Gchil6533.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6533.t1
Unique NameGchil6533.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length589
Homology
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BLAST of Gchil6533.t1 vs. uniprot
Match: A0A2V3J5U7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U7_9FLOR)

HSP 1 Score: 552 bits (1422), Expect = 2.290e-189
Identity = 296/547 (54.11%), Postives = 375/547 (68.56%), Query Frame = 0 
Query:   48 GPPAVPDFIKRLDMLEFQRRQGATPMPSLPPEVLQFLRDEYPRIKKLDEIMEVEMKRDDYDPNDHRVYSWAYNYLRPHAMGRSLQALIACLVTYSTVKLVQYVRSRISQTVLMSALVSADTVFTATLAGAFPAFLLSWALHRARFNDVRTDGVRRSVVMFCLTAVALLGVWAMAATANIKLALMSSIFVRYMLFIPVWGWMDIRREATLGQTPLAKLYKAWRLAATVAVLFYGSMLRLLALCVPQEFP-SQVFGHRAELFRLALWKRFPVSCSLCNDPRGLFFMGGLVVAGLLVYTLYLIIFVTDCCRINFHRECESVLTSFCLKKGAYQPNRHPDDITCSLSARNPDESFLPSRPIMLRPDEDQLATSSAVMVDDTIPVFAYLDREKEIMKQTGVTEWLKYRSEQVPADTEEEKEERDAKALLSWARALKPEEEKLSIEDYFQTVEDDEYFYDPTTGNWLFVE--GSDGRKADAEDPNVDGGSNGSGNAQNW-INLSTEEEVEIPPEWEPIVQRMLEQN--NKFDDKTPQTDDEEDSGSSSLSVYV 588
            GPP +PD IKRLD  E +RRQ   P P LPP   + L D+YP ++K+ E M  EM  DDYDP D+RVYSWAY  LRP A+G  L +LI     ++ VKL+QY+R+ + + +L + LV+ADTV T  L G  P  LLSWA  +A FNDVRTDGVRRSV MFCLTA+AL  VWAM+AT N+ L +  ++FVR+ML   +WGW+D+RREA LG   LA++YKAWR   TV VL +GS+LR +A   P E P  +VFG  A   R AL KRFPV+CSLCNDPRGLF  GGL +  L+ Y LYL +FVT+  +IN HR CES LTS  +KKG YQPNRHPD+   SLSA +P  SF PS  +MLRP +D  +++   +    +PVFAYL +E+E+MK TG+TEWLK RSEQVPA  +E + ERD  ALLSWAR LKPEEE+LSI+DY QTVEDDEY YDPTTGNW+F +     G++ D  D   D         Q + +N   +E VEIPPEWEP+V+RMLE+N  + F+++  Q  D+ DS S  +S++ 
Sbjct:    3 GPPPIPDSIKRLDEFELERRQKPMPNP-LPPHFFESLFDQYPSVRKVHEAMTREMASDDYDPEDYRVYSWAYQQLRPTAIGLPLLSLIVGTTAFAIVKLIQYIRANLEKQILANMLVTADTVATGVLTGFIPVILLSWAWQKAHFNDVRTDGVRRSVTMFCLTALALPAVWAMSATTNVTLGIACALFVRFMLAFSIWGWVDLRREAFLGDALLARVYKAWRSCLTVGVLIFGSLLRSMAFLAPHEVPVKEVFGRHANSLRQALGKRFPVACSLCNDPRGLFLAGGLAIIALVSYVLYLAVFVTEFYQINCHRRCESPLTSLFVKKGIYQPNRHPDESKGSLSAPDPSMSFHPSPAMMLRPTKDWDSSTVQPLSGTNMPVFAYLKKEEEVMKTTGLTEWLKPRSEQVPAYDDESRMERDLDALLSWARPLKPEEEELSIDDYVQTVEDDEYMYDPTTGNWIFTDDLAESGKRKDGMDDRSD-------KMQPFELNGEEDEMVEIPPEWEPLVKRMLEKNAEHPFENQDDQQVDD-DSDSPPVSIFA 540
The following BLAST results are available for this feature:
BLAST of Gchil6533.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5U7_9FLOR2.290e-18954.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 526..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..576
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..266
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..349
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 267..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 350..588
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 288..326
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 184..203
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..183
NoneNo IPR availableTMHMMTMhelixcoord: 168..187
NoneNo IPR availableTMHMMTMhelixcoord: 226..248
NoneNo IPR availableTMHMMTMhelixcoord: 268..290
NoneNo IPR availableTMHMMTMhelixcoord: 327..349
NoneNo IPR availableTMHMMTMhelixcoord: 200..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:408487..410253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6533.t1Gchil6533.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 408487..410253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6533.t1 ID=Gchil6533.t1|Name=Gchil6533.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=589bp
MLTLHVGFVPLVPVFRKRVSRKRPRSTCCTASNASQPDELPDFAAKLGPP
AVPDFIKRLDMLEFQRRQGATPMPSLPPEVLQFLRDEYPRIKKLDEIMEV
EMKRDDYDPNDHRVYSWAYNYLRPHAMGRSLQALIACLVTYSTVKLVQYV
RSRISQTVLMSALVSADTVFTATLAGAFPAFLLSWALHRARFNDVRTDGV
RRSVVMFCLTAVALLGVWAMAATANIKLALMSSIFVRYMLFIPVWGWMDI
RREATLGQTPLAKLYKAWRLAATVAVLFYGSMLRLLALCVPQEFPSQVFG
HRAELFRLALWKRFPVSCSLCNDPRGLFFMGGLVVAGLLVYTLYLIIFVT
DCCRINFHRECESVLTSFCLKKGAYQPNRHPDDITCSLSARNPDESFLPS
RPIMLRPDEDQLATSSAVMVDDTIPVFAYLDREKEIMKQTGVTEWLKYRS
EQVPADTEEEKEERDAKALLSWARALKPEEEKLSIEDYFQTVEDDEYFYD
PTTGNWLFVEGSDGRKADAEDPNVDGGSNGSGNAQNWINLSTEEEVEIPP
EWEPIVQRMLEQNNKFDDKTPQTDDEEDSGSSSLSVYV*
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