Gchil6673.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6673.t1
Unique NameGchil6673.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length217
Homology
BLAST of Gchil6673.t1 vs. uniprot
Match: A0A2V3IIK2_9FLOR (Ras-related protein RABH1d n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IIK2_9FLOR)

HSP 1 Score: 408 bits (1048), Expect = 1.270e-143
Identity = 209/216 (96.76%), Postives = 215/216 (99.54%), Query Frame = 0
Query:    1 MASSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNASSCAC 216
            MAS+Q+ASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKT+SRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENS+LAGETDLIDVNLSPRPNAT +QAS+ASSCAC
Sbjct:    1 MASAQAASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTESRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSELAGETDLIDVNLSPRPNATGDQASSASSCAC 216          
BLAST of Gchil6673.t1 vs. uniprot
Match: A0A7S0T3X7_9RHOD (Hypothetical protein n=2 Tax=Porphyridiaceae TaxID=2799 RepID=A0A7S0T3X7_9RHOD)

HSP 1 Score: 338 bits (867), Expect = 1.160e-115
Identity = 175/210 (83.33%), Postives = 188/210 (89.52%), Query Frame = 0
Query:   11 SVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNA----SSCAC 216
            SV PLAKYKLV LGDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SFL+ +KWI++VRNERG DVI+VLVGNKTD+TD RQVS EEG+AKAKEHDIMFIETSAK GFN+K+LFRKIAAALPGMENS +A +TDLIDVNLS +PNAT   A+ A    SSCAC
Sbjct:   32 SVPPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVVNRTSFLNTSKWIDEVRNERGNDVILVLVGNKTDQTDRRQVSLEEGDAKAKEHDIMFIETSAKAGFNVKALFRKIAAALPGMENSAMARDTDLIDVNLSSQPNATGSAATGAGGADSSCAC 241          
BLAST of Gchil6673.t1 vs. uniprot
Match: UPI001E1E0672 (ras-related protein RABH1d-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0672)

HSP 1 Score: 331 bits (849), Expect = 3.070e-113
Identity = 172/220 (78.18%), Postives = 189/220 (85.91%), Query Frame = 0
Query:    1 MASSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQAS----NASSCAC 216
            M + Q     SV PLAKYKLV LGDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SFLS +KWI+DVRNERG DVI+VLVGNKTD+ + RQVS EEGEAKAKEH IMFIETSAK GFN+K+LFRKIAAALPGMENS +A +TD+IDV LSPRP+ ++   +    +ASSC+C
Sbjct:    1 MVAPQEQGGASVPPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVINRTSFLSTSKWIDDVRNERGNDVILVLVGNKTDQAEKRQVSVEEGEAKAKEHGIMFIETSAKAGFNVKALFRKIAAALPGMENSHMAKDTDMIDVVLSPRPDGSAGPGNAAEGSASSCSC 220          
BLAST of Gchil6673.t1 vs. uniprot
Match: A0A1X6PFR0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFR0_PORUM)

HSP 1 Score: 329 bits (843), Expect = 2.110e-112
Identity = 171/212 (80.66%), Postives = 188/212 (88.68%), Query Frame = 0
Query:    6 SASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNA-TSEQASNASSCAC 216
            +AS+ SV PLAKYKLV +GDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR SFLS ++WIE+VR ERG DVI+VLVGNKTD+ D RQV  EEGEAKAKEH+IMFIETSAK GFN+K+LFRKIAAALPGMENS +A ETDLIDV L+P+P A  +  A  AS+CAC
Sbjct:    4 AASSASVPPLAKYKLVFVGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRASFLSTSRWIEEVRTERGGDVILVLVGNKTDQADRRQVGVEEGEAKAKEHEIMFIETSAKVGFNVKALFRKIAAALPGMENSAMARETDLIDVKLNPQPPAGAAGGAGGASTCAC 215          
BLAST of Gchil6673.t1 vs. uniprot
Match: A0A5J4Z394_PORPP (Ras-related protein RABH1d n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z394_PORPP)

HSP 1 Score: 323 bits (829), Expect = 2.580e-110
Identity = 167/209 (79.90%), Postives = 183/209 (87.56%), Query Frame = 0
Query:    8 SAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNASSCAC 216
            S+ +  PLAKYKLV LGDQ  GKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SF++  KWIE+VRNERG DVI+VLVGNKTD+T+ RQVS EEG+AKAKEHDIMFIETSAK GFN+K+LFRKIAAALPGMENS +A +TDLIDV L+    +T+  AS  SSC C
Sbjct:    5 SSSAPTPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVVNRASFINTTKWIEEVRNERGNDVILVLVGNKTDQTEKRQVSVEEGDAKAKEHDIMFIETSAKAGFNVKALFRKIAAALPGMENSAMARDTDLIDVKLNASA-STNPTASQESSCGC 212          
BLAST of Gchil6673.t1 vs. uniprot
Match: A0A4D9D1C8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.390e-105
Identity = 159/210 (75.71%), Postives = 179/210 (85.24%), Query Frame = 0
Query:    7 ASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNASSCAC 216
            AS   +  LAKYKLV LGDQG GKTSIITRFMYD F+ NYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+TNR SFL+ +KW++DVRNERG DVII+LVGNKTD +D RQVSTEEGE KAK+ +IMFIETSAK GFNIK LFRK+A ALPGME++Q  G  +LID+ L+  P ++S+QA   S CAC
Sbjct:   14 ASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKLAAAPASSSDQADTRSRCAC 223          
BLAST of Gchil6673.t1 vs. uniprot
Match: I0YR71_COCSC (Ras-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YR71_COCSC)

HSP 1 Score: 310 bits (794), Expect = 5.500e-105
Identity = 163/211 (77.25%), Postives = 182/211 (86.26%), Query Frame = 0
Query:    7 ASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNA-SSCAC 216
            A++ +V PLAKYKLV LGDQ  GKTSIITRFMYDKFDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR SFL+  +WIE+VR ERG+DVI+VLVGNKTD  D RQVS EEG+AKA+E ++MFIETSAK GFNIK+LFRKIAAALPGME+   A + DL+DVNLS   N+    AS+A SSCAC
Sbjct:    2 AASTTVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWIEEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEGDAKAREFNVMFIETSAKAGFNIKALFRKIAAALPGMESLSAAKQEDLVDVNLSATANSGRGAASSAPSSCAC 212          
BLAST of Gchil6673.t1 vs. uniprot
Match: W7U9T7_9STRA (Small gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9T7_9STRA)

HSP 1 Score: 313 bits (802), Expect = 1.150e-104
Identity = 160/210 (76.19%), Postives = 179/210 (85.24%), Query Frame = 0
Query:    7 ASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNASSCAC 216
            AS   +  LAKYKLV LGDQG GKTSIITRFMYD F+ NYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+TNR SFL+ +KW++DVRNERG DVII+LVGNKTD +D RQVSTEEGE KAK+ +IMFIETSAK GFNIK LFRK+A ALPGME++Q  G  +LID+ L+  P ++SEQA   S CAC
Sbjct:  107 ASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKLAAAPASSSEQADTRSRCAC 316          
BLAST of Gchil6673.t1 vs. uniprot
Match: A0A2S3H431_9POAL (Uncharacterized protein n=3 Tax=PACMAD clade TaxID=147370 RepID=A0A2S3H431_9POAL)

HSP 1 Score: 306 bits (785), Expect = 1.160e-103
Identity = 157/205 (76.59%), Postives = 172/205 (83.90%), Query Frame = 0
Query:   12 VQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNASSCAC 216
            V  LAKYKLV LGDQ  GKTSIITRFMYDKFDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV NR SFL+ ++WI++VRNERG DVI+VLVGNKTD  D RQVSTEEGE+K+KE ++MFIETSAK GFNIK LFRKIAAALPGME    A + D++DVNL P    ++ Q    S CAC
Sbjct:    5 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTSRWIDEVRNERGGDVIVVLVGNKTDLVDKRQVSTEEGESKSKELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAKQEDMVDVNLKPTSGQSNSQQQAGSGCAC 209          
BLAST of Gchil6673.t1 vs. uniprot
Match: A0A0G4EBT9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EBT9_VITBC)

HSP 1 Score: 306 bits (783), Expect = 2.510e-103
Identity = 156/213 (73.24%), Postives = 177/213 (83.10%), Query Frame = 0
Query:    4 SQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAKEHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPRPNATSEQASNASSCAC 216
            ++ A  G+V  L KYKLV LG+Q  GKTSIITRFMYD FDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSS AVVVYD+TNR SFL+  KWIEDVR ERG+DVII LVGNKTD  D RQVS EEGE KAKE++IMFIETSAK GFNIK+LFRK+A+ALPG+EN Q  G++ ++D+ L+  P  T E+A+    CAC
Sbjct:    2 AEGAGRGNVSGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGSDVIIALVGNKTDLADRRQVSVEEGEQKAKENEIMFIETSAKAGFNIKALFRKLASALPGLENQQTTGDSQMVDIQLNAAPQDTKEKANK---CAC 211          
The following BLAST results are available for this feature:
BLAST of Gchil6673.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIK2_9FLOR1.270e-14396.76Ras-related protein RABH1d n=2 Tax=Rhodymeniophyci... [more]
A0A7S0T3X7_9RHOD1.160e-11583.33Hypothetical protein n=2 Tax=Porphyridiaceae TaxID... [more]
UPI001E1E06723.070e-11378.18ras-related protein RABH1d-like n=1 Tax=Mercenaria... [more]
A0A1X6PFR0_PORUM2.110e-11280.66Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z394_PORPP2.580e-11079.90Ras-related protein RABH1d n=1 Tax=Porphyridium pu... [more]
A0A4D9D1C8_9STRA1.390e-10575.71Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
I0YR71_COCSC5.500e-10577.25Ras-domain-containing protein n=1 Tax=Coccomyxa su... [more]
W7U9T7_9STRA1.150e-10476.19Small gtp-binding protein n=1 Tax=Nannochloropsis ... [more]
A0A2S3H431_9POAL1.160e-10376.59Uncharacterized protein n=3 Tax=PACMAD clade TaxID... [more]
A0A0G4EBT9_VITBC2.510e-10373.24Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 156..178
score: 35.93
coord: 59..81
score: 48.05
coord: 18..39
score: 41.79
coord: 121..134
score: 47.92
coord: 41..57
score: 33.76
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 15..181
e-value: 2.0E-33
score: 127.1
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 23..215
e-value: 2.8E-9
score: 46.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..181
e-value: 1.9E-87
score: 306.5
NoneNo IPR availablePANTHERPTHR24073:SF1128RAS-RELATED PROTEIN RABH1B-LIKEcoord: 11..216
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 11..216
NoneNo IPR availablePROSITEPS51419RABcoord: 11..214
score: 32.023361
NoneNo IPR availablePROSITEPS51420RHOcoord: 11..178
score: 10.829132
NoneNo IPR availableCDDcd01861Rab6coord: 18..178
e-value: 1.1661E-113
score: 319.568
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 20..180
e-value: 4.7E-13
score: 47.1
IPR001806Small GTPasePFAMPF00071Rascoord: 19..177
e-value: 9.8E-59
score: 197.6
IPR001806Small GTPasePROSITEPS51421RAScoord: 13..216
score: 18.035679
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 17..174
e-value: 1.6E-29
score: 100.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 14..212
e-value: 1.2E-67
score: 229.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:100430..101080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6673.t1Gchil6673.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 100430..101080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6673.t1 ID=Gchil6673.t1|Name=Gchil6673.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=217bp
MASSQSASAGSVQPLAKYKLVVLGDQGCGKTSIITRFMYDKFDNNYQATI
GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVT
NRPSFLSVNKWIEDVRNERGTDVIIVLVGNKTDKTDSRQVSTEEGEAKAK
EHDIMFIETSAKNGFNIKSLFRKIAAALPGMENSQLAGETDLIDVNLSPR
PNATSEQASNASSCAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase