Gchil646.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil646.t1
Unique Name	Gchil646.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	144

Homology

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BLAST of Gchil646.t1 vs. uniprot
Match: A0A2V3IDE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDE0_9FLOR)

HSP 1 Score: 142 bits (357), Expect = 9.520e-41
Identity = 77/143 (53.85%), Postives = 107/143 (74.83%), Query Frame = 0

Query:    1 MRVTSQVLRATQTMTSPESSRILAEAAKRVSQRQRSRSRGLRKYSDLIVVGLATAVAATAVKNKRTYTDNRERMELKIEQLEEERDLAVRENDLAQETLLQNVREGVQAARSGGEQGLQVWIRSVLKDTQKPNTENLDKPRVV 143
            MR T Q+ RATQT+ S E+SR++AEAAKR SQRQ+ +SRGLRKY DL+V GLAT VA TAVKNK  + ++RE+ME++I+QLEEERD  ++  D +Q+ L+ +V  GV AAR  GE+GL++W+ +VLK+   P      KP+++
Sbjct:    1 MRGTQQLFRATQTLASTEASRLVAEAAKRASQRQK-KSRGLRKYGDLVVAGLATLVAGTAVKNKYKFEEDREKMEMRIQQLEEERDEVLKRADASQQRLMDDVNVGVIAARRKGEEGLRIWLGTVLKEVSSPEEIEKAKPKLI 142

The following BLAST results are available for this feature:

BLAST of Gchil646.t1 vs. uniprot

BLAST of Gchil646.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IDE0_9FLOR	9.520e-41	53.85	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..98
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..61
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 62..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004380_pilon	contig	tig00004380_pilon:736127..736558 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil646.t1	Gchil646.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004380_pilon 736127..736558 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil646.t1 ID=Gchil646.t1|Name=Gchil646.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=144bp
MRVTSQVLRATQTMTSPESSRILAEAAKRVSQRQRSRSRGLRKYSDLIVV
GLATAVAATAVKNKRTYTDNRERMELKIEQLEEERDLAVRENDLAQETLL
QNVREGVQAARSGGEQGLQVWIRSVLKDTQKPNTENLDKPRVV*