Gchil6517.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6517.t1
Unique NameGchil6517.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length118
Homology
BLAST of Gchil6517.t1 vs. uniprot
Match: A0A2V3IYB6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB6_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 6.210e-38
Identity = 60/91 (65.93%), Postives = 73/91 (80.22%), Query Frame = 0
Query:   24 ARLNQKTNHHIWRRLRNARQHCSQVIRTCDVPHVARDTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAHTNMLRHLKRKTSQ 114
            ARLNQKTNH +WRRLR +RQ C+Q I+ CDVP  A D  NCVLRC+SS+CY LVYS  PLEEGE+D +RMR+FMKCAHT  L+ LK++ S+
Sbjct:   30 ARLNQKTNHQVWRRLRQSRQQCAQSIQICDVPQTADDIENCVLRCMSSQCYNLVYSQHPLEEGEVDDARMRTFMKCAHTEELKQLKQRRSE 120          
BLAST of Gchil6517.t1 vs. uniprot
Match: A0A7S1EQ06_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ06_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 2.210e-9
Identity = 32/78 (41.03%), Postives = 39/78 (50.00%), Query Frame = 0
Query:   29 KTNHHIWRRLRNARQHCSQVIRTCDVPHVARDTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAHTNMLR 106
            ++  H  R LRN R  C Q      V     +   CVL C+SSECY L+YS  PLE+GEID  R   F +C      R
Sbjct:   25 RSKGHFGRFLRNKRVKCGQRYECLKVEE--ENFEACVLDCISSECYELIYSKNPLEDGEIDDERWNKFQQCVRATNFR 100          
BLAST of Gchil6517.t1 vs. uniprot
Match: C1MNQ9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MNQ9_MICPC)

HSP 1 Score: 60.5 bits (145), Expect = 3.370e-9
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0
Query:   28 QKTNHHIWRRLRNARQHCSQVIRT----CDVPHVARDTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAHT 102
            +K N  I R +++ R  C   +R     C     A D  NC +RC+S ECY  VY   PLE+GE+D  R R+F  CA T
Sbjct:   37 KKRNQSIDREIKHRRARCDVEVREDASLCAPGASAIDMENCAMRCVSPECYENVYGDDPLEDGEVDVVRGRTFRSCART 115          
BLAST of Gchil6517.t1 vs. uniprot
Match: B4FXD2_MAIZE (Uncharacterized protein n=10 Tax=Panicoideae TaxID=147369 RepID=B4FXD2_MAIZE)

HSP 1 Score: 57.8 bits (138), Expect = 3.190e-8
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:   60 DTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAHTNML 105
            +  NCVLRCLS ECY L+Y   PLEEGE+D+ R + +  C H + L
Sbjct:   75 EKENCVLRCLSPECYDLIYGGDPLEEGELDYVRSQEYKYCMHKSSL 120          
BLAST of Gchil6517.t1 vs. uniprot
Match: I1H7Y2_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1H7Y2_BRADI)

HSP 1 Score: 57.8 bits (138), Expect = 3.190e-8
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   58 ARDTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAH 101
            A +  NCVLRCLS ECY L+Y   PLEEGE+D+ R   +  C H
Sbjct:   73 ATEKENCVLRCLSPECYNLIYGGDPLEEGELDYIRSHEYKYCMH 116          
BLAST of Gchil6517.t1 vs. uniprot
Match: B8AQW4_ORYSI (Uncharacterized protein n=7 Tax=Oryza TaxID=4527 RepID=B8AQW4_ORYSI)

HSP 1 Score: 57.8 bits (138), Expect = 3.250e-8
Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 0
Query:   58 ARDTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAHTNML 105
            A +  NCVLRCLS ECY L+Y   PLEEGE+D+ R   +  C H + L
Sbjct:   74 ATEKENCVLRCLSPECYDLIYGGDPLEEGELDYIRGHEYKYCMHKSSL 121          
BLAST of Gchil6517.t1 vs. uniprot
Match: A0A835EXV2_9POAL (Uncharacterized protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835EXV2_9POAL)

HSP 1 Score: 56.6 bits (135), Expect = 5.600e-8
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:   60 DTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAH 101
            +  NCVLRCLS ECY L+Y   PLEEGE+D+ R + +  C H
Sbjct:   70 EKENCVLRCLSPECYDLIYGGDPLEEGELDYVRSQEYKYCMH 111          
BLAST of Gchil6517.t1 vs. uniprot
Match: A0A1Z5SAM9_SORBI (Uncharacterized protein n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5SAM9_SORBI)

HSP 1 Score: 57.0 bits (136), Expect = 6.310e-8
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:   60 DTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAHTNML 105
            +  NCVLRCLS ECY L+Y   PLEEGE+D+ R + +  C H + L
Sbjct:   75 EKENCVLRCLSPECYDLIYGGDPLEEGELDYVRGQEYKYCMHKSSL 120          
BLAST of Gchil6517.t1 vs. uniprot
Match: A0A1D6JTM7_MAIZE (Uncharacterized protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6JTM7_MAIZE)

HSP 1 Score: 56.6 bits (135), Expect = 8.020e-8
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:   60 DTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAH 101
            +  NCVLRCLS ECY L+Y   PLEEGE+D+ R + +  C H
Sbjct:   75 EKENCVLRCLSPECYDLIYGGDPLEEGELDYVRSQEYKYCMH 116          
BLAST of Gchil6517.t1 vs. uniprot
Match: A0A3L6SDN8_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SDN8_PANMI)

HSP 1 Score: 57.0 bits (136), Expect = 8.530e-8
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0
Query:   60 DTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCAHTNM 104
            +  NCVLRCLS ECY L+Y   PLEEGE+D+ R + +  C H  M
Sbjct:   74 EKENCVLRCLSPECYDLIYGGDPLEEGELDYVRSQEYKYCMHKLM 118          
The following BLAST results are available for this feature:
BLAST of Gchil6517.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYB6_9FLOR6.210e-3865.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1EQ06_9RHOD2.210e-941.03Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
C1MNQ9_MICPC3.370e-940.51Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
B4FXD2_MAIZE3.190e-852.17Uncharacterized protein n=10 Tax=Panicoideae TaxID... [more]
I1H7Y2_BRADI3.190e-854.55Uncharacterized protein n=1 Tax=Brachypodium dista... [more]
B8AQW4_ORYSI3.250e-852.08Uncharacterized protein n=7 Tax=Oryza TaxID=4527 R... [more]
A0A835EXV2_9POAL5.600e-854.76Uncharacterized protein n=2 Tax=Digitaria exilis T... [more]
A0A1Z5SAM9_SORBI6.310e-852.17Uncharacterized protein n=2 Tax=Sorghum bicolor Ta... [more]
A0A1D6JTM7_MAIZE8.020e-854.76Uncharacterized protein n=1 Tax=Zea mays TaxID=457... [more]
A0A3L6SDN8_PANMI8.530e-853.33Uncharacterized protein n=1 Tax=Panicum miliaceum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031985Protein of unknown function DUF4787PFAMPF16029DUF4787coord: 37..99
e-value: 9.1E-18
score: 64.2
IPR031985Protein of unknown function DUF4787PANTHERPTHR35455UNNAMED PRODUCTcoord: 46..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..117
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..19
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:335483..335915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6517.t1Gchil6517.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 335483..335915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6517.t1 ID=Gchil6517.t1|Name=Gchil6517.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=118bp
MVCARACALVRLSAFAALIGSVLARLNQKTNHHIWRRLRNARQHCSQVIR
TCDVPHVARDTHNCVLRCLSSECYTLVYSHQPLEEGEIDHSRMRSFMKCA
HTNMLRHLKRKTSQPHS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031985DUF4787