Gchil6525.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6525.t1
Unique NameGchil6525.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length574
Homology
BLAST of Gchil6525.t1 vs. uniprot
Match: A0A2V3J6C9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6C9_9FLOR)

HSP 1 Score: 471 bits (1211), Expect = 2.580e-156
Identity = 262/580 (45.17%), Postives = 361/580 (62.24%), Query Frame = 0
Query:    1 MSTSVTPHQAAASCDRLRVMACDVDPALVDLKPTVPHCINFMLTHANKLTVHKSAVLALIVLCEKHNMPQFLAQNGLIPVLIATLATFVNDLALVKNVVLLARSLLVEPSNRSTFCQHAGFAALSSAMTAFPDRESIQCSASALIATICYENQSRRLLACSNRIVPLLLQVLARFQHPNHWKLQSNVCMALRNLSLEPAACEHILAKTHRLHAIVTVIKPTTNASAVEEALGVCLNIATA-SASQSSPLLHTVCPILTRCVVEFLAATPRCFRRNSTCHELSFAVLRVCEPLERRRAEERQRTEHMRLAILYAAAYASNRSESSVNVVSSSCLLIRTMVIDPTNRRLFGQLHRGIPTLVRSIAFLVRSPIHLEHALLALGNAVFDSPAGKLKACEWGAFRVIANAMNINTKNAAVAEAALITIHGLCIESEKVGNLATSLMFHHLCTQSMRHFETSSRIQEEGLSALLSMGSGPQAKKQLHASDAMQVAERAAGLYPYSKNILALSTKLKRLAANETQNDDNHRAALCERGSSLDRNRDIETHTAQDKQQS------RDSLSVRIFGMMPSLQKLRSKPE 573
            M+T+ +   AAA C+ LR++ CD    +  L+ +  H +  M  HA  L V K A LALIVLCE+  M  ++ Q G +  L+    TF+ D ALVKNVVLL RSL++   NR  FC+H G   L+SAM  FP R S+QCSA+ALIA+ICYE++SRRLL  +N IVPLL+++L RFQ   + K+ SN CMALRN+SLE  ACE IL     L  + +++   +  SA EEA+GVCLNI T     + +  LH +   +   V++F++ T   FR +  CHEL+F +LRVC+ L     + + ++E +RL + YA  Y +N S  SV VVSS C+LIR MVID  +R+ FG++ + IPTLVR +AFL   P H+E +LLALGNAVFD+P GKL+ACE GA R+I   M  N   AAV+E+ L+ I  LCI+S+K+G +A+SL FH LC  +++ FE S  IQE GL+A++SMG G QA K +HAS+A+  A+RA  LYP S +I+AL  KL  +   E     +   AL ER  S+D +         +K Q       R+S   RI   +PS  + ++K E
Sbjct:   61 MTTAKSADDAAACCNSLRIIVCDFQTDVNGLQQSADHALKLMKAHATDLRVQKCATLALIVLCEQQRMAAYIGQIGAMQHLVEIGNTFLKDEALVKNVVLLMRSLVILEPNRINFCEHGGIGMLTSAMIEFPARASLQCSATALIASICYESESRRLLVTANGIVPLLIRILVRFQESGNGKVLSNACMALRNISLESIACEEILFHDSSLRNVCSIVVAESAPSAAEEAIGVCLNIVTVLECIKDTAELHKIVQTVLHAVIKFMSKTAMSFRTHVKCHELAFGLLRVCQSLPAENKDTKVKSEILRLTVTYAIEYTTNGSSRSVQVVSSVCILIRKMVIDACSRKTFGEIPQSIPTLVRCVAFLKNHPTHVEQSLLALGNAVFDAPVGKLRACESGALRIIGETMKANKNAAAVSESGLMAIQALCIDSDKMGTVASSLRFHDLCVLAIKTFEESPTIQERGLAAIISMGCGQQAMKNIHASEALDAADRAVSLYPCSNSIVALCAKLHAMVGTEKDVFKDQTRALRERSYSIDAHSRYTDQKEDEKSQDTGKKGGRESFPSRILSKLPSRHRPKNKSE 640          
The following BLAST results are available for this feature:
BLAST of Gchil6525.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6C9_9FLOR2.580e-15645.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 152..196
e-value: 0.01
score: 25.1
coord: 340..383
e-value: 190.0
score: 3.4
coord: 108..150
e-value: 260.0
score: 2.2
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 135..285
e-value: 2.5E-11
score: 44.7
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 286..524
e-value: 1.8E-9
score: 38.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..134
e-value: 1.1E-6
score: 29.4
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 323..432
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 323..432
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 39..217
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 39..217
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 28..486

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:393064..394785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6525.t1Gchil6525.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 393064..394785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6525.t1 ID=Gchil6525.t1|Name=Gchil6525.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=574bp
MSTSVTPHQAAASCDRLRVMACDVDPALVDLKPTVPHCINFMLTHANKLT
VHKSAVLALIVLCEKHNMPQFLAQNGLIPVLIATLATFVNDLALVKNVVL
LARSLLVEPSNRSTFCQHAGFAALSSAMTAFPDRESIQCSASALIATICY
ENQSRRLLACSNRIVPLLLQVLARFQHPNHWKLQSNVCMALRNLSLEPAA
CEHILAKTHRLHAIVTVIKPTTNASAVEEALGVCLNIATASASQSSPLLH
TVCPILTRCVVEFLAATPRCFRRNSTCHELSFAVLRVCEPLERRRAEERQ
RTEHMRLAILYAAAYASNRSESSVNVVSSSCLLIRTMVIDPTNRRLFGQL
HRGIPTLVRSIAFLVRSPIHLEHALLALGNAVFDSPAGKLKACEWGAFRV
IANAMNINTKNAAVAEAALITIHGLCIESEKVGNLATSLMFHHLCTQSMR
HFETSSRIQEEGLSALLSMGSGPQAKKQLHASDAMQVAERAAGLYPYSKN
ILALSTKLKRLAANETQNDDNHRAALCERGSSLDRNRDIETHTAQDKQQS
RDSLSVRIFGMMPSLQKLRSKPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold