Gchil6543.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6543.t1
Unique NameGchil6543.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length168
Homology
BLAST of Gchil6543.t1 vs. uniprot
Match: A0A2V3IY46_9FLOR (Nucleolar protein 16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY46_9FLOR)

HSP 1 Score: 236 bits (602), Expect = 2.940e-77
Identity = 123/162 (75.93%), Postives = 142/162 (87.65%), Query Frame = 0
Query:    1 MGKPRPGSRRGMTKLYKSAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQASVNHIKKTVSERKVSIPIKSISKGSEAVVMELEKEAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVERMRSIDA 162
            MGKPRPGSR+GMTKLYKSAKR+A+KKAAQQRSIRPR+S V H+T+RS WDSRLTP  N+ KIGLQASVNH+ KT   RKVSIPI++I K +EAV+ +LEKEA+R+ER+N VV PGERRALEAMI+RHG NW AM RDIKLNYLQWT  QLQ+KVERMR+IDA
Sbjct:    1 MGKPRPGSRKGMTKLYKSAKRTARKKAAQQRSIRPRSSKVVHETVRSTWDSRLTPGNNLKKIGLQASVNHMAKTRGGRKVSIPIQAIPKDAEAVIEDLEKEASRKERRNLVVHPGERRALEAMIKRHGDNWTAMCRDIKLNYLQWTATQLQRKVERMRAIDA 162          
BLAST of Gchil6543.t1 vs. uniprot
Match: R7Q5J5_CHOCR (Nucleolar protein 16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5J5_CHOCR)

HSP 1 Score: 136 bits (343), Expect = 6.590e-38
Identity = 80/163 (49.08%), Postives = 110/163 (67.48%), Query Frame = 0
Query:    1 MGKPRPGSRRGMTKLYKSAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQASVNHIKKTVSERKVSIPIKSI--SKGSEAVVMELEKEAAREERK-NNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVERMRSI 160
            M K RPGSR+ MTKL  ++K++A+++AA+Q +       + H  +R AWD R +P  N+  +GL  SVN I K+  +   +I I  I  S     V+ +L+ EA + ER+ NNVV PGERRALE M++R+G +WE MARDIKLNYLQWTP +LQ+KVERM +I
Sbjct:    1 MVKQRPGSRKDMTKLGTASKKAARRQAAKQANGLANRRTIVHPAMRGAWDHRKSPASNLASVGLTGSVNKISKSRDKIGRTIEIAPIPTSVPHNHVLQKLQDEANKPEREPNNVVHPGERRALEKMVKRYGDDWEKMARDIKLNYLQWTPRKLQRKVERMNAI 163          
BLAST of Gchil6543.t1 vs. uniprot
Match: A0A667Z422_9TELE (Nucleolar protein 16 n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Z422_9TELE)

HSP 1 Score: 60.8 bits (146), Expect = 1.620e-8
Identity = 41/140 (29.29%), Postives = 79/140 (56.43%), Query Frame = 0
Query:   25 KKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQASVNHIKKTVSERKV------SIPIKSISKGSEAVVMELEKEAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVERMR 158
            +K  +++ ++ +A  + +  IR+AWD+R +  +N+ ++GL    N       +R +      + P+ +++K    V+ +LE+EA+R E+    +        + MIR HG N++AMARD K NY Q TP Q+++K++  +
Sbjct:   17 RKKLKKKFLKKQAPRIENSQIRNAWDNRKSMARNLQEMGLTFDPNRTLPIKKQRILPGGTGTTAPVPTVTKPY--VLHQLEEEASRPEKDTKTLSTDLMEYAQHMIREHGDNYKAMARDEK-NYYQDTPKQIKRKIDEYK 153          
BLAST of Gchil6543.t1 vs. uniprot
Match: UPI00199CB3C3 (nucleolar protein 16 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00199CB3C3)

HSP 1 Score: 60.5 bits (145), Expect = 2.100e-8
Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = 0
Query:   16 YKSAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQ---ASVNHIKKTVSERKVSIPIKSISKGSEAVVMELEKEAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVE 155
            Y   ++  KKK  ++   RPR        IR AWD+  T ++NM  +GL     SV  I   VSE    + IK        V+ ELE+EA++  +            ++ MIR HG+N++AMARD K NY Q TP Q+++KVE
Sbjct:   13 YNVDRKKLKKKMIKK--YRPRIECAQ---IRKAWDTNKTTKQNMKDMGLSFGTKSVLPITSKVSEEPEDLVIKPY------VIRELEEEASQLRKDTTTCSTDMIEFVQHMIREHGENYKAMARDEK-NYYQDTPKQIRRKVE 143          
BLAST of Gchil6543.t1 vs. uniprot
Match: A9V334_MONBE (Nucleolar protein 16 n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V334_MONBE)

HSP 1 Score: 60.5 bits (145), Expect = 3.050e-8
Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = 0
Query:    1 MGKPRPGSRRGMTKLYKSAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQASVNHIKKTVSERK------VSIPIKSISKGSEAVVMELEKEAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVER 156
            MG PR   +     + K   R AKK++ +QR+ + +   + + TI  AWD + +   N  ++GL    N      + R+      ++ P +  ++    VV ELE+ AA  +        GE   +++ I++HG +++AMA+D+KLN  Q T NQLQ+KV +
Sbjct:    1 MGNPRQKRKLRAGHVKKQTARQAKKRSERQRTTKVQ---IQNSTIARAWDPKKSLLDNFRELGLVVDTNVDLSGDAHRQKLRGGGITAPAREPTE----VVRELEQRAASVKTYKTFAARGEIIFIQSCIQKHGLDYDAMAKDLKLNTYQHTANQLQRKVNK 155          
BLAST of Gchil6543.t1 vs. uniprot
Match: UPI0006D4FF1A (nucleolar protein 16-like n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4FF1A)

HSP 1 Score: 59.7 bits (143), Expect = 4.230e-8
Identity = 47/155 (30.32%), Postives = 86/155 (55.48%), Query Frame = 0
Query:   12 MTKLYKSAKRSAKKKAAQQRSIRPRASIVPH---DTIRSAWDSRLTPEKNMFKIGLQASVN-HIKKTVSERKVSI--PIKSISKGSEAVVMELEKEAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVERMRSI 160
            MTKL K  KR   +    ++ +R + + +P+   D +++ WD + +   N+ ++GL    N +IK   ++ K++   P  S+      VV +LE EA    ++N  +   +   +   I ++ +++EAMA+D KLN+LQ+TPNQL+ K+   +SI
Sbjct:    1 MTKLRKQRKRKVYRFDVNRKRMRKKMNRLPNIQCDQLKTEWDKKKSTRTNLEQMGLVYDPNKNIKIPSNKPKLNKAEPEPSVITEKTHVVRDLEVEAKAPRQRNFKLPKSQVDWICKCIDKYNEDYEAMAKDRKLNFLQYTPNQLRTKINVFKSI 155          
BLAST of Gchil6543.t1 vs. uniprot
Match: A0A5J4YSW2_PORPP (Nucleolar protein 16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSW2_PORPP)

HSP 1 Score: 57.4 bits (137), Expect = 2.650e-7
Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 0
Query:   18 SAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQASVNHIKKTVSERKVSIPIKSISKGSEAVVMELEKEAAREERKN-NVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVER 156
            SA++  +K+   Q++ +     V   T+R AWD+     +N+  IGL A  N          ++   K+      AVV  +E+ AA  E++       GE + LE +I +HG ++EAMARDIK+N +Q T   L+++V R
Sbjct:   15 SAQKRHRKRLHSQKTGKVFKQHVADATVREAWDNSKNVRENLDAIGLAARAN--------APLNNKAKASGDAQTAVVARMEELAAVGEKEAPRHPAEGEAQVLEKLIAKHGDDYEAMARDIKINTMQHTSRVLERRVRR 146          
BLAST of Gchil6543.t1 vs. uniprot
Match: K3WXR7_GLOUD (Nucleolar protein 16 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXR7_GLOUD)

