Gchil6405.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6405.t1
Unique NameGchil6405.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length188
Homology
BLAST of Gchil6405.t1 vs. uniprot
Match: A0A2V3IR91_9FLOR (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR91_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 7.870e-59
Identity = 87/124 (70.16%), Postives = 99/124 (79.84%), Query Frame = 0
Query:   61 LPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLLRKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSF 184
            LPKTE++WR+ LT  QF VLR+ GTE PF+S LN EK  GTFCC+ C A +F S AKF SGTGWPSF+  + + +R KQS+ DR LLRKEVSC RCGGHLGHVFEDGP PTGLRYCINGVALSF
Sbjct:   19 LPKTEEEWRQRLTAAQFRVLRQQGTEPPFTSALNDEKRVGTFCCSGCTAPLFPSVAKFNSGTGWPSFTYPLPQRVRAKQSLSDRLLLRKEVSCVRCGGHLGHVFEDGPPPTGLRYCINGVALSF 142          
BLAST of Gchil6405.t1 vs. uniprot
Match: A0A7T2LLE6_9SPHN (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Sphingosinicella flava TaxID=2771430 RepID=A0A7T2LLE6_9SPHN)

HSP 1 Score: 179 bits (453), Expect = 2.350e-54
Identity = 87/149 (58.39%), Postives = 106/149 (71.14%), Query Frame = 0
Query:   41 ALPLLTTLALAPIAHADPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLL--RKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            A+  L   A AP   A   ++ +TEQ+WR  L P++F VLR+ GTERP SSPLN EK RGTF CA CG  +F+SAAKF+SGTGWPSF  A+   +  K    DR +L  R EV C+RCGGHLGHVF DGP+PTGLRYC+NG+AL+F PA
Sbjct:   16 AISALALFARAPAKAAARFEVVRTEQEWRRRLGPQRFAVLRQAGTERPGSSPLNREKRRGTFACAGCGLPLFSSAAKFDSGTGWPSFYRALTNAVVTKS---DRSMLAPRTEVLCRRCGGHLGHVFNDGPKPTGLRYCMNGLALNFRPA 161          
BLAST of Gchil6405.t1 vs. uniprot
Match: A0A1E3W9Z9_9HYPH (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Methyloceanibacter marginalis TaxID=1774971 RepID=A0A1E3W9Z9_9HYPH)

HSP 1 Score: 176 bits (447), Expect = 2.240e-53
Identity = 82/137 (59.85%), Postives = 100/137 (72.99%), Query Frame = 0
Query:   51 APIAHADPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLLRKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            A  A     ++ KT ++WRE LTP+Q+ VLRE  TERP++SPLN EK +GTF CAAC   +F+S  KFESGTGWPSF + IE  +  K+     F LR+EV C+RCGGHLGHVF DGP+PTGLRYCINGV+L F PA
Sbjct:   32 ATAATEGHFEVTKTPEEWREILTPQQYAVLREEDTERPWTSPLNKEKRKGTFACAACDLPLFSSKTKFESGTGWPSFYAPIEGAVGTKEDWS--FGLREEVHCRRCGGHLGHVFNDGPKPTGLRYCINGVSLKFIPA 166          
BLAST of Gchil6405.t1 vs. uniprot
Match: K9V6M8_9CYAN (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Calothrix sp. PCC 6303 TaxID=1170562 RepID=K9V6M8_9CYAN)

HSP 1 Score: 175 bits (443), Expect = 3.390e-53
Identity = 82/130 (63.08%), Postives = 96/130 (73.85%), Query Frame = 0
Query:   57 DPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDR--FLLRKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSF 184
            +  ++ KT+Q+W+E+LTPEQF VLR+HGTERP +SPLN E   GT+ CAACG  VF S  KF+SGTGWPSF   IEEGI    +  DR  F+ R EV CK CGGHLGHVF DGP PTG RYCINGV+L F
Sbjct:    6 NEFKIQKTDQEWKESLTPEQFQVLRKHGTERPHTSPLNKEYGEGTYVCAACGTPVFTSTTKFDSGTGWPSFYQPIEEGI---DTTVDRSFFMTRVEVHCKNCGGHLGHVFNDGPAPTGKRYCINGVSLKF 132          
BLAST of Gchil6405.t1 vs. uniprot
Match: A0A2D8RSU8_9HYPH (Peptide-methionine (R)-S-oxide reductase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D8RSU8_9HYPH)

