Gchil6651.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6651.t1
Unique NameGchil6651.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length144
Homology
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A2V3J0D9_9FLOR (Sec-independent protein translocase protein TatA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0D9_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 6.350e-29
Identity = 68/96 (70.83%), Postives = 75/96 (78.12%), Query Frame = 0
Query:   53 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMXXXXXXXXRELEQKRVSKSSAA-----DTSASSTVETRQEKAEA 143
            MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFR+AM        RE+EQK   K++ A     ++SAS+T    QEKAEA
Sbjct:    1 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFREAMQESLDEADREIEQKHTDKTAQAPNTTNESSASTT--NVQEKAEA 94          
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A7J7IRQ4_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRQ4_9RHOD)

HSP 1 Score: 85.9 bits (211), Expect = 1.610e-18
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 0
Query:    9 SFVPTPANLRRTKKGLSSGLNHVCARRDSSVSTSRTINKRSELQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMXXXXXXXXRELEQK 118
            S VP  + + R +   S   +    RR S    +RT N  + +QMGLFGLG PE+AVI GVG+ I+GPS++ ELG++LG LAG LK+ASSEF++ +        +E + K
Sbjct:   27 SVVPESSFVSRARAARSRRRSTWAGRRRSE--NARTANAANAVQMGLFGLGWPEIAVIVGVGLLIWGPSRVGELGRNLGSLAGNLKRASSEFKEGLETSLAEAEKEQQSK 134          
BLAST of Gchil6651.t1 vs. uniprot
Match: R7QCU7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCU7_CHOCR)

HSP 1 Score: 84.3 bits (207), Expect = 4.420e-18
Identity = 47/83 (56.63%), Postives = 57/83 (68.67%), Query Frame = 0
Query:   10 FVPTPANLRRTKK-GLSSGLNHVCARRDSSVSTSRTINKRSELQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAG 91
            FV  PA    T +  L  GL+ +C RR +     RT  +R+ + MGLFGLG PELAVIA VG+FIFGP KIAE+GKDLGG+AG
Sbjct:    7 FVAGPAPFSLTSRLTLQRGLDSICRRRTTFAVQYRT--RRAHISMGLFGLGFPELAVIATVGVFIFGPGKIAEMGKDLGGIAG 87          
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A1X6P1X6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1X6_PORUM)

HSP 1 Score: 83.2 bits (204), Expect = 2.170e-17
Identity = 39/88 (44.32%), Postives = 60/88 (68.18%), Query Frame = 0
Query:   35 RDSSVSTSRTINKRSELQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMXXXXXXXXRELEQKRVSK 122
            R ++ + +    +R+ +QMG+FGLG PE+AV+ GVG+ +FGP K+A+ GK  G LAG +KKA++EFRDAM         E+E ++ +K
Sbjct:   32 RHAASAAAPAAGRRASVQMGIFGLGAPEIAVVVGVGLLLFGPKKLADYGKKAGSLAGDVKKATAEFRDAMDESLSDADAEIEARKATK 119          
BLAST of Gchil6651.t1 vs. uniprot
Match: M1VCX5_CYAM1 (Similar to thylakoidal sec-independent protein transporter Tha4 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCX5_CYAM1)

HSP 1 Score: 82.8 bits (203), Expect = 2.530e-17
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0
Query:   49 SELQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMXXXXXXXXRELEQK 118
            S LQMGLFGLG PE+AVIAGVG+ I+GPS+I ELG++LG LAG LK+ASSEF++ +        +E +QK
Sbjct:   65 SALQMGLFGLGWPEIAVIAGVGLLIWGPSRIGELGRNLGTLAGNLKRASSEFKEGLETSLADAEKEEKQK 134          
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A7S2ZGP5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZGP5_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 3.380e-15
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   53 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMXXXXXXXXRELEQKRVS 121
            MGLFGLG PEL VI GV   IFGP+KI+ELGK+LG +AG +KKA+SEF+DAM        +E+ +++ S
Sbjct:   50 MGLFGLGFPELLVIGGVTALIFGPNKISELGKNLGSVAGSVKKATSEFQDAMQESLEQADKEIAEQKES 118          
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A7S0BK48_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BK48_9RHOD)

HSP 1 Score: 76.3 bits (186), Expect = 7.040e-15
Identity = 45/93 (48.39%), Postives = 60/93 (64.52%), Query Frame = 0
Query:   53 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMXXXXXXXXRELEQKRVSKSSA------ADTSASSTVETRQE 139
            MGLFGLG PEL VI GV   IFGP+KI+ELGK LG +AG +KKA+SEF+DAM        +E+  ++ S S          T  ++T+ET++E
Sbjct:   50 MGLFGLGFPELLVIGGVTALIFGPNKISELGKSLGSVAGSVKKATSEFQDAMQESLEQADKEIAAQKESDSGKEGETKKTPTPEATTIETKKE 142          
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A7S0ZBV1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBV1_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 1.800e-14
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0
Query:   24 LSSGLNHVCARRDSSVSTSRTINKRSE--LQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAMXXXXXXXXRELEQKR 119
            L S     C  +    +     N++    + MG+FGLG  EL V+AGVG+ +FGP K+AE GK LG LAG +KKA+SEF++AM        +E+  K+
Sbjct:   20 LKSSSGSFCQLKSKHAAVVPNTNRKESRVITMGIFGLGWGELLVVAGVGVLLFGPKKLAESGKSLGSLAGSVKKATSEFQEAMQESLDEADKEIAAKK 117          
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A1X6NNZ5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNZ5_PORUM)

HSP 1 Score: 73.9 bits (180), Expect = 4.260e-14
Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = 0
Query:   53 MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAM 104
            MG+FGLG PE+AV+ GVG+ +FGP K+A+ GK  G LAG +KKA++EFRDAM
Sbjct:    1 MGIFGLGAPEIAVVVGVGLLLFGPKKLADYGKKAGSLAGDVKKATAEFRDAM 52          
BLAST of Gchil6651.t1 vs. uniprot
Match: A0A5B8ML07_9CHLO (Twin arginine-targeting-like sec-independent protein translocator protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8ML07_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 6.190e-14
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 0
Query:   38 SVSTSRTINKRSELQ-MGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEFRDAM 104
            + +T RT     E+  MGLFGLGLPE+AVIAGVGI +FGPSKI ELGK LG    GL+ A+ EF++ +
Sbjct:   35 TTTTQRTRRTNREVTAMGLFGLGLPEIAVIAGVGILLFGPSKIPELGKTLGKTVRGLQDAAQEFKEEL 102          
The following BLAST results are available for this feature:
BLAST of Gchil6651.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0D9_9FLOR6.350e-2970.83Sec-independent protein translocase protein TatA n... [more]
A0A7J7IRQ4_9RHOD1.610e-1843.64Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
R7QCU7_CHOCR4.420e-1856.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P1X6_PORUM2.170e-1744.32Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M1VCX5_CYAM12.530e-1760.00Similar to thylakoidal sec-independent protein tra... [more]
A0A7S2ZGP5_9RHOD3.380e-1556.52Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BK48_9RHOD7.040e-1548.39Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZBV1_9RHOD1.800e-1440.82Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NNZ5_PORUM4.260e-1463.46Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5B8ML07_9CHLO6.190e-1457.35Twin arginine-targeting-like sec-independent prote... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..121
NoneNo IPR availableGENE3D1.20.5.3310coord: 57..115
e-value: 1.5E-11
score: 45.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..143
NoneNo IPR availablePANTHERPTHR33162SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 31..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..143
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416TatA_B_Ecoord: 58..106
e-value: 5.4E-9
score: 35.3
IPR006312Sec-independent protein translocase protein TatA/EHAMAPMF_00236TatA_Ecoord: 55..142
score: 15.020176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:1352387..1352818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6651.t1Gchil6651.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 1352387..1352818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6651.t1 ID=Gchil6651.t1|Name=Gchil6651.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=144bp
MFNHHQGVSFVPTPANLRRTKKGLSSGLNHVCARRDSSVSTSRTINKRSE
LQMGLFGLGLPELAVIAGVGIFIFGPSKIAELGKDLGGLAGGLKKASSEF
RDAMQESMDEADRELEQKRVSKSSAADTSASSTVETRQEKAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E
IPR006312TatA/E