ++      +    T    +  P  +  L       LL    GI E +Q R ++F       CE  + +  HT V   +++   L W    + + +    K  +  F+++ DP+HW  RT       ++  V   +   ++G  RV +C
Sbjct:   16 IIPLRPLTTQLLFTIVSALSEIGLISAVLVILTKKECHTLSTERPVSIKSHSLRWRL-IPVVAMLMFIALETLVSVHTKTHIHHVKNSHKCVQVDLRTSEALEVESSLNKEEEAVMLNCVKMTPAEDANFNIEVYPGNYSRSGEK-----------IFVDCSADWLMKYKLDTKGKGIL----EPNAEQHCRNGFCVFLYSQESKVFFSP---PLPSARFNHTNEY----TGYWTEFIPGAVPSLNSTATYLLLLYQKGILEEIQIRRKLFMSAERGQCEMTNGSKEHTLVPYWLISITALSWFCSAILFALTRVLK--SGIFYNISDPLHWTRRTYWAFNEGVDGKVTHFRSCLVDGVRRVYLC 355          
The following BLAST results are available for this feature:
BLAST of Gchil6676.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3INJ9_9FLOR7.880e-11058.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT05_9FLOR2.030e-2128.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C2_9FLOR3.300e-2026.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A0_9FLOR3.250e-1426.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN83_9FLOR6.770e-622.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 305..360
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..304
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..79
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 62..79
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 282..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:153458..154540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6676.t1Gchil6676.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 153458..154540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6676.t1 ID=Gchil6676.t1|Name=Gchil6676.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=361bp
MVIIALKTTFVNLIISVLSCLSELLAVSALLALRTRREWSFLSKGNQISV
PHSKRRRLQLQACALIFFVILEIFLVFSIRPCIATRSVRCVAVDTSIRFD
QGGPSQQAESAALKCLILNRGRFTQYNATKSASGRIRCGTKHLFHFRLRS
TTLFTDPLQDQQPTVDPKDLTISCSSKSPNSDEDNTCLLVLESNKTIYMS
DLLFPSPPSQLPDAQTFPFSATSISYDVSPKQIEFLGVRGANTLLDGIRE
PVQFRHRVFSGFSNETCEERDTNPLHTQVHPAMLAGLILVWVTPVLFYVV
LCFAKPLATSFFDMRDPMHWAERTCRTSKPALEKNVVVKLVEMNGEERVL
VCAADEISAT*
back to top