Gchil6394.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6394.t1
Unique NameGchil6394.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length270
Homology
BLAST of Gchil6394.t1 vs. uniprot
Match: A0A2V3IY52_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY52_9FLOR)

HSP 1 Score: 341 bits (874), Expect = 7.200e-114
Identity = 180/269 (66.91%), Postives = 213/269 (79.18%), Query Frame = 0
Query:    1 MLTDSEFQTLRDELEHLGTNQLRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTRLLKAGIVQRPVKSADVRHARNQHDEECDEEGDELHMLNGATENCNDARRIDVDTRMDEKLKWLIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMSISVSAAGRFRLGILSYLVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECPICEAPISCLFTGAARNRDERMCSMCGCTIGFNRRWSKIYLVSQPSNNKYEAPD 269
            MLTDSEFQTLRDE+++LG NQLRL  MEK+WVQATS+RDFDRRVREEF++SEE+LR+LK  LL          +AD + A   +          L   +  T  C DA RID D  ++E+LKWLIFTDA EER KI+LLYLPAVLMSFVTASV TILFALLDGEM+I+VS AGRFRLGILSYLVV++T++ SNQVTP MLDYLDLGQP+LLRGECP C+AP+SCLFTGA R RDER+C +CGCT+GFNRRWSK+YLVSQP+   ++ PD
Sbjct:  116 MLTDSEFQTLRDEVQYLGKNQLRLHDMEKIWVQATSARDFDRRVREEFQVSEEQLRSLKQNLLNTDGGGAHGGAADDKSANGVN---------LLGASSSDTREC-DAERIDADAHVEERLKWLIFTDANEERLKILLLYLPAVLMSFVTASVLTILFALLDGEMTITVSTAGRFRLGILSYLVVMLTIYISNQVTPFMLDYLDLGQPTLLRGECPSCKAPVSCLFTGAVRVRDERVCGVCGCTVGFNRRWSKLYLVSQPATQDFQQPD 374          
BLAST of Gchil6394.t1 vs. uniprot
Match: A0A7S1TAJ9_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAJ9_9RHOD)

HSP 1 Score: 193 bits (491), Expect = 7.440e-57
Identity = 103/270 (38.15%), Postives = 154/270 (57.04%), Query Frame = 0
Query:    1 MLTDSEFQTLRDELEHLGTNQLRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTRLLKAGIVQRPVKSADVRHARNQHDEECDEEGDELHMLNGATENCNDARRIDVDTRMDEKLKWLIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMSISVSAAGRFRLGILSYLVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECPICEAPISCLFTGA-ARNRDERMCSMCGCTIGFNRRWSKIYLVSQPSNNKYEAPD 269
            + T  EF+ LRDE+  LG   +RL  ME+ WV A   ++FDR  + EF +++EELR +K                              E  +++H  +    + NDA +   D+    +L++L+F DA +ER KI L+Y PA + S +  S+ ++LF L DGE+ ++++  GR RLG+ S +V  +T+WF+N VTPV+LDYLDLG+P L++G CP C    SCLFT + +R R ER C  C   + FNR+W+KIY+V  P +     PD
Sbjct:   74 LYTQEEFRALRDEMSFLGAESVRLGAMERAWVVAAQQQEFDRTFKNEFNLTDEELRRIK------------------------------EAVEKVHRQSRTRTSGNDAEQYSADSDPGPRLQYLLFGDAVQERLKIFLIYAPAAISSVLACSIISVLFLLFDGEVVLNITTVGRLRLGLASAVVATLTIWFTNTVTPVLLDYLDLGRPILMKGNCPNCSETTSCLFTSSTSRVRAERRCRNCKSVLAFNRKWNKIYIVEHPRSRPLRRPD 313          
BLAST of Gchil6394.t1 vs. uniprot
Match: M2XEH7_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XEH7_GALSU)

HSP 1 Score: 194 bits (493), Expect = 1.880e-56
Identity = 112/270 (41.48%), Postives = 162/270 (60.00%), Query Frame = 0
Query:    1 MLTDSEFQTLRDELEHLGTNQLRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTRLLKAGIVQRPVKSADVRHARNQHDEECDEEGDELHMLNGATENCNDARRIDVDTRMDEKLKWLIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMSISVSAAGRFRLGILSYLVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECPICEAPISCLFTGA-ARNRDERMCSMCGCTIGFNRRWSKIYLVSQPSNNKYEAPD 269
            M ++ EF TLRDEL+HLG+   RL  +E +WVQA+  RDFDR  + EFE+S+ E+++LK +LL+     RP  + D+  A  +  ++         ++  A      A        +D  L++L+F DAT +RFK+++LY PA L++ + +S   I F L DGE+ + +SA GR R  +L  ++V    WF+N VTP +L YLDLG P LL+G CP C + +SCLFT +  R RDER+CS C   +GFN RW K+YLV   S+     PD
Sbjct:  120 MFSEEEFHTLRDELDHLGSTSTRLHNLEVMWVQASQQRDFDRNFQNEFELSQSEMKSLKEKLLEERKA-RPPLAEDLALATKRKIQQ-------RSLVRRAARESEAA--------LDNSLRYLLFGDATLDRFKLLVLYAPAALLAGIMSSFMAISFFLFDGEVEVRISAIGRLRFFLLLAVIVYGVGWFTNFVTPRILRYLDLGHPLLLKGHCPQCGSMVSCLFTSSETRIRDERVCSKCNALVGFNHRWRKVYLVRPSSSQTKMEPD 373          
BLAST of Gchil6394.t1 vs. uniprot
Match: M1VHK8_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VHK8_CYAM1)

HSP 1 Score: 177 bits (449), Expect = 2.920e-50
Identity = 107/273 (39.19%), Postives = 152/273 (55.68%), Query Frame = 0
Query:    1 MLTDSEFQTLRDELEHLGTNQLRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTRLLKAGIVQRPVKSADVRHARNQHDEECDEEGDELHMLNGA--TENCNDARRIDVDTRMDEKLKWLIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMSISVSAAGRFRLGILSYLVVLMTVWFSNQVTPVMLDYLDLGQPSLLRGECPICEAPISCLFTGAA-RNRDERMCSMCGCTIGFNRRWSKIYLVSQPSNNK-YEAPD 269
            +LTD EF+TLRDELEHLG++ LRL+ +EKVW+QA   RD DRR+  E  +S EEL  LK +L                                     GA  T   +    +  D+ MD++L +L+F DA E+RFK++LLY PAVL+   +   F +L  +  G + ++       R  +L  ++ ++T WFSN +TP ML YLDLG P ++RG CP C   ++CLF+ A+ R RDER C  CG  +GFN    K++LV++P + K   APD
Sbjct:  105 VLTDGEFKTLRDELEHLGSSSLRLNDLEKVWIQAAQQRDMDRRLLNELRLSPEELDGLKAKL-------------------------------------GASRTSTLDMQSILKSDSSMDKRLMYLLFGDAVEDRFKLLLLYAPAVLLCLSSILGFALLDLICLGHIQLTFDDQVAVRASVLFVVIAVVTAWFSNYLTPRMLSYLDLGSPEVVRGPCPNCGNDVTCLFSSASDRKRDERRCKRCGAIVGFNVAQRKVFLVARPQDRKKLSAPD 340          
BLAST of Gchil6394.t1 vs. uniprot
Match: A0A7J7IJE8_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJE8_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 2.090e-22
Identity = 70/193 (36.27%), Postives = 103/193 (53.37%), Query Frame = 0
Query:    1 MLTDSEFQTLRDELEHLGTNQLRLDRMEKVWVQATSSRDFDRRVREEFEISEEELRALKTRLLKAGIVQRPVKSADVRHARNQHDEECDEEGDELHMLNGATENCNDARRIDVDTRMDEKLKWLIFTDATEERFKIMLLYLPAVLMSFVTASVFTILFALLDGEMSISVSAAGRFRLGILSYLVVLMTVWFSN 193
            +LT+ EF+TLRDELEHLG++ +RL+ +EKVW+QA   RD DRR++ E  +S EEL  LK +L   G  +    S D++                                   D+ MD++L +L+F DA E+RFKI+LLY PAVL+   +   F +L  +  G + +S       R  +L  ++ L+T WFSN
Sbjct:   98 VLTEGEFRTLRDELEHLGSSSIRLNDLEKVWIQAAQQRDLDRRLQNELRLSPEELDGLKAKL---GASR--TSSLDLQSILKS------------------------------DSSMDKRLLYLLFGDAVEDRFKILLLYAPAVLLCLSSIIGFALLDLICLGHVQLSFDDQFSVRAPVLFVIITLVTAWFSN 255          
The following BLAST results are available for this feature:
BLAST of Gchil6394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IY52_9FLOR7.200e-11466.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TAJ9_9RHOD7.440e-5738.15Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
M2XEH7_GALSU1.880e-5641.48Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
M1VHK8_CYAM12.920e-5039.19Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7J7IJE8_9RHOD2.090e-2236.27Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..161
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..269
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..191
NoneNo IPR availableTMHMMTMhelixcoord: 175..192
NoneNo IPR availableTMHMMTMhelixcoord: 138..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:625407..626294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6394.t1Gchil6394.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 625407..626294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6394.t1 ID=Gchil6394.t1|Name=Gchil6394.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=270bp
MLTDSEFQTLRDELEHLGTNQLRLDRMEKVWVQATSSRDFDRRVREEFEI
SEEELRALKTRLLKAGIVQRPVKSADVRHARNQHDEECDEEGDELHMLNG
ATENCNDARRIDVDTRMDEKLKWLIFTDATEERFKIMLLYLPAVLMSFVT
ASVFTILFALLDGEMSISVSAAGRFRLGILSYLVVLMTVWFSNQVTPVML
DYLDLGQPSLLRGECPICEAPISCLFTGAARNRDERMCSMCGCTIGFNRR
WSKIYLVSQPSNNKYEAPD*
back to top