HSP 1 Score: 175 bits (443), Expect = 9.070e-53
Identity = 83/150 (55.33%), Postives = 105/150 (70.00%), Query Frame = 0
Query:   40 AALPLLTTLALAPIAHADPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDR--FLLRKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            AA+ +      A  A     ++ KTE +W+E LTPEQF+VLRE GTERP SSPLN EK  GTF CA C   +F S  K+ESGTGWPSF + +++ IR  +   DR  F+ R EV C+RCGGHLGHVF+DGP+PTG RYC+NGVA++F P+
Sbjct:   17 AAMGIALRDGKAEAAGGSAFEVIKTEAEWKELLTPEQFYVLREEGTERPGSSPLNKEKRAGTFHCAGCNLALFPSRTKYESGTGWPSFYAPLDDAIRTSE---DRTFFMTRTEVHCRRCGGHLGHVFDDGPKPTGKRYCMNGVAMTFEPS 163          
BLAST of Gchil6405.t1 vs. uniprot
Match: UPI000B4A7DA5 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4A7DA5)

HSP 1 Score: 174 bits (442), Expect = 1.600e-52
Identity = 78/162 (48.15%), Postives = 110/162 (67.90%), Query Frame = 0
Query:   37 TRRAALPLLTTLALAPIAH-----------ADPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLLRKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            TRR  L  L  L+++ +A             +  ++ KT ++WR+ LTP+QF+VLRE GTE PF+SPLNAEK  G + CAAC   +F+S  K++SGTGWPSF   +++ +R ++      L++ EV C+RCGGHLGHVF DGP+PTGLRYC+NG A++F P+
Sbjct:    3 TRRTVLSGLAALSVSALAFWGFGGAMAVSSEESFEITKTPEEWRKALTPKQFYVLRERGTEHPFTSPLNAEKRAGIYDCAACDLPLFSSETKYDSGTGWPSFWKPLDDAVRTREDRAFLLLVQTEVHCRRCGGHLGHVFNDGPKPTGLRYCMNGEAMTFLPS 164          
BLAST of Gchil6405.t1 vs. uniprot
Match: A0A6N0DZ55_9HYPH (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Methyloligella sp. GL2 TaxID=2742204 RepID=A0A6N0DZ55_9HYPH)

HSP 1 Score: 173 bits (439), Expect = 3.230e-52
Identity = 78/140 (55.71%), Postives = 101/140 (72.14%), Query Frame = 0
Query:   48 LALAPIAHADPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLLRKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            L  A +A     ++  ++++W+E LTP Q++VLRE GTERPF+SPLN EK +GTF CA C   +F+S  KF+SGTGWPSF + I+  +     +    ++R+EV C RCGGHLGHVFEDGP+PTGLRYCINGVAL F PA
Sbjct:   24 LPRASLAKTKEFEVTHSKEEWKELLTPTQYYVLREEGTERPFTSPLNDEKRKGTFACAGCDLPLFSSDTKFDSGTGWPSFWAPIKGAVEQNTDM-SLGMVRQEVHCSRCGGHLGHVFEDGPKPTGLRYCINGVALKFIPA 162          
BLAST of Gchil6405.t1 vs. uniprot
Match: UPI00111F0230 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Sphingomonas japonica TaxID=511662 RepID=UPI00111F0230)

HSP 1 Score: 173 bits (438), Expect = 3.790e-52
Identity = 89/161 (55.28%), Postives = 107/161 (66.46%), Query Frame = 0
Query:   35 RFTRRAALPLLTTLALAPIAHADP------IQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLL--RKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            R TRR    LL      PIA A P       +L  +E +WR+ LTP+QF+VLRE GTERP+SSPLN EK  G F CA C   +F S+ KFESGTGWPSF       + +K   PDR +L  R EV C+RCGGHLGHVF+DGP+PTG RYC+NGVA++F PA
Sbjct:    2 RTTRRH---LLAAAGFTPIALAMPHVASAQARLSLSEAEWRKRLTPQQFYVLREEGTERPYSSPLNKEKRAGIFSCAGCTLPLFLSSTKFESGTGWPSFYDVRANAVTLK---PDRSMLFERTEVECRRCGGHLGHVFDDGPKPTGKRYCMNGVAMTFTPA 156          
BLAST of Gchil6405.t1 vs. uniprot
Match: UPI001C686DF6 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C686DF6)

HSP 1 Score: 172 bits (436), Expect = 6.110e-52
Identity = 84/126 (66.67%), Postives = 94/126 (74.60%), Query Frame = 0
Query:   63 KTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLL-RKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            K+E +WR  LTPEQF VLR+HGTER  SSPLNAEK RGTF CA CG  +F+S AKFESGTGWPSF   +E  +    S+  R L+ R EV C RCGGHLGHVF DGP PTGLRYC+NGVAL F PA
Sbjct:   24 KSEAEWRAQLTPEQFRVLRQHGTERAGSSPLNAEKRRGTFVCAGCGNALFDSGAKFESGTGWPSFWQPLEGAVGT--SVDRRLLMTRTEVHCARCGGHLGHVFPDGPPPTGLRYCMNGVALRFEPA 147          
BLAST of Gchil6405.t1 vs. uniprot
Match: UPI0010BF9039 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Roseomonas sp. HF4 TaxID=2562313 RepID=UPI0010BF9039)

HSP 1 Score: 171 bits (434), Expect = 9.840e-52
Identity = 88/154 (57.14%), Postives = 105/154 (68.18%), Query Frame = 0
Query:   36 FTRRAALPLLTTLALAPIAHADPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRGTFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDR--FLLRKEVSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA 187
            FT+R A P  T     P+A        KT+ +WR  L+PE F VLR+HGTERP +SPLNAEK  GTF CA CG  +F++AAKFESGTGWPSF + +E  +  +    DR  F+ R EV C RCGGHLGHVF DGP PTGLRYC+NGV+L F PA
Sbjct:    2 FTKRQAEPEETF----PVA--------KTDAEWRAALSPEAFRVLRQHGTERPGTSPLNAEKRPGTFTCAGCGQPLFDAAAKFESGTGWPSFFAPVEGAVGTRS---DRSFFMTRTEVHCARCGGHLGHVFPDGPAPTGLRYCMNGVSLGFDPA 140          
The following BLAST results are available for this feature:
BLAST of Gchil6405.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR91_9FLOR7.870e-5970.16Peptide-methionine (R)-S-oxide reductase n=1 Tax=G... [more]
A0A7T2LLE6_9SPHN2.350e-5458.39Peptide-methionine (R)-S-oxide reductase n=1 Tax=S... [more]
A0A1E3W9Z9_9HYPH2.240e-5359.85Peptide-methionine (R)-S-oxide reductase n=1 Tax=M... [more]
K9V6M8_9CYAN3.390e-5363.08Peptide-methionine (R)-S-oxide reductase n=1 Tax=C... [more]
A0A2D8RSU8_9HYPH9.070e-5355.33Peptide-methionine (R)-S-oxide reductase n=2 Tax=H... [more]
UPI000B4A7DA51.600e-5248.15peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
A0A6N0DZ55_9HYPH3.230e-5255.71Peptide-methionine (R)-S-oxide reductase n=1 Tax=M... [more]
UPI00111F02303.790e-5255.28peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
UPI001C686DF66.110e-5266.67peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
UPI0010BF90399.840e-5257.14peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002579Peptide methionine sulphoxide reductase MrsB domainPFAMPF01641SelRcoord: 67..185
e-value: 3.6E-44
score: 149.6
IPR002579Peptide methionine sulphoxide reductase MrsB domainTIGRFAMTIGR00357TIGR00357coord: 63..186
e-value: 4.8E-44
score: 147.6
IPR002579Peptide methionine sulphoxide reductase MrsB domainPROSITEPS51790MSRBcoord: 65..187
score: 56.320419
NoneNo IPR availableGENE3D2.170.150.20Peptide methionine sulfoxide reductase.coord: 52..187
e-value: 5.9E-52
score: 177.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..35
NoneNo IPR availablePANTHERPTHR43234SLL1680 PROTEINcoord: 58..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 52..56
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..56
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 40..51
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 63..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:710877..711440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6405.t1Gchil6405.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 710877..711440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6405.t1 ID=Gchil6405.t1|Name=Gchil6405.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=188bp
MYRVAFSLPPHGRARLTAEPPHPSSKRPATAPPPRFTRRAALPLLTTLAL
APIAHADPIQLPKTEQQWRETLTPEQFFVLREHGTERPFSSPLNAEKTRG
TFCCAACGARVFNSAAKFESGTGWPSFSSAIEEGIRVKQSIPDRFLLRKE
VSCKRCGGHLGHVFEDGPRPTGLRYCINGVALSFFPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB_dom
IPR011057Mss4-like_sf