Gchil6547.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6547.t1
Unique NameGchil6547.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length551
Homology
BLAST of Gchil6547.t1 vs. uniprot
Match: A0A2V3IYD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD1_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 1.130e-96
Identity = 179/441 (40.59%), Postives = 255/441 (57.82%), Query Frame = 0
Query:   52 NRAFLMNALTPPIGFVNITADT--PGKYVFGAGRFKPNLQFLRPKWFERRICSKRCDEVILGYVSILLITVLTEIVLNFLKSLVPDVCFFVNPSQKHDRRDWE-EIADGVQTLLSYRFLNL--------WSRYRSGQKFRFR-TVLMVVLALSIFLLDGSLIILTQPNQYPSEQYEYNLLGSHPIGADDGLGKFLRRNARERPCITPVFYESNPIRNYSLSTCHTFDLREAHQQAEDSVNYVKIGSWFHKGGSDHHISFGNASIKIKARAIIYGAEGGTWRLLFPILYNNHIRITHYLHQRVIGKILKDSCRAERSPRSCSELIVGHRIDLKLVTKEILLWVPRNRGINRKEHVRGLETTVRAGIKQPWETVFQSLGPLMTTELIQEVKGPSSYAHIATEEERQGIPGLLYLERRKVSAVLLLLCFPIAALVLCCVKLFWR 480
            NR  L      P GFV +  ++  PG+YV G   F  N    +P    R +     +E +LG +SI +I V+TE++L FL              ++ D  D E E A     +  Y  LN+        W R R GQ+ +   TV +  +   I L+D   I LTQP+   S+  +YNL G+HPI A  GLGKFLRR A ERPC+TP+F  SNP+RN+S+S C T  L +AH +  D+VN +K GSWFH+GG DH I+FGNASI +K R  +YG E GT R+LF +LY +++    YLH+ V+  I+++SC A  + R+C E++  HR +   V + ++LW  R +G  R+E V GLET +   I++PW TVF+ +GPL+TTE + EV+GP SY+HI TEE ++ I GLL  E R +  + +LL   +    L C + + R
Sbjct:    4 NRTILTTIPEAPYGFVEVLPESQVPGQYVVGQSSFTGNPDIKKPFLLIRNVGGS-AEEFMLGLLSIFMIMVVTELLLTFLSR------------KRSDIDDEENEYAYAAVRVDEYLRLNMERALRREGWPR-RVGQRRKVHLTVTVFAVGAVILLIDTGTIFLTQPSISVSKPGDYNLKGTHPIAASPGLGKFLRRTAIERPCVTPIFSNSNPLRNFSMSACTTLGLEQAHTRVTDTVNTIKFGSWFHEGGGDHIITFGNASITMKTRLFLYGVENGTRRILFSMLYEDYLPAIRYLHELVMYGIMEESCNANYATRTCDEVLKEHRSESTPVNRTLVLWTTR-KG-KRRESVLGLETNLFLEIRKPWVTVFKRVGPLLTTEQVTEVEGPGSYSHINTEERQENIRGLLVQESRNLGVIGMLLADSVLVAFLVCARRYCR 428          
BLAST of Gchil6547.t1 vs. uniprot
Match: A0A2V3IZE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZE0_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 6.330e-87
Identity = 173/459 (37.69%), Postives = 255/459 (55.56%), Query Frame = 0
Query:   52 NRAFLMNALTPPIGFVNITADT--PGKYVFGAGRFKPNLQFLRPKWFERRICSKRCDEVILGYVSILLITVLTEIVLNFLKSLVPDVCFFVNPSQKHDRRDWEEIADGVQTLLSYRFLNL-----WSR--YRSGQKFRFRTVLMVVLALSIFLLDGSLIILTQPNQYPSEQYEYNLLGSHPIGADDGLGKFLRRNARERPCITPVFYESNPIRNYSLSTCHTFDLREAHQQAEDSVNYVKIGSWFHKGGSDHHISFGNASIKIKARAIIYGAEGGTWRLLFPILYNNHIRITHYLHQRVIGKILKDSCRAERSPRSCSELIVGHRIDLKLVTKEILLWVPRNRGINRKEHVRGLETTVRAGIKQPWETVFQSLGPLMTTELIQEVKGPSSYAHIATEEERQGIPGLLYLERRKVSAVLLLLCFPI-AALVLCCVKL-----FWRKAY--HSSDHSKSDL 493
            N   L     PP  FV +  ++  PG+YV G   F  N    RP +  +++     +  ++G +S  +ITV+T++VL          C     S   +  ++   A  V   L            W R  YR  +    + VL  V+++ IFL+D   IILTQP    S+  +YNL G+HPI AD   G+  R+   E PCITPVF  SNP RN+S+S C  F L EAH +  D+VN ++IGSWFH+GG DH ++FGNA+I+IK R  +YG E GT R+LF +LY +++    YLH+ V+  I+++SC A+ + R+C E++  HR +     + ++LW  R +G  RKE V GLE+ +   I QPW TVF+++GPL+T E + EV GP SY+HI+TE   Q + GLL  E R +    L+L   + +A ++C  KL        KA+  ++SD S  D+
Sbjct:    4 NGTVLTTIPEPPPKFVQVLPESQLPGQYVIGQSSFTSNPDINRPFFLVQKVGGSAAEAFVVGLLSTWMITVITKLVLT---------CLSRERSIDDEENEYAYAAVRVDEFLRKSRREALRRKGWPRGVYRKKKACLIQMVL--VISVVIFLIDICTIILTQPRISVSKPGDYNLKGTHPIAADREEGEEFRKTVIETPCITPVFSSSNPSRNFSISACTIFGLEEAHTRVTDTVNTIRIGSWFHEGGGDHIVTFGNATIRIKTRLFLYGVENGTRRILFSMLYEDYLPAIKYLHELVMYGIMEESCTAKYATRTCDEVLKEHRSESTPANRTVVLWTTR-KG-KRKETVVGLESNLFLEISQPWATVFRNVGPLLTGEQVTEVDGPGSYSHISTENREQNLHGLLVQETRYLGMFGLILADSVLSAFLICATKLCRPVFLSHKAWDLYTSDASAEDM 449          
BLAST of Gchil6547.t1 vs. uniprot
Match: A0A2V3IY15_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY15_9FLOR)

HSP 1 Score: 259 bits (663), Expect = 1.590e-76
Identity = 132/309 (42.72%), Postives = 189/309 (61.17%), Query Frame = 0
Query:  170 WSRYRSGQKFRFRTVLMVVLALSIFLLDGSLIILTQPNQYPSEQYEYNLLGSHPIGADDGLGKFLRRNARERPCITPVFYESNPIRNYSLSTCHTFDLREAHQQAEDSVNYVKIGSWFHKGGSDHHISFGNASIKIKARAIIYGAEGGTWRLLFPILYNNHIRITHYLHQRVIGKILKDSCRAERSPRSCSELIVGHRIDLKLVTKEILLWVPRNRGINRKEHVRGLETTVRAGIKQPWETVFQSLGPLMTTELIQEVKGPSSYAHIATEEERQGIPGLLYLERRKVSAVLLLLCFPIAALVLCCVKLF 478
            W R    ++  +  V ++ + + +F+++   I+ TQP    S+  +YNL G+HPI A  G  KFLRR  RERPCITPVF  SNP RN+S+S C  F L EAH +  D+VN +KIGSWFH+GG DH I+FGNA I IK + ++YG  GGT RLLF +LY +++    YLH+ V+  I++++C A+ + R+C E++  HR +     + +++W  R     RKE V GLET +   I +PW TVF+ +GPL+T E + EVKGP  Y+H  T E  Q + GLL  E R +    + L   +   VL C+  F
Sbjct:   42 WPRSVEPRQKPYLLVTVLAMGILMFVMNAVAILCTQPRISVSKPGDYNLKGTHPIAAGHGNAKFLRRIGRERPCITPVFSSSNPSRNFSISACTIFGLEEAHTRDTDTVNTIKIGSWFHEGGGDHIITFGNARITIKTKLLLYGVAGGTRRLLFSMLYEDYLPAVRYLHELVMYGIMEETCTAKYATRTCDEVLKEHRSESTPTNRTVVVWTTRKE--KRKETVVGLETNLFLEINKPWVTVFKRVGPLLTAEQVTEVKGPGCYSHTETGEREQNLHGLLVQETRFLGVFGMTLADVVLLGVLLCLTKF 348          
The following BLAST results are available for this feature:
BLAST of Gchil6547.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYD1_9FLOR1.130e-9640.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IZE0_9FLOR6.330e-8737.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY15_9FLOR1.590e-7642.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 480..550
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 204..457
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 458..479
NoneNo IPR availableTMHMMTMhelixcoord: 108..129
NoneNo IPR availableTMHMMTMhelixcoord: 181..203
NoneNo IPR availableTMHMMTMhelixcoord: 457..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:547183..548835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6547.t1Gchil6547.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 547183..548835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6547.t1 ID=Gchil6547.t1|Name=Gchil6547.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=551bp
MILTRAKLQEQRTTFLCTPITEKQRLLHRLPCVRGVECFSDAYLAPYASH
SNRAFLMNALTPPIGFVNITADTPGKYVFGAGRFKPNLQFLRPKWFERRI
CSKRCDEVILGYVSILLITVLTEIVLNFLKSLVPDVCFFVNPSQKHDRRD
WEEIADGVQTLLSYRFLNLWSRYRSGQKFRFRTVLMVVLALSIFLLDGSL
IILTQPNQYPSEQYEYNLLGSHPIGADDGLGKFLRRNARERPCITPVFYE
SNPIRNYSLSTCHTFDLREAHQQAEDSVNYVKIGSWFHKGGSDHHISFGN
ASIKIKARAIIYGAEGGTWRLLFPILYNNHIRITHYLHQRVIGKILKDSC
RAERSPRSCSELIVGHRIDLKLVTKEILLWVPRNRGINRKEHVRGLETTV
RAGIKQPWETVFQSLGPLMTTELIQEVKGPSSYAHIATEEERQGIPGLLY
LERRKVSAVLLLLCFPIAALVLCCVKLFWRKAYHSSDHSKSDLGVVSSDQ
VSLNNFSESVGSDKEATDPISSELHSVFCSQDDVTRKIEQETTSSLNSGG
*
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