HSP 1 Score: 57.4 bits (137), Expect = 3.030e-7
Identity = 48/154 (31.17%), Postives = 74/154 (48.05%), Query Frame = 0
Query:   13 TKLYKSAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQASVNHIKKTVSERKVSIPIKSISKGSEAVVMELEKEAAREERK----NNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVERMRSIDA 162
            TK+ +  K   K+     R  + R   V    I+  WD +LT  +N  KIGLQ + N  K    E K SI     +   E     +       ER      N +   E + L  +I +HG++++AM RDIK+N +QWT N+L+++  R+  +DA
Sbjct:    6 TKIKQRGKVKVKRNLKPLRKFKNR--FVGDVRIQKQWDHKLTTRQNYEKIGLQVNPNSHK----ELKQSIEGAEGALDDEPQFFHVPDSDFLSERNPRRPENYMSEEEIKYLRPLIAKHGEDYKAMERDIKVNNMQWTENKLKRRCARLALLDA 153          
BLAST of Gchil6543.t1 vs. uniprot
Match: A0A024U0D1_9STRA (Nucleolar protein 16 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0D1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.180e-7
Identity = 40/124 (32.26%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   42 HDTIRSAWDSRLTPEKNMFKIGLQASVN---HIKKTVSERKVSIPIKSISKGSEAVVMELEKEAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKVERMRSIDA 162
            HD  +  WD +LT  +N  KIGL    N   HI++   E  V  P +        V+   +K   + E   N +   E + L  ++++HG +++AMARDIK+N  QWT  +L+++  R++ +DA
Sbjct:   18 HDVAQEVWDHKLTTAQNYDKIGLWKDPNAIKHIRECTDE--VIDPDELFDVPDSDVLSFQDKNHKKAE---NHMSELEIQYLRPLVKKHGDDYDAMARDIKVNNEQWTVAKLKRRCARLKLVDA 136          
BLAST of Gchil6543.t1 vs. uniprot
Match: A0A8C6T6I7_9GOBI (Nucleolar protein 16 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6T6I7_9GOBI)

HSP 1 Score: 55.8 bits (133), Expect = 1.340e-6
Identity = 48/145 (33.10%), Postives = 80/145 (55.17%), Query Frame = 0
Query:   16 YKSAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWDSRLTPEKNMFKIGLQASVNH---IKKTVSERKVSI---PIKSISKGSEAVVMELEKEAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQLQKKV 154
            Y   ++  KKKA ++ + R     + ++ IR+AWD   +  +N+ ++GL    N    IKKT    K S+   P+  ++K    V+ +LE+EA   E+ +  +       ++ MIR HG N++AMARD K NY Q TP Q+++K+
Sbjct:   15 YSKNRKKLKKKALKKYNPR-----IENEQIRNAWDKNKSMARNLQEMGLAFDPNRSLPIKKTKLIGKESVSKAPVGIVTKPY--VLTKLEEEANLPEKGSKSLSSDLIEYVQYMIREHGDNYKAMARDEK-NYYQDTPKQIKRKI 151          
The following BLAST results are available for this feature:
BLAST of Gchil6543.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IY46_9FLOR2.940e-7775.93Nucleolar protein 16 n=1 Tax=Gracilariopsis chorda... [more]
R7Q5J5_CHOCR6.590e-3849.08Nucleolar protein 16 n=1 Tax=Chondrus crispus TaxI... [more]
A0A667Z422_9TELE1.620e-829.29Nucleolar protein 16 n=1 Tax=Myripristis murdjan T... [more]
UPI00199CB3C32.100e-836.36nucleolar protein 16 n=1 Tax=Silurus meridionalis ... [more]
A9V334_MONBE3.050e-830.25Nucleolar protein 16 n=1 Tax=Monosiga brevicollis ... [more]
UPI0006D4FF1A4.230e-830.32nucleolar protein 16-like n=1 Tax=Halyomorpha haly... [more]
A0A5J4YSW2_PORPP2.650e-732.14Nucleolar protein 16 n=1 Tax=Porphyridium purpureu... [more]
K3WXR7_GLOUD3.030e-731.17Nucleolar protein 16 n=1 Tax=Globisporangium ultim... [more]
A0A024U0D1_9STRA5.180e-732.26Nucleolar protein 16 n=1 Tax=Aphanomyces invadans ... [more]
A0A8C6T6I7_9GOBI1.340e-633.10Nucleolar protein 16 n=1 Tax=Neogobius melanostomu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..28
IPR019002Ribosome biogenesis protein Nop16PFAMPF09420Nop16coord: 88..157
e-value: 7.5E-16
score: 58.8
coord: 19..89
e-value: 5.0E-6
score: 26.7
IPR019002Ribosome biogenesis protein Nop16PANTHERPTHR13243HSPC111 PROTEIN-RELATEDcoord: 1..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:460097..460600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6543.t1Gchil6543.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 460097..460600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6543.t1 ID=Gchil6543.t1|Name=Gchil6543.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=168bp
MGKPRPGSRRGMTKLYKSAKRSAKKKAAQQRSIRPRASIVPHDTIRSAWD
SRLTPEKNMFKIGLQASVNHIKKTVSERKVSIPIKSISKGSEAVVMELEK
EAAREERKNNVVRPGERRALEAMIRRHGKNWEAMARDIKLNYLQWTPNQL
QKKVERMRSIDAMTAKC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019002Ribosome_biogenesis_Nop16