Gchil6591.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6591.t1
Unique NameGchil6591.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length182
Homology
BLAST of Gchil6591.t1 vs. uniprot
Match: A0A2V3J044_9FLOR (60S ribosomal protein L18a n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J044_9FLOR)

HSP 1 Score: 323 bits (828), Expect = 3.060e-111
Identity = 158/181 (87.29%), Postives = 167/181 (92.27%), Query Frame = 0
Query:    1 MTWLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDADLRFPLPHTRPRASTKSKRATYLATRPATCVS 181
            MTWLHQYHVVGRMVPGKGGSK  EETAVYRMRIFAPN VVAKSRFWYFLRKLKRVKKANGEILAVNE+ EKD STVKNIG+WLRYKSRSDTVNM+KE+RDVS+TGAVEQMYMEMSGRHRARWSSIQVL+V++ISDEDVRRP T Q LD DL+FPLPH RPRAS KSKRATYLA RP TC S
Sbjct:    1 MTWLHQYHVVGRMVPGKGGSKPGEETAVYRMRIFAPNPVVAKSRFWYFLRKLKRVKKANGEILAVNEIFEKDPSTVKNIGIWLRYKSRSDTVNMFKEFRDVSLTGAVEQMYMEMSGRHRARWSSIQVLRVRIISDEDVRRPNTMQFLDPDLKFPLPHVRPRASVKSKRATYLANRPTTCTS 181          
BLAST of Gchil6591.t1 vs. uniprot
Match: R7QCS4_CHOCR (60S ribosomal protein L18a n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCS4_CHOCR)

HSP 1 Score: 318 bits (815), Expect = 3.040e-109
Identity = 154/181 (85.08%), Postives = 169/181 (93.37%), Query Frame = 0
Query:    1 MTWLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDADLRFPLPHTRPRASTKSKRATYLATRPATCVS 181
            MTWLHQYHVVGRMVPGKGGSK DEETAVYRMRIFAPN VVAKSRFWYFLRKLKRVKKANGEIL+VNE+HEK++S VKNIGVWLRYKSRSDTVNMYKEYRDV++TGAVEQMYMEMSGRHRARWSSIQVLKV+ ++DEDVRRP T Q ++ DL+FPLPHTRPRASTKSKR T++ +RP T VS
Sbjct:    1 MTWLHQYHVVGRMVPGKGGSKPDEETAVYRMRIFAPNPVVAKSRFWYFLRKLKRVKKANGEILSVNEIHEKNISAVKNIGVWLRYKSRSDTVNMYKEYRDVTMTGAVEQMYMEMSGRHRARWSSIQVLKVQEVADEDVRRPNTLQFMETDLKFPLPHTRPRASTKSKRPTFMGSRPVTFVS 181          
BLAST of Gchil6591.t1 vs. uniprot
Match: UPI001E1DC756 (60S ribosomal protein L18a-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC756)

HSP 1 Score: 237 bits (605), Expect = 2.400e-77
Identity = 116/151 (76.82%), Postives = 131/151 (86.75%), Query Frame = 0
Query:   31 MRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDADLRFPLPHTRPRASTKSKRATYLATRPATCVS 181
            MRIFAPN VVAKSRFWYFLRKLKRVKKANGEIL+VNE+HE D+STVKN GVWLRYKSRSDTVNMYKEYRD+++TGAVEQMYME+SGRHRARWSSIQVLKV  + D  VRR  T Q+L  DL+FPLPHTRPR +  S++AT+ AT P T +S
Sbjct:   25 MRIFAPNEVVAKSRFWYFLRKLKRVKKANGEILSVNEIHESDISTVKNFGVWLRYKSRSDTVNMYKEYRDITMTGAVEQMYMELSGRHRARWSSIQVLKVAEVEDSAVRRDGTLQMLTKDLKFPLPHTRPRPAVPSQKATFRATAPVTFIS 175          
BLAST of Gchil6591.t1 vs. uniprot
Match: A0A7S1THG2_9RHOD (60S ribosomal protein L18a n=3 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THG2_9RHOD)

HSP 1 Score: 233 bits (594), Expect = 1.210e-75
Identity = 112/180 (62.22%), Postives = 141/180 (78.33%), Query Frame = 0
Query:    1 MTWLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDADLRFPLPHTRPRASTKSKRATYLATRPATCV 180
            M WLHQY V+GR +P    ++ + E  VYRM+IFAPN VVAKSRFW+F+ +LK VKKA+GE+++VNE+ EK    V+N G+WLRYKSRSD VNMYKEYRDV++TGAVEQMYMEMSGRHRARWSS+QVLKV ++  +D RRP T Q  +  LRFP+PH  PRA+ K  R T+ A+RP+T +
Sbjct:    1 MGWLHQYAVIGRKLP----TEENPEPEVYRMKIFAPNEVVAKSRFWFFVSQLKNVKKASGEVISVNELFEKRAGVVRNYGIWLRYKSRSDEVNMYKEYRDVTMTGAVEQMYMEMSGRHRARWSSVQVLKVVVVDAKDCRRPQTLQFHENKLRFPMPHKLPRANFKRHRTTFKASRPSTAI 176          
BLAST of Gchil6591.t1 vs. uniprot
Match: A0A7S0T4C8_9RHOD (60S ribosomal protein L18a n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4C8_9RHOD)

HSP 1 Score: 223 bits (569), Expect = 1.000e-71
Identity = 113/180 (62.78%), Postives = 141/180 (78.33%), Query Frame = 0
Query:    3 WLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLD-ADLRFPLPHTRPRASTKSKRATYLATRPATCVS 181
            WLHQY VVGR  P    S+ + E  V+RM+IFA N VVAKSRFW++LR+L++VKKANGEILAV E+ EKD  T+KN GVWLRYKSRSDTVNMYKE+RD  +T AVEQMY+EMSG HRARWSSIQVLKV+ +++ED RR  T Q+LD ++++FPLPH   R+  K  R+T+ + RP T +S
Sbjct:   10 WLHQYVVVGRKQP----SEAEPEPQVFRMKIFAQNTVVAKSRFWFYLRQLRKVKKANGEILAVEEVFEKDPGTIKNFGVWLRYKSRSDTVNMYKEFRDTHMTRAVEQMYLEMSGNHRARWSSIQVLKVQEVANEDCRRERTLQMLDESNIKFPLPHRVQRSYFKKHRSTFKSRRPVTVIS 185          
BLAST of Gchil6591.t1 vs. uniprot
Match: A0A7S0ZI05_9RHOD (60S ribosomal protein L18a n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI05_9RHOD)

HSP 1 Score: 222 bits (566), Expect = 2.870e-71
Identity = 110/180 (61.11%), Postives = 140/180 (77.78%), Query Frame = 0
Query:    3 WLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDAD-LRFPLPHTRPRASTKSKRATYLATRPATCVS 181
            WLHQY V GR +P    ++ D E  VYRM+IFAPN VVAKSRFW++L +L++VKKA+GEILAV E+ E++  ++KN GVW+RYKSRSDTVNMY+EYRD  +TGAVEQMYMEMSG HRARWS+IQVLKV  ++DED RRP T Q+ D + ++FPLPHT  R   K  R+++ + RP T +S
Sbjct:   10 WLHQYVVAGRKLP----TESDPEPVVYRMKIFAPNQVVAKSRFWFYLGQLRKVKKASGEILAVAEIFEENPGSIKNFGVWIRYKSRSDTVNMYREYRDTHMTGAVEQMYMEMSGNHRARWSAIQVLKVLEVADEDCRRPRTMQMHDEENIKFPLPHTVQRPYFKKHRSSFKSRRPVTMIS 185          
BLAST of Gchil6591.t1 vs. uniprot
Match: A0A5J4YWN7_PORPP (60S ribosomal protein L18a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWN7_PORPP)

HSP 1 Score: 219 bits (559), Expect = 3.220e-70
Identity = 111/180 (61.67%), Postives = 135/180 (75.00%), Query Frame = 0
Query:    3 WLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDAD-LRFPLPHTRPRASTKSKRATYLATRPATCVS 181
            WLH+Y VVGR  P    ++ + E  VYRM+IFAPN VVAKSR+WY+LR+LK++KKA+GE+L V E+ EKD  T+KN GVW+RYKSRSDTVNMY+EYRD  ++ AVEQMYMEMSG HRARWSSIQVLK + + DED RR    Q+ DAD +RFPLPH   RA  K  R  + A RP T +S
Sbjct:    9 WLHEYVVVGRKKP----TETEPEQPVYRMKIFAPNQVVAKSRYWYYLRQLKKMKKASGEVLGVYEIFEKDPLTIKNYGVWIRYKSRSDTVNMYREYRDTKISRAVEQMYMEMSGNHRARWSSIQVLKAEEVKDEDCRREHITQMHDADSIRFPLPHRVKRAYLKKHRGVFKAKRPMTMIS 184          
BLAST of Gchil6591.t1 vs. uniprot
Match: M2WQY2_GALSU (60S ribosomal protein L18a n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WQY2_GALSU)

HSP 1 Score: 218 bits (555), Expect = 1.040e-69
Identity = 106/179 (59.22%), Postives = 132/179 (73.74%), Query Frame = 0
Query:    2 TWLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDADLRFPLPHTRPRASTKSKRATYLATRPATCV 180
             WLHQY VVGR +P    ++ + E  +YR++IFAPN V AKSRFWYFLRKLKRVKK++GEIL ++E+ EK  + VKN G+W+RYKSRSDT+NMY+EYRDV+V GAVEQMY +MSGRHRARWSSI VLK   ++ +D RR    Q  D+ ++F LPH RPRA  K     + A RP T V
Sbjct:    3 AWLHQYSVVGRKIP----TQEEPEPPIYRLKIFAPNVVNAKSRFWYFLRKLKRVKKSSGEILNISEIFEKKSTQVKNYGIWIRYKSRSDTINMYREYRDVTVNGAVEQMYKDMSGRHRARWSSIWVLKAMPVAAKDCRRSKVTQFHDSKIKFALPHMRPRAPLKKYNTPFKAKRPTTIV 177          
BLAST of Gchil6591.t1 vs. uniprot
Match: A0A1D1YC45_9ARAE (60S ribosomal protein L18a (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YC45_9ARAE)

HSP 1 Score: 195 bits (496), Expect = 9.290e-61
Identity = 102/178 (57.30%), Postives = 130/178 (73.03%), Query Frame = 0
Query:    1 MTWLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDADLRFPLPHTRPRASTKSKRATYLATRPAT 178
            M   H+Y VVGR +P    S  D+   +YRMRIFAPN VVAKSRFWYFL+KLK+VKKA GEI+++NE+ EK    +KN G+WLRY SRS T NMYKEYR++S T AVE  Y +M+ RHRAR+SSIQ+++V  ++  +VRRP  +QLLD  L+FPLPH   R S    R+T+LA RP+T
Sbjct:    6 MGRFHEYQVVGRKLP----SPKDQIPQLYRMRIFAPNEVVAKSRFWYFLKKLKKVKKAAGEIVSINEIFEKRPLQIKNFGIWLRYDSRSGTHNMYKEYRELSRTDAVEAAYQDMAARHRARFSSIQIIRVATVTAANVRRPYIKQLLDPKLKFPLPHRVIRGS----RSTFLAKRPST 175          
BLAST of Gchil6591.t1 vs. uniprot
Match: A0A397JZT6_9GLOM (60S ribosomal protein L20 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JZT6_9GLOM)

HSP 1 Score: 194 bits (492), Expect = 3.310e-60
Identity = 96/178 (53.93%), Postives = 130/178 (73.03%), Query Frame = 0
Query:    1 MTWLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLRKLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRDVSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDADLRFPLPHTRPRASTKSKRATYLATRPAT 178
            M  LH+Y VVGR +P    S+HD    +YRMR+FAPN VV KSRFWYFL+KLK+VKKA GEI+++NE+ EK    +K+ G+WLRY SRS T NMYKEYR+++ T AV   Y +M+ RHRAR+SSIQ+++V ++    VRRP  +QLL+  L+FPLPH   R +   +++T+LA RP+T
Sbjct:    1 MGRLHEYQVVGRKLP----SQHDPVPRLYRMRLFAPNEVVGKSRFWYFLKKLKKVKKAAGEIVSINEIFEKRPLQIKSYGIWLRYDSRSGTHNMYKEYREMTRTDAVASCYQDMAARHRARFSSIQIMRVSVLKKSQVRRPYIRQLLEPKLKFPLPH---RVTRNGRKSTFLAKRPST 171          
The following BLAST results are available for this feature:
BLAST of Gchil6591.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J044_9FLOR3.060e-11187.2960S ribosomal protein L18a n=1 Tax=Gracilariopsis ... [more]
R7QCS4_CHOCR3.040e-10985.0860S ribosomal protein L18a n=1 Tax=Chondrus crispu... [more]
UPI001E1DC7562.400e-7776.8260S ribosomal protein L18a-like n=1 Tax=Mercenaria... [more]
A0A7S1THG2_9RHOD1.210e-7562.2260S ribosomal protein L18a n=3 Tax=Compsopogon cae... [more]
A0A7S0T4C8_9RHOD1.000e-7162.7860S ribosomal protein L18a n=2 Tax=Erythrolobus ma... [more]
A0A7S0ZI05_9RHOD2.870e-7161.1160S ribosomal protein L18a n=1 Tax=Timspurckia oli... [more]
A0A5J4YWN7_PORPP3.220e-7061.6760S ribosomal protein L18a n=1 Tax=Porphyridium pu... [more]
M2WQY2_GALSU1.040e-6959.2260S ribosomal protein L18a n=1 Tax=Galdieria sulph... [more]
A0A1D1YC45_9ARAE9.290e-6157.3060S ribosomal protein L18a (Fragment) n=1 Tax=Anth... [more]
A0A397JZT6_9GLOM3.310e-6053.9360S ribosomal protein L20 n=1 Tax=Diversispora epi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02113860S ribosomal protein L18a/ L20, eukaryotesPIRSFPIRSF002190Ribosomal_L18acoord: 1..180
e-value: 1.8E-67
score: 224.1
NoneNo IPR availableGENE3D3.10.20.10coord: 74..148
e-value: 3.2E-33
score: 115.8
NoneNo IPR availableGENE3D3.10.20.10coord: 1..72
e-value: 5.9E-31
score: 108.1
NoneNo IPR availablePANTHERPTHR10052:SF160S RIBOSOMAL PROTEIN L18Acoord: 3..179
NoneNo IPR availableSUPERFAMILY160374RplX-likecoord: 73..148
IPR023573Ribosomal protein 50S-L18Ae/60S-L20/60S-L18APFAMPF01775Ribosomal_L18Acoord: 4..131
e-value: 2.8E-48
score: 163.0
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aPANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 3..179
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aHAMAPMF_00273Ribosomal_L18Aecoord: 4..71
score: 19.952869

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:714346..714891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6591.t1Gchil6591.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 714346..714891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6591.t1 ID=Gchil6591.t1|Name=Gchil6591.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=182bp
MTWLHQYHVVGRMVPGKGGSKHDEETAVYRMRIFAPNAVVAKSRFWYFLR
KLKRVKKANGEILAVNEMHEKDMSTVKNIGVWLRYKSRSDTVNMYKEYRD
VSVTGAVEQMYMEMSGRHRARWSSIQVLKVKLISDEDVRRPATQQLLDAD
LRFPLPHTRPRASTKSKRATYLATRPATCVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021138Ribosomal_L18a/L20_eukaryotes
IPR023573Ribosomal_L18a//L18Ae/LX
IPR02887750S_L18Ae/Ribosomal_L18a/L20