Gchil6383.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6383.t1
Unique NameGchil6383.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length613
Homology
BLAST of Gchil6383.t1 vs. uniprot
Match: A0A2V3IU02_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU02_9FLOR)

HSP 1 Score: 859 bits (2219), Expect = 2.020e-309
Identity = 426/600 (71.00%), Postives = 478/600 (79.67%), Query Frame = 0
Query:   23 KAKREQVLPSLTKPLSLPSPGKTVWPAPPPSTPVGNWVLHQHSFAPKRQYFMSYCAGLARRRITDHLMWFQFPGVSDPHTQRVGVHYSRLAWVGGPLAELVSSPAEKKVPARGGDN----------DVDMGAGKGAGDFGDGEDGGAGGEQDGVGETTGNTQGQDQHVTDADAGSTGGNPGGAEKQVSVDEDPDHPYRRPDAYDLSEHDTPRTFAIVVKFLYCEEIRFNYLTFDELVALATTAHRWNLTDLYNATFAYVMDQDLLAGGLGIRTFLPLVAHEETPEPFRRYFCIAVGHHFDVLYPRLRAVKEANPSNTPALWKTVFKQKMMSHILHCITLYSHGLYDEYLLDVIMRYYEQQGDASDDEMLGLLSQLSWDDIDVGGVFSSEGMSKKWSSRAVRLAALASYAPQTAALEVRIPWNIPLQRLLKQQVWSFQTEHVPCGPYVCYLHVRKGNGREVSLFVHIWDRENKPLKEDARHEIVRVKCRATEANCMCDSSKQWSDCSHGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWRLAHGPDCGLAITTVLQFVKPKVPFEGPARRSRVRAMSPGRPQTPIQKKRSGSRMKLRESR 612
            KAKRE +L + TKP +LPSP KTVWPAPPPSTPVGNW+LHQHSFAPKR YF +YCAGLARRR+ DHLMWF+FP   D   QR+ VHYSRLAWVGGPLAELV+SP E+   A   D+          D DM                         +   +T GQ   V   D           +K V+ DEDPDHPYRRPD +DL+E DTPRTFAIV+KFLYCEEI+ NYLTFDELV+LA TAHRW+LTDLY+ATF+YVMDQDLL+GGLGIRTFLPL AHEETPE FRRY CIAVGHHFDVLYPRLRA+K+ANP  TP LW+TVF+QKM+SH+LH I+LYS  +Y++YLLDV++RYYE   D +DD++LGLLSQLSWDD+DV   F ++G SK WS+RAVRLAALA+YAPQT ALEVRIPWNIPLQRLLKQ VWSFQTEHVPCGPY+CYLHVRKG GREVSLFVHIW+RENKPL+++ARHE+VRVKCRATE NC CDSSKQWSD  HGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWR AHG  CGLAITTVLQFV PK  FEGPA+RSR    SPGR Q+PIQKKRSGSRMKLRESR
Sbjct:   14 KAKRELLLSTPTKPSTLPSPKKTVWPAPPPSTPVGNWILHQHSFAPKRDYFKAYCAGLARRRVVDHLMWFRFPSAPDTKQQRIAVHYSRLAWVGGPLAELVASPTEQGKSATVQDDASKTEPPAKPDADM-------------------------DEADDTAGQQSDVRMDD-----------QKPVTPDEDPDHPYRRPDPFDLTEDDTPRTFAIVIKFLYCEEIQLNYLTFDELVSLAKTAHRWHLTDLYHATFSYVMDQDLLSGGLGIRTFLPLAAHEETPEQFRRYVCIAVGHHFDVLYPRLRAMKKANPEVTPLLWQTVFRQKMLSHVLHTISLYSPRMYNDYLLDVVLRYYEPHSDTTDDQLLGLLSQLSWDDMDVAAAFGADGASKWWSARAVRLAALAAYAPQTQALEVRIPWNIPLQRLLKQDVWSFQTEHVPCGPYICYLHVRKGAGREVSLFVHIWNRENKPLQDEARHEMVRVKCRATERNCRCDSSKQWSDSWHGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWRNAHGEHCGLAITTVLQFVNPKKQFEGPAKRSRT--SSPGRLQSPIQKKRSGSRMKLRESR 575          
BLAST of Gchil6383.t1 vs. uniprot
Match: R7QK62_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK62_CHOCR)

HSP 1 Score: 674 bits (1740), Expect = 1.010e-236
Identity = 356/587 (60.65%), Postives = 422/587 (71.89%), Query Frame = 0
Query:   39 LPSPGKTVWPAPPPSTPVGNWVLHQHSFAPKRQYFMSYCAGLARRRITDHLMWFQFPGVSDPHTQRVGVHYSRLAWVGGPLAELVSSPAEKKV----PARGGDNDVDMGAGKGAGDFGDGEDG-GAGGEQDGVGETTGNTQGQDQHVTDADAGSTGGNPGGAEKQVSVDEDPDHPYRRPDAYDLSEHDTPRTFAIVVKFLYCEEIRFNYLTFDELVALATTAHRWNLTDLYNATFAYVMDQDLLAGGLGIRTFLPLