Gchil6599.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil6599.t1 vs. uniprot
Match: A0A2V3J096_9FLOR (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J096_9FLOR) HSP 1 Score: 218 bits (556), Expect = 5.150e-71 Identity = 111/144 (77.08%), Postives = 123/144 (85.42%), Query Frame = 0
Query: 1 MDDISPLKSAPQTSPSSLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREIRRALVEGREHSDTRKA--ILEWPIPEEF 142
MDD K A Q+S S+L AFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANL+LDNTVERL V NMYADVPMGIFVIRGENVMLLGEVDEEKE++VG+SM QVSE+EIR+ + + E+ KA +LEWPIPEEF
Sbjct: 1 MDDFMSSKPAVQSSSSNLSAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLVLDNTVERLTVNNMYADVPMGIFVIRGENVMLLGEVDEEKELKVGESMTQVSEKEIRKVIAKVNENGTLTKAGNVLEWPIPEEF 144
BLAST of Gchil6599.t1 vs. uniprot
Match: R7QB24_CHOCR (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB24_CHOCR) HSP 1 Score: 194 bits (494), Expect = 1.310e-60 Identity = 100/133 (75.19%), Postives = 112/133 (84.21%), Query Frame = 0
Query: 12 QTSPSSLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREIRRALVEGREHSDTRKA--ILEWPIPEEF 142
+T+ S A KLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERL V++ YADVP+GIFVIRGENVMLLGEVDEE+E+ VG SMKQV+E EIRRAL +E R+ +EWPIPEE+
Sbjct: 81 ETTQSGSGAIKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLTVEDSYADVPIGIFVIRGENVMLLGEVDEERELNVGSSMKQVTEPEIRRALAAIKEDRAARRRGEKVEWPIPEEY 213
BLAST of Gchil6599.t1 vs. uniprot
Match: A0A507E1X1_9FUNG (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E1X1_9FUNG) HSP 1 Score: 115 bits (289), Expect = 1.570e-30 Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREIRRALVEGREHSDTRK 131
LPG+ASL + +DK +LV LRD R GWLRS+DQ+ANL+L +TVER V + Y DV GIFVIRGENV+LLGE+D+EKE + S+K V E+R A + +E R+
Sbjct: 5 LPGSASLVDCVDKKILVILRDSRKLIGWLRSYDQFANLVLQDTVERTYVGDQYGDVYRGIFVIRGENVVLLGEIDKEKETALMKSLKNVPVAEVREAQKQEQERRKIRE 113
BLAST of Gchil6599.t1 vs. uniprot
Match: A0A293MTH1_ORNER (U6 snRNA-associated Sm-like protein LSm1 (Fragment) n=3 Tax=Ornithodoros TaxID=6937 RepID=A0A293MTH1_ORNER) HSP 1 Score: 115 bits (288), Expect = 2.500e-30 Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = 0
Query: 14 SPSSLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREI 116
S +++ F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y D+P GIF++RGENV+LLGE+D+EKE V ++++VS +EI
Sbjct: 2 SHNNMTLFYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVGKQYGDIPRGIFIVRGENVVLLGEIDQEKERLV--NLEEVSVQEI 102
BLAST of Gchil6599.t1 vs. uniprot
Match: A0A1Z5L2V0_ORNMO (U6 snRNA-associated Sm-like protein LSm1 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L2V0_ORNMO) HSP 1 Score: 114 bits (285), Expect = 2.880e-30 Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 0
Query: 14 SPSSLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREI 116
S +++ F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y D+P GIF++RGENV+LLGE+DEE+E V +++VS +I
Sbjct: 2 SQNNMTLFYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKQYGDIPRGIFIVRGENVVLLGEIDEERERAV--DLEEVSVEDI 102
BLAST of Gchil6599.t1 vs. uniprot
Match: A0A7S3GS20_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GS20_9STRA) HSP 1 Score: 113 bits (283), Expect = 7.540e-30 Identity = 54/105 (51.43%), Postives = 78/105 (74.29%), Query Frame = 0
Query: 19 DAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREIRRALVEG 123
++ LPGAASL EQ+D +L+ LRDGRN G LRSFDQY NLIL++T ER+ ++ Y D+P+G+F++RG+N++LLGEVDE+KE ++++VS E+ L G
Sbjct: 6 ESLYLPGAASLAEQIDTKILIVLRDGRNLVGILRSFDQYVNLILEDTYERVIFQDKYCDIPLGLFLVRGDNLILLGEVDEDKE--ASQNLEKVSPAELTELLASG 108
BLAST of Gchil6599.t1 vs. uniprot
Match: UPI000C75A328 (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75A328) HSP 1 Score: 114 bits (284), Expect = 8.970e-30 Identity = 52/94 (55.32%), Postives = 76/94 (80.85%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREI 116
LPG A+L E+LDK ++V LRDGR G+LRS DQ+ANL++ N +ER+ VK+ Y D+P+G+FV+RGENV+LLGE++E++E++ +KQVS +EI
Sbjct: 6 LPGTATLLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVIHNCIERIHVKDEYGDIPLGVFVVRGENVVLLGEIEEKEELK--GKLKQVSLKEI 97
BLAST of Gchil6599.t1 vs. uniprot
Match: UPI00142558C8 (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142558C8) HSP 1 Score: 113 bits (282), Expect = 1.850e-29 Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSEREI 116
LPG ASL E+LDK +LV LRDGR G LRS DQ+ANL+L T+ER+ V N Y D+P G+FVIRGENV+LLGE+D EK+ +V +K+VS EI
Sbjct: 7 LPGTASLIEELDKKLLVLLRDGRTLIGTLRSIDQFANLVLHKTIERIHVGNKYGDIPRGVFVIRGENVVLLGEIDSEKDPKV--ELKEVSIDEI 98
BLAST of Gchil6599.t1 vs. uniprot
Match: A0A6P7UPI0_IXOSC (U6 snRNA-associated Sm-like protein LSm1 n=4 Tax=Ixodes TaxID=6944 RepID=A0A6P7UPI0_IXOSC) HSP 1 Score: 112 bits (281), Expect = 2.480e-29 Identity = 58/115 (50.43%), Postives = 81/115 (70.43%), Query Frame = 0
Query: 21 FKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSER---EIRRALVEGREHSDTRKA 132
F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V+ Y D+P GIFV+RG+NV+LLGE+DE KE V +++VS E++R E ++ + ++A
Sbjct: 4 FYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEIDEAKERDV--DLEEVSVEQILEVQRLEAEAKQDQERQRA 116
BLAST of Gchil6599.t1 vs. uniprot
Match: A0A090X7S9_IXORI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A090X7S9_IXORI) HSP 1 Score: 112 bits (281), Expect = 4.370e-29 Identity = 58/115 (50.43%), Postives = 81/115 (70.43%), Query Frame = 0
Query: 21 FKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLAVKNMYADVPMGIFVIRGENVMLLGEVDEEKEIRVGDSMKQVSER---EIRRALVEGREHSDTRKA 132
F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V+ Y D+P GIFV+RG+NV+LLGE+DE KE V +++VS E++R E ++ + ++A
Sbjct: 4 FYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEIDEAKERDV--DLEEVSVEQILEVQRLEAEAKQDQERQRA 116 The following BLAST results are available for this feature:
BLAST of Gchil6599.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil6599.t1 ID=Gchil6599.t1|Name=Gchil6599.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=143bpback to top |