Gchil6672.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6672.t1
Unique NameGchil6672.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1076
Homology
BLAST of Gchil6672.t1 vs. uniprot
Match: A0A2V3IIL4_9FLOR (DRBM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIL4_9FLOR)

HSP 1 Score: 493 bits (1268), Expect = 3.110e-153
Identity = 396/1135 (34.89%), Postives = 563/1135 (49.60%), Query Frame = 0
Query:    7 EYESFSDWEP-CGHDSGHENPQIVISRPLSFVLVEDDKPSVVEHRRATPSDGRPKKTLLNLPSENVERLPTHSQTTSRYSP-RTHKPSGVR-----SSTLLTPKTASH-----NAELNINVPVYDVNDRIPRHNRAHCSRPSRNVAGDASLVVEEVFTGKRSSAALKNTDLYISNNSSSERPTSKRTKPPAST--APMVMLGVRGSSIPERSATSLA--VSEKDSYRLGSTTEPITLEREKARDSPPLNPNELLKPKDNSALHAHAQDSFIPEPNRSLAPPDNTEHRRYAAPCPRRQHDLTLEGRDGANERTPSTQTGKTKFRKNMGVHTQNRSDDPTHLAHDR---RTPFGMPPRLVGAPSFPRLGFVMPIMPPESQLGFGLSGMNRTRISAPGSMHHGLPNPHFSHGGANLGPVADESI-HGFSSE-TMAHLNTMHHASFL---PLSPMTPM--------------------------IGYQRQLS-MHPFLPQVPPHMPMNPFERGNVFHN--QTAHFNPALSTAP--VPRNPFPDDAAVITGSDSGFASIPAEAVTLHMATP-------PVGDVANRKALDETKKSADK--TRTSSESLGIDFNQKVEKEDTIFRRRKQLVKKQQAKKATDRSVDEVDEIPCDDEEDGVDYVSRLTQIQQK-KFLSLPVPLFFPVQAKDGGGSGWKCVMTAKLLNKSPSEELATIKVARNQRRAKRAAAKELLSSLESRIPELFSSETSGKQNVQAMKSQSAVNVIQLLVRDGHLPCLPNCETEEVNDTDEDRWRCSATLFTNDHGRKIFVEYGPSKSTAKKKWARKALEILIQLKVPGVEQYRCVLDPMQATAKKTMAGVPKASEVIVRTSDDEEMNDSCDDIVEDMDFTLTLPSDYELVLAKTEADCEKWFDIFAQPGAELGVFIDSKSARLAVEENYTSQLDSDLR-KVQRPILCFSTASSCIIIRADKKQAS---GNGSEPDEAPGAFWVPEVVAETLEDPRVQKAALGPDDGLDLLVVVHGIHCASVQDIAVSSLAITGYGRVGSSRNLPSLRDLTKYWMRKEAKDLSWKAIWPSKQKWVEERLSRDKKEAAMAVLSSYATFCVREKVCDAARLKRMNAPGASNDLEVLSRRIVQT 1072
            +Y+S+SDWE   G D     P  + S PL FVLV+D+K            D  P+  L    +     +     TT R    R  K  G       S  L+    A+H     N     +   +D N+RIPRH++    +                                       ER T K  K P      P V    R SS  +R  TS     +      L   T+   L       +P ++ N +   K N+AL        +P+P    A PDN +   +A   P       +      +E+  ST +G      + G+ T  R        H++    TP  +P  ++G      LG     +P +   G           S P S+   + + +  HGG   G   D +I HGF    +   + T  H   L   P+S   P+                          IGY    + +H F P +P  MP  PF  GN   +  Q  +F P     P  VP   FP++  V T   +    +P++ +   +  P       PV  +     L  T KS D+   R  + +  +  N   +      +R K    K    +   R   EVDEIP ++++D  D+VSRL +I QK KF++L  P +  V+ + GGGSGW C M A +L KSP E +  + VARN+ RAKRAAAKE+L  L+S++PE F SE  GKQ  Q ++  SAVN +  L ++G+LPC P  + EEVN+  E+ WRC+ TLFT DH  K+FVEYGPSK+ AK+K ARKALE +I+LK PG +Q++ +L P +    KTMA +P ASEVI +T DDE  + SCDD+VE     L LP+DYELV+A+TE+DC  WF   AQPGA LG++IDS++AR +V     S+L+ +   +++ P+LCFS+A++ I++R DK+++S   G  S+ +E    FWVP++VA+TLED RV+KAAL  D+GLD L   HGI    VQD+A++S+AI G GR    R   SLR LTKYWMR+E KD++W+ +WP + +  +  L  D KE A AVLS++A  CVR K+ DAAR+KR+N  GASNDL VL +R++ +
Sbjct:    7 DYDSYSDWEAYAGIDP--PPPGSLKSLPLKFVLVDDEK---------IAEDDSPRDVLYQETANPSHCVNAIQDTTLRSKEVRGDKKGGSGFHDDGSRVLVAQNVAAHCTDSPNRREATSAGTHDTNERIPRHSQRRFGQ---------------------------------------ERKTEKSQKRPRPLDYVPFVSSDTR-SSPKQRFRTSKGRDFTRSTGRFLNPVTQTTDLTGGTQGPAPSISTNHVQAAK-NTALRKR-----VPKP----ASPDNGKFSDHA---PTGMRPSQIAPPHLRSEKQTSTSSGVDHL--SAGLPTSVRWKQNEGRQHEKSLHNTPVPLP-AVMGTSV---LGISQLSLPAQEMDG---------ATSTPSSIREAIASSNNQHGGI-FGLQPDGTILHGFQRPLSTPRIPTPRHPGALYSNPISKSNPLCDVTSPALFHGGMPTTAFGPFPFQHAIGYPGVPNGLHNFAPPLPI-MPGRPFI-GNFGSDMMQAVNFQPPCVGNPGQVPPGAFPNER-VDTLRGTIPVDVPSQPLNTEVIAPRSNVLHSPVQALEVESNLRVTDKSLDREDVREDARNAEVRSNDCAQMTGASAQRSKNTPVKGTTVRRGLRKAIEVDEIPYEEDDDAEDHVSRLNEIPQKRKFIALARPQWQMVRVRSGGGSGWMCTMKATVLRKSPQEVVECVSVARNKNRAKRAAAKEMLLKLKSKLPEAFLSENQGKQTNQPVRMHSAVNALHQLAQEGNLPCQPGYDVEEVNEAGENHWRCTTTLFTRDHDSKVFVEYGPSKNAAKQKGARKALEAIIKLKSPGADQFQKLLLPAEIQPTKTMANIPGASEVIFQTGDDEMSHGSCDDLVEGTGLRLELPTDYELVIAETESDCLNWFSAHAQPGARLGIYIDSETARDSVFR--VSELEGNKEYEIKFPMLCFSSANAGIVVRVDKRESSPDAGGLSQVEE--NTFWVPDIVADTLEDARVEKAALACDEGLDELFERHGIQADGVQDVALTSIAIAGLGRFDGRRQFSSLRQLTKYWMRQEVKDINWQTLWPKRSELPKALLGTDAKELAAAVLSAFAVRCVRVKLSDAARMKRVNMGGASNDLVVLCKRVLDS 1054          
BLAST of Gchil6672.t1 vs. uniprot
Match: A0A2V3IU14_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU14_9FLOR)

HSP 1 Score: 177 bits (448), Expect = 2.520e-47
Identity = 90/158 (56.96%), Postives = 110/158 (69.62%), Query Frame = 0
Query:  912 NGSEPDEAPGAFWVPEVVAETLEDPRVQKAALGPDDGLDLLVVVHGIHCASVQDIAVSSLAITGYGRVGSSRNLPSLRDLTKYWMRKEAKDLSWKAIWPSKQKWVEERLSRDKKEAAMAVLSSYATFCVREKVCDAARLKRMNAPGASNDLEVLSRRI 1069
            N S  D     FWVP+V  + LED RVQKAA+  D  LDLL   HGI C S+ + +VSSLAI GYGRV  S+NL +L +LT+ WMR+EA+ +SW+ IWP K   VE+ L  D KE A+ VLS+YATFCVREK+CDAAR+KR N PGA N L V S R+
Sbjct:   20 NDSNFDHVHHTFWVPKVATKVLEDSRVQKAAIAGDYWLDLLFEHHGIQCESIHEFSVSSLAIAGYGRVDDSQNLSTLTELTEEWMRQEARAISWEEIWPKKHLLVEKWLGGDDKEVALGVLSAYATFCVREKLCDAARMKRRNNPGAVNGLHVFSTRM 177          
BLAST of Gchil6672.t1 vs. uniprot
Match: R7QJ53_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ53_CHOCR)

HSP 1 Score: 191 bits (485), Expect = 1.430e-46
Identity = 152/508 (29.92%), Postives = 244/508 (48.03%), Query Frame = 0
Query:  585 EIPCDDEEDGVDYVSRLTQIQQK-KFLSLPVPLFFPVQAKDGGGSGWKCVMTAKLLNKSPSEELATIKVARNQRRAKRAAAKELLSSLESRIPELFSSETSG-----KQNVQAMKSQS-AVNVIQLLVRDGHLPCLPNCETEEVNDTDEDRWRCSATLFTNDHGRKIFVEYGPSKSTAKKKWARKALEILIQLKVPGVEQYRCVL------DPMQATAKKTMAGVPKASEVIVRTSDDEEMNDSCDDIV----EDMDFTLTLPSDYELVLAKTEADCEKWFDIFAQPGAELGVFIDSKSARLAVEENYTSQLDSD-----LRKVQRPILCFSTASSCIIIRADKKQASGNGSEPDEAPGAFWVPEVVAETLEDPRVQKAALGPDDGLDLLVVVHGIHCASVQDIAVSSLAITGYGRVGSSRNLPSLRDLTKYWMRKEAKDLSWKAIWPSKQKWVEERLSRDKKEAAMAVLSSYATFCVREKVCDAARLKRMNAPGASNDLEVLSRRIV 1070
            E+  D+ EDG D+VS L  + Q+ +  + PV   F    KD  G  W C  T K+L K   E L     A++++RAK+  +K+L+++L+  I     +E+SG      + +  M   S AV  +  L     L   P+   EE+       WRC+  +  +  G+    E GP K  AK   + KALE L +LKV   E++  +       +  +A + K    +  A E IV+ SD                ED +    LP  Y +V A     CE+W    A+PG+E+GVF+DS SAR   +   T+++ +D     +  ++  +LCFST +SC+++R DK   +   S+  +     W+PE V   L D ++QK     DDGL  L   HGI    + D+++ S A   +    ++R L  + +L KYW++KE   +  K +W       E  +        MAV+S++A  C++E++ D A  KR    GA+ +   LS+R++
Sbjct:  313 EVSSDEGEDGEDHVSTLHVLSQRLRKWTNPV---FAWDRKDARGH-WVCTGTVKVLFKEGEEFLKKTVNAKSRKRAKQKVSKQLIAALKEMIAASRKAESSGDAGSPSEEIDKMTGISTAVGALTQLFHRHKLDTQPDTRFEEIGGG---LWRCTVIMAISGVGKVKVSEEGPQKKLAKSVASLKALERLRELKVIRPEEFSHLKLCQTGKEGREAVSAKEANKMRSAREDIVQISDXXXXXXXXXXXXXXXEEDGEGRFLLPKHYLIVEATKPEHCEEWRTTHAKPGSEIGVFVDSCSARREFDGLKTNRVSADGVTKDIGSIR--VLCFSTKTSCLVVRKDK--CTDEKSKDKDCEEGLWLPEAVCTLLCDRKIQKHGHNVDDGLVWLREYHGIQAWGMNDVSILSSASRSWSHCSNTRVLHGIHELMKYWLKKELVSVCLKDVWRKGSASDEAVVPEGDDTTGMAVVSAFACMCIQEQIRDEAVHKRTRLYGAAAEFRELSKRLM 809          
BLAST of Gchil6672.t1 vs. uniprot
Match: A0A2V3J3V8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V8_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 3.450e-29
Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 0
Query:  912 NGSEPDEAPGAFWVPEVVAETLEDPRVQKAALGPDDGLDLLVVVHGIHCASVQDIAVSSLAITGYGRVGSSRNLPSLRDLTKYWMRKEAKDLSWKAIWPSK 1012
            N S  D     FWVPEV A+ LED RVQKAA+   D  DLL   HGI C S+ D++VSSLA+ GYGRVG S+NL +  +LT+YWMRKEA+ +SW+ IWP K
Sbjct:   20 NDSNLDHVQDKFWVPEVAAKVLEDSRVQKAAIAGVDWFDLLFEHHGIQCESIHDVSVSSLAVAGYGRVGDSQNLSNSTELTEYWMRKEARAISWEEIWPKK 120          
The following BLAST results are available for this feature:
BLAST of Gchil6672.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IIL4_9FLOR3.110e-15334.89DRBM domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IU14_9FLOR2.520e-4756.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJ53_CHOCR1.430e-4629.92Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J3V8_9FLOR3.450e-2957.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:97010..100237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6672.t1Gchil6672.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 97010..100237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6672.t1 ID=Gchil6672.t1|Name=Gchil6672.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1076bp
MAHMTNEYESFSDWEPCGHDSGHENPQIVISRPLSFVLVEDDKPSVVEHR
RATPSDGRPKKTLLNLPSENVERLPTHSQTTSRYSPRTHKPSGVRSSTLL
TPKTASHNAELNINVPVYDVNDRIPRHNRAHCSRPSRNVAGDASLVVEEV
FTGKRSSAALKNTDLYISNNSSSERPTSKRTKPPASTAPMVMLGVRGSSI
PERSATSLAVSEKDSYRLGSTTEPITLEREKARDSPPLNPNELLKPKDNS
ALHAHAQDSFIPEPNRSLAPPDNTEHRRYAAPCPRRQHDLTLEGRDGANE
RTPSTQTGKTKFRKNMGVHTQNRSDDPTHLAHDRRTPFGMPPRLVGAPSF
PRLGFVMPIMPPESQLGFGLSGMNRTRISAPGSMHHGLPNPHFSHGGANL
GPVADESIHGFSSETMAHLNTMHHASFLPLSPMTPMIGYQRQLSMHPFLP
QVPPHMPMNPFERGNVFHNQTAHFNPALSTAPVPRNPFPDDAAVITGSDS
GFASIPAEAVTLHMATPPVGDVANRKALDETKKSADKTRTSSESLGIDFN
QKVEKEDTIFRRRKQLVKKQQAKKATDRSVDEVDEIPCDDEEDGVDYVSR
LTQIQQKKFLSLPVPLFFPVQAKDGGGSGWKCVMTAKLLNKSPSEELATI
KVARNQRRAKRAAAKELLSSLESRIPELFSSETSGKQNVQAMKSQSAVNV
IQLLVRDGHLPCLPNCETEEVNDTDEDRWRCSATLFTNDHGRKIFVEYGP
SKSTAKKKWARKALEILIQLKVPGVEQYRCVLDPMQATAKKTMAGVPKAS
EVIVRTSDDEEMNDSCDDIVEDMDFTLTLPSDYELVLAKTEADCEKWFDI
FAQPGAELGVFIDSKSARLAVEENYTSQLDSDLRKVQRPILCFSTASSCI
IIRADKKQASGNGSEPDEAPGAFWVPEVVAETLEDPRVQKAALGPDDGLD
LLVVVHGIHCASVQDIAVSSLAITGYGRVGSSRNLPSLRDLTKYWMRKEA
KDLSWKAIWPSKQKWVEERLSRDKKEAAMAVLSSYATFCVREKVCDAARL
KRMNAPGASNDLEVLSRRIVQTEAG*
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