Gchil6630.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6630.t1
Unique NameGchil6630.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length523
Homology
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BLAST of Gchil6630.t1 vs. uniprot
Match: A0A2V3J069_9FLOR (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J069_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 8.800e-26
Identity = 79/243 (32.51%), Postives = 114/243 (46.91%), Query Frame = 0 
Query:    1 MKLGPDTVLFKFVVDNEWVCAPNYKKLSDGFGGWNNEVEI-------------RLPSEGT------GTRRNMRVNEDRTDAPHSPPSTNASVRQVTRVQIHHH------DLDDS---TADIDLRKEAESDTHKEPSVER-AQTVSHVESNQPTTR-------ITFAYPCDDKDTKVHIRGSWDGWETPFNMELSDEGQTWRTILELPAGRFIFKFVVDEHWTHSALYEIESDGYGGFNNVVSV 207
            + L P   LFKF+VD+ W  APNYK+ SD FGG+NN + +              LP          G+ +    N D      +P    + + +    Q+H        D D+S   T       E E  TH    V+  +Q VSH+ +             ++F Y  D +   V ++GSWD W+    +  S+ G  W +   LP G F+FKFVVD  WTHS  YE++SDG+GG+NNV++V
Sbjct:   51 INLNPGVFLFKFIVDDHWQYAPNYKRQSDNFGGYNNVLHVLEEPQHETQPTHDNLPQSEAHLQATLGSGKAEPENRDNHKGALTPSHLQSHIAREQSKQLHSSLQQYPSDSDNSELQTPHNTAFSEQEEQTHSAEFVDALSQQVSHMLNASSKNACDPKRAVVSFVYHVDARHADVSVKGSWDQWQKQLPLVPSEHGY-WHSNTALPPGSFLFKFVVDGKWTHSTQYEVQSDGFGGYNNVINV 292
The following BLAST results are available for this feature:
BLAST of Gchil6630.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J069_9FLOR8.800e-2632.51SNF1-related protein kinase regulatory subunit bet... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 117..213
e-value: 2.0E-20
score: 74.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 1..40
e-value: 5.4E-7
score: 31.4
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 138..211
e-value: 1.7E-16
score: 60.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..74
NoneNo IPR availablePANTHERPTHR103435'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNITcoord: 79..381
coord: 2..60
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 127..207
e-value: 1.25239E-21
score: 86.884
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 1..40
e-value: 5.12781E-9
score: 51.0605
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 124..207
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 2..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:1044732..1046401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6630.t1Gchil6630.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 1044732..1046401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6630.t1 ID=Gchil6630.t1|Name=Gchil6630.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=523bp
MKLGPDTVLFKFVVDNEWVCAPNYKKLSDGFGGWNNEVEIRLPSEGTGTR
RNMRVNEDRTDAPHSPPSTNASVRQVTRVQIHHHDLDDSTADIDLRKEAE
SDTHKEPSVERAQTVSHVESNQPTTRITFAYPCDDKDTKVHIRGSWDGWE
TPFNMELSDEGQTWRTILELPAGRFIFKFVVDEHWTHSALYEIESDGYGG
FNNVVSVSAPDSQPGHQPDSCDSIDTLLQPLKSRTDEETGVQLLVRTSSG
GTKQDDVQTIAEAIPDDNDGGLGNATSSEIKETGDNEEPAEHVTEVQLIP
KHYIERDQQLVSVNVEILEKLNFSSQVFEMVDNEEESKSDKVRANDSPFI
VSPEPEKAVDASGMPTFESESVDTDIKVDTDVNHLPRSVSLETGNEDEAP
GPISQAVSVDVGANHSPKNINPETGDADEAPGIPCFESAEDVNQVPSLKV
EVGEFGYVGPIHRRNLGIPSPEYVGVNEDPEPNLDNLSNTVDCRGERLRK
TTTDDGLGEMKKKKSSRGCTTC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR014756Ig_E-set