Gchil6588.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6588.t1
Unique NameGchil6588.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length224
Homology
BLAST of Gchil6588.t1 vs. uniprot
Match: A0A2V3J029_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J029_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 9.880e-47
Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 0
Query:    1 MASGWAHFRKVWLKPEVYPLVGAMGAALGVMAVALVNKARSPNVAWNKSKRGSGTLYDDIDEVVPLWNDSKNNSTSIFQASSGIRDSKRQGRSDLGSFVIKAA 103
            MASGWAHFRKVWLKPEVYPL+GAM AALGVM  A++NKA SPNVAWNKSKR SG L+DD++EVVPLW+ +K NST+IF + SGI+D+K+    DLG+FVIK A
Sbjct:    1 MASGWAHFRKVWLKPEVYPLLGAMAAALGVMGAAIINKASSPNVAWNKSKRSSGGLFDDVEEVVPLWHTAKKNSTAIFSSDSGIQDAKKIITDDLGTFVIKTA 103          
BLAST of Gchil6588.t1 vs. uniprot
Match: A0A1X6PJJ0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJJ0_PORUM)

HSP 1 Score: 70.5 bits (171), Expect = 2.120e-11
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    2 ASGWAHFRKVWLKPEVYPLVGAMGAALGVMAVALVNKARS-PNVAWNKSKRGSGTLYD------DIDEVVPLWNDSKNNSTSIFQASSGIRDSKR 89
            A+ +A F+  W++PEVYPL  A+GAA+G+ +  +V+KA + P+V W+++ R SG          D   V PLW   K+ S  IF   + + D+KR
Sbjct:    3 ATKFASFKARWVRPEVYPLAAAIGAAVGLCSYFVVHKATADPSVTWDRTARASGVEAQYAGRVADDGSVTPLWGAVKSRSIRIFDTGNPVMDAKR 97          
BLAST of Gchil6588.t1 vs. uniprot
Match: A0A1X6PDF5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDF5_PORUM)

HSP 1 Score: 55.8 bits (133), Expect = 2.120e-6
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 0
Query:    3 SGWAHFRKVWLKPEVYPLVGAMGAALGVMAVALVNKARS-PNVAWNKSKRGSG-----------TLYDDI------------DEVV---PLWNDSKNNSTSIF-QASSGIRDSKRQ 90
            S WA+F++ +++PEV+PLVGA+G A+G+     V+KA + P V W+K  R +G            L DD+            DE      LW  +   ST IF +  + I  S RQ
Sbjct:    8 SKWANFKRYYVRPEVFPLVGAVGTAVGLFFFFGVHKASADPTVTWDKDVRNAGKGGGIGRDPAAVLADDVRPEMMDAAQLAADEGAWAGKLWASAVRRSTGIFTKTDNAITASNRQ 123          
The following BLAST results are available for this feature:
BLAST of Gchil6588.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J029_9FLOR9.880e-4771.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PJJ0_PORUM2.120e-1137.89Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PDF5_PORUM2.120e-633.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..36
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR010530NADH-ubiquinone reductase complex 1 MLRQ subunitPFAMPF06522B12Dcoord: 14..52
e-value: 3.1E-8
score: 33.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:708872..709543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6588.t1Gchil6588.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 708872..709543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6588.t1 ID=Gchil6588.t1|Name=Gchil6588.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=224bp
MASGWAHFRKVWLKPEVYPLVGAMGAALGVMAVALVNKARSPNVAWNKSK
RGSGTLYDDIDEVVPLWNDSKNNSTSIFQASSGIRDSKRQGRSDLGSFVI
KAAADEEEEEEEQQQQQQQQQQSDESDEATEEQASVAQSVEHVMEQVTNQ
VSDESAETQASVVQSVAHVLDESADAINAAVDAALRTAEDVSESVSESVV
ESVAPPLPTADVQPAPADASQSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010530B12D