Gchil6532.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6532.t1
Unique Name	Gchil6532.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	288

Homology

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BLAST of Gchil6532.t1 vs. uniprot
Match: A0A2V3J5N0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N0_9FLOR)

HSP 1 Score: 167 bits (422), Expect = 7.810e-46
Identity = 88/184 (47.83%), Postives = 120/184 (65.22%), Query Frame = 0

Query:   10 QPGAARPAQAPLPSEPPQKKQRAAHLIPKLTVGDFSEASLQEAIKIGRRAKARGKPREGREAKVLGDLLRNMSVWARELAPQYSFSEFIFASQALGTNRSLRPMLANLRLAEFREVNAEFEGNPSLDQCAVAQPAGRDATQNESGIQVAAEAPPDGIDAIEWGNE-RDEWEEEEAMMDRMHMEV 192
            Q G  RP+Q    SEPP+KK RAAHL+PKL+  DF+  ++++ IKIGRR KARG P+ G EA+ L  LLR M+ WA+++APQYS  EF+FASQA+GTNRSLRP+LAN RLAE REVNAE                         G Q+ A+ PP G ++  W +E  D WE+++A++ ++ M++
Sbjct:   10 QVGQTRPSQPLSSSEPPKKKHRAAHLMPKLSADDFTIKAIEDVIKIGRRTKARGPPKPGNEAQALSSLLRRMTAWAKQVAPQYSLPEFMFASQAIGTNRSLRPILANFRLAELREVNAEXXXXXXXXXXXXXXXXXXXXXXQTDG-QIVADVPPPGFESTTWNDEPNDGWEDDDALVAQLEMDI 192

The following BLAST results are available for this feature:

BLAST of Gchil6532.t1 vs. uniprot

BLAST of Gchil6532.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5N0_9FLOR	7.810e-46	47.83	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012923	Chromosome segregation in meiosis protein 3	PFAM	PF07962	Swi3	coord: 61..120 e-value: 1.7E-7 score: 31.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..253

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004390_pilon	contig	tig00004390_pilon:407318..408181 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6532.t1	Gchil6532.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004390_pilon 407318..408181 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6532.t1 ID=Gchil6532.t1|Name=Gchil6532.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=288bp
MIPAHSIITQPGAARPAQAPLPSEPPQKKQRAAHLIPKLTVGDFSEASLQ
EAIKIGRRAKARGKPREGREAKVLGDLLRNMSVWARELAPQYSFSEFIFA
SQALGTNRSLRPMLANLRLAEFREVNAEFEGNPSLDQCAVAQPAGRDATQ
NESGIQVAAEAPPDGIDAIEWGNERDEWEEEEAMMDRMHMEVTEPKRDTS
SKTSEESIAVEVQSNVQAPSGLNEGHQRSDSKTSKQQGESDSRQQKEDIG
KTNTDGMSHGQPIKDAITRVESKAGHNRNNDIPMSPV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012923	Csm3