Gchil6619.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6619.t1
Unique NameGchil6619.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length123
Homology
BLAST of Gchil6619.t1 vs. uniprot
Match: A0A2V3J1H0_9FLOR (Histone H2A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H0_9FLOR)

HSP 1 Score: 234 bits (598), Expect = 4.360e-78
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
Query:    1 MAPKKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGDASQEV 122
            MAPKK AQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMP KKSKGDASQEV
Sbjct:    1 MAPKKAAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPHKKSKGDASQEV 122          
BLAST of Gchil6619.t1 vs. uniprot
Match: Q7XY88_GRIJA (Histone H2A (Fragment) n=3 Tax=Rhodymeniophycidae TaxID=2045261 RepID=Q7XY88_GRIJA)

HSP 1 Score: 226 bits (577), Expect = 2.010e-74
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0
Query:    4 KKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGDASQEV 122
            KKT+QSRSSKAGLQFPVGRI RFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHQVLMPRKKSKGDASQEV
Sbjct:   36 KKTSQSRSSKAGLQFPVGRIDRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHQVLMPRKKSKGDASQEV 154          
BLAST of Gchil6619.t1 vs. uniprot
Match: R7QQ41_CHOCR (Histone H2A n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ41_CHOCR)

HSP 1 Score: 222 bits (565), Expect = 5.740e-73
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0
Query:    4 KKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGDASQEV 122
            KKT+Q+RSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLG+VTIASGGV+PNIH VLMPRKKSK D SQEV
Sbjct:   10 KKTSQTRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGSVTIASGGVIPNIHTVLMPRKKSKSDPSQEV 128          
BLAST of Gchil6619.t1 vs. uniprot
Match: A0A7J7IHZ2_9RHOD (Histone H2A n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHZ2_9RHOD)

HSP 1 Score: 206 bits (523), Expect = 1.020e-66
Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    1 MAPKKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGD 117
            MAPK  A+SRSSKAGLQFPVGR+HR+LR GGYA+R+GAGAPVY+AAVMEYLTAEVLELAGNAARDNKK+RI+PRHIQLA+RNDEELNKLL NVTIASGGVLPNIH VL+P+KK KG+
Sbjct:    1 MAPKGKAKSRSSKAGLQFPVGRVHRYLRDGGYAERIGAGAPVYLAAVMEYLTAEVLELAGNAARDNKKTRIVPRHIQLAIRNDEELNKLLANVTIASGGVLPNIHAVLLPKKKGKGE 117          
BLAST of Gchil6619.t1 vs. uniprot
Match: A0A5J4Z1G0_PORPP (Histone H2A n=2 Tax=Porphyridiaceae TaxID=2799 RepID=A0A5J4Z1G0_PORPP)

HSP 1 Score: 202 bits (515), Expect = 2.260e-65
Identity = 106/127 (83.46%), Postives = 113/127 (88.98%), Query Frame = 0
Query:    1 MAPK-----KTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGDASQEV 122
            MAPK     K A SR+ KAGLQFPVGRIHR L+KGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKK+RIIPRH+QLAVRNDEELNKLL  VTIA+GGVLPNIH VLMP+KK K DASQE+
Sbjct:    1 MAPKDAKERKAAMSRTKKAGLQFPVGRIHRHLKKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLSGVTIAAGGVLPNIHAVLMPKKKGK-DASQEL 126          
BLAST of Gchil6619.t1 vs. uniprot
Match: M1V984_CYAM1 (Histone H2A n=2 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V984_CYAM1)

HSP 1 Score: 204 bits (520), Expect = 6.170e-65
Identity = 99/117 (84.62%), Postives = 112/117 (95.73%), Query Frame = 0
Query:    1 MAPKKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGD 117
            MAPK  A+SRSSKAGLQFPVGR+HR+LR GGYA+R+GAGAPVY+AAVMEYLTAEVLELAGNAARDNKK+RIIPRHIQLA+RNDEELNKLL +VTIASGGVLPNIH VL+P+KK+KG+
Sbjct:   95 MAPKGKAKSRSSKAGLQFPVGRVHRYLRDGGYAERIGAGAPVYLAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAIRNDEELNKLLADVTIASGGVLPNIHAVLLPKKKAKGE 211          
BLAST of Gchil6619.t1 vs. uniprot
Match: A0A7S0G427_9RHOD (Histone H2A n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G427_9RHOD)

HSP 1 Score: 201 bits (510), Expect = 1.390e-64
Identity = 101/118 (85.59%), Postives = 108/118 (91.53%), Query Frame = 0
Query:    4 KKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGDASQE 121
            KK+A SR+ KAGLQFPVGRIHR LRKGGYADRVGAGAPVY+AAV+EYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLL  VTIA+GGVLPNIH VL P+KK   DASQE
Sbjct:   10 KKSAVSRTKKAGLQFPVGRIHRHLRKGGYADRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIAAGGVLPNIHSVLTPKKKEAKDASQE 127          
BLAST of Gchil6619.t1 vs. uniprot
Match: A0A075B1L3_ROZAC (Histone H2A n=3 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B1L3_ROZAC)

HSP 1 Score: 197 bits (502), Expect = 2.900e-63
Identity = 98/116 (84.48%), Postives = 109/116 (93.97%), Query Frame = 0
Query:    2 APKKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSKGD 117
            A +  A+SRSSKAGLQFPVGR+HRFLRKG YA RVGAGAPVY+AAV+EYLTAE+LELAGNAARDNKKSRI+PRH+QLA+RNDEELNKLLGNVTIASGGVLPNIH+VL+P KKSK D
Sbjct:   12 ASQTKAKSRSSKAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIVPRHLQLAIRNDEELNKLLGNVTIASGGVLPNIHEVLVP-KKSKSD 126          
BLAST of Gchil6619.t1 vs. uniprot
Match: A0A0G2DVQ8_9EURO (Histone H2A n=5 Tax=saccharomyceta TaxID=716545 RepID=A0A0G2DVQ8_9EURO)

HSP 1 Score: 193 bits (490), Expect = 1.770e-61
Identity = 96/119 (80.67%), Postives = 109/119 (91.60%), Query Frame = 0
Query:    5 KTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSK-GDASQEV 122
            K+AQSRSSKAGL FPVGR+HR LRKG YA RVGAGAPVY+AAV+EYL AE+LELAGNAARDNKK+RIIPRH+QLA+RNDEELNKLLG+VTIA GGVLPNIHQ L+P+K +K G ASQE+
Sbjct:   14 KSAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKPGKASQEL 132          
BLAST of Gchil6619.t1 vs. uniprot
Match: A0A1X6P966_PORUM (Histone H2A n=3 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P966_PORUM)

HSP 1 Score: 192 bits (489), Expect = 2.360e-61
Identity = 97/122 (79.51%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    2 APKKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPRKKSK-GDASQEV 122
            A K   Q+RS+KAGLQFPVGRIHRFL+ GGY+DR+GAGAPVY+AAVMEYLTAEVLELAGNAARDNKK+RI+PRHIQLAVRND+ELNKLLG+VTIASGGVLP IH+ L+P+ K K G+ SQEV
Sbjct:    9 AGKAKPQTRSAKAGLQFPVGRIHRFLKSGGYSDRIGAGAPVYVAAVMEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDDELNKLLGHVTIASGGVLPFIHKDLLPKTKGKKGEQSQEV 130          
The following BLAST results are available for this feature:
BLAST of Gchil6619.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1H0_9FLOR4.360e-7897.54Histone H2A n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
Q7XY88_GRIJA2.010e-7497.48Histone H2A (Fragment) n=3 Tax=Rhodymeniophycidae ... [more]
R7QQ41_CHOCR5.740e-7394.12Histone H2A n=2 Tax=Chondrus crispus TaxID=2769 Re... [more]
A0A7J7IHZ2_9RHOD1.020e-6684.62Histone H2A n=1 Tax=Cyanidiococcus yangmingshanens... [more]
A0A5J4Z1G0_PORPP2.260e-6583.46Histone H2A n=2 Tax=Porphyridiaceae TaxID=2799 Rep... [more]
M1V984_CYAM16.170e-6584.62Histone H2A n=2 Tax=Cyanidioschyzon merolae (strai... [more]
A0A7S0G427_9RHOD1.390e-6485.59Histone H2A n=1 Tax=Rhodosorus marinus TaxID=10192... [more]
A0A075B1L3_ROZAC2.900e-6384.48Histone H2A n=3 Tax=Rozella allomycis (strain CSF5... [more]
A0A0G2DVQ8_9EURO1.770e-6180.67Histone H2A n=5 Tax=saccharomyceta TaxID=716545 Re... [more]
A0A1X6P966_PORUM2.360e-6179.51Histone H2A n=3 Tax=Porphyra umbilicalis TaxID=278... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 35..50
score: 81.73
coord: 64..78
score: 78.35
coord: 6..28
score: 72.01
coord: 50..63
score: 90.54
coord: 92..110
score: 69.82
IPR002119Histone H2ASMARTSM00414h2a4coord: 2..115
e-value: 3.4E-76
score: 269.1
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 6..114
IPR002119Histone H2ACDDcd00074H2Acoord: 3..112
e-value: 1.46997E-72
score: 209.884
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 4..81
e-value: 5.8E-17
score: 62.3
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 84..116
e-value: 2.3E-19
score: 68.8
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..121
e-value: 9.3E-64
score: 215.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 8..112
NoneNo IPR availablePANTHERPTHR23430:SF310HISTONE H2Acoord: 6..114
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 14..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:894740..895108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6619.t1Gchil6619.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 894740..895108 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6619.t1 ID=Gchil6619.t1|Name=Gchil6619.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=123bp
MAPKKTAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEY
LTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGV
LPNIHQVLMPRKKSKGDASQEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS