Gchil6490.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6490.t1
Unique NameGchil6490.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length218
Homology
BLAST of Gchil6490.t1 vs. uniprot
Match: A0A2V3IMG8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG8_9FLOR)

HSP 1 Score: 199 bits (507), Expect = 2.780e-61
Identity = 106/199 (53.27%), Postives = 133/199 (66.83%), Query Frame = 0
Query:   14 RKIDDSLSFPVLRLHQHSSSFQALPPAHXXXXXSASSAHLSAPRSYWDTVLSRGPAPEAAQQPSTP--DLRSPPNPVSLDASIKDRGSGVTSSIFRKRSGSLGLVAEPIPDTRRSHASRPFACHLCKGRFERIGHLNAHIDAVHNSRKPYKCQYENCGKCFSHKSSLYRHVRGIHEKKGHKLPSASSPPPRPTPAPFRS 210
            R++D SLSFPVLRL Q S       P H        S +   PR+YW+TVLS+    E+A  P     +  S   PV+ +     +  G++SS+ RKRS  LGL+ +P+PDTRRS ASRPF CHLCKGRFERIGHLNAH+DAVHN+R+PYKC YE+CGK FSHKSSLYRHVRGIHE++  +  SA+     P+  PF+S
Sbjct:   19 RQMDSSLSFPVLRL-QGSPRHLNSGPQHSPSPSLQDSTN---PRTYWNTVLSQSSPSESASAPRXXXSEAGSSTQPVNFELDPNFKAYGMSSSLNRKRSNCLGLMIDPVPDTRRSTASRPFGCHLCKGRFERIGHLNAHVDAVHNARQPYKCHYEHCGKAFSHKSSLYRHVRGIHERRAQEQASAT-----PSTLPFKS 208          
BLAST of Gchil6490.t1 vs. uniprot
Match: A0A1Y1Z1D5_9FUNG (Uncharacterized protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1Z1D5_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 1.080e-9
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  123 TRRSHASRPFACHLCKGRFERIGHLNAHIDAVHNSRKPYKCQYENCGKCFSHKSSLYRHVRGIHEKKGHK 192
            T+  + S+PF C  C   F R+ HLN HI   H   +P+KC+ E CG+CFS + +L RH++ +H+K   K
Sbjct:   21 TKTQYVSKPFKCMTCLRSFRRMEHLNRHI-LTHTGERPFKCEVEGCGRCFSRQDTLLRHLK-VHDKSRDK 88          
BLAST of Gchil6490.t1 vs. uniprot
Match: A0A1Y1V654_9FUNG (Uncharacterized protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V654_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 1.930e-9
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0
Query:  115 LVAEPIPDTRRSHASRPFACHLCKGRFERIGHLNAHIDAVHNSRKPYKCQYENCGKCFSHKSSLYRHVRGIHEKKGHK 192
            L+ +    ++  + S+PF C  C   F R+ HLN HI   H   +P+KC+ E CG+CFS + +L RH++ IH K   K
Sbjct:   13 LMFQQNESSKTQYVSKPFKCMTCLRSFRRMEHLNRHI-LTHTGERPFKCEVEGCGRCFSRQDTLLRHLK-IHNKPNDK 88          
BLAST of Gchil6490.t1 vs. uniprot
Match: A0A1Y1XEJ9_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XEJ9_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 1.970e-9
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query:  123 TRRSHASRPFACHLCKGRFERIGHLNAHIDAVHNSRKPYKCQYENCGKCFSHKSSLYRHVRGIHEKKGHK 192
            T+  + S+PF C  C   F R+ HLN HI   H   +P+KC+ E CG+CFS + +L RH++ +H K   K
Sbjct:   21 TKTQYVSKPFKCMTCLRSFRRMEHLNRHI-LTHTGERPFKCEIEGCGRCFSRQDTLLRHLK-VHNKSRDK 88          
BLAST of Gchil6490.t1 vs. uniprot
Match: A7TNZ7_VANPO (Uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) TaxID=436907 RepID=A7TNZ7_VANPO)

HSP 1 Score: 57.4 bits (137), Expect = 3.970e-6
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0
Query:  126 SHASRPFACHLCKGRFERIGHLNAHIDAVHNSRKPYKCQYENCGKCFSHKSSLYRHVRGIHEKK 189
            S+    + C +C  R  R   L+AH+  +H   +PYKC +ENCGK F+ KS+L RHV+ IH KK
Sbjct:  418 SNKKATYECSVCGKRVTRAYSLHAHM-LIHTKVRPYKCDWENCGKTFNVKSNLNRHVK-IHLKK 479          
The following BLAST results are available for this feature:
BLAST of Gchil6490.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IMG8_9FLOR2.780e-6153.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1Y1Z1D5_9FUNG1.080e-941.43Uncharacterized protein n=1 Tax=Neocallimastix cal... [more]
A0A1Y1V654_9FUNG1.930e-938.46Uncharacterized protein n=1 Tax=Piromyces finnis T... [more]
A0A1Y1XEJ9_9FUNG1.970e-941.43Uncharacterized protein (Fragment) n=1 Tax=Anaerom... [more]
A7TNZ7_VANPO3.970e-645.31Uncharacterized protein n=1 Tax=Vanderwaltozyma po... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 161..186
e-value: 6.0E-4
score: 29.1
coord: 132..155
e-value: 0.41
score: 19.7
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 161..186
e-value: 3.5E-4
score: 20.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 163..186
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 134..155
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 161..191
score: 13.110296
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 132..160
score: 11.385298
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 126..162
e-value: 9.7E-6
score: 27.5
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 163..186
e-value: 1.6E-9
score: 39.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..94
NoneNo IPR availablePANTHERPTHR46179:SF13ZINC FINGER PROTEIN 423 HOMOLOGcoord: 125..194
NoneNo IPR availablePANTHERPTHR46179ZINC FINGER PROTEINcoord: 125..194
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 130..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:82620..83363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6490.t1Gchil6490.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 82620..83363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6490.t1 ID=Gchil6490.t1|Name=Gchil6490.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=218bp
MSFGRGGPSRSNRRKIDDSLSFPVLRLHQHSSSFQALPPAHHHASSSASS
AHLSAPRSYWDTVLSRGPAPEAAQQPSTPDLRSPPNPVSLDASIKDRGSG
VTSSIFRKRSGSLGLVAEPIPDTRRSHASRPFACHLCKGRFERIGHLNAH
IDAVHNSRKPYKCQYENCGKCFSHKSSLYRHVRGIHEKKGHKLPSASSPP
PRPTPAPFRSMNLSKHR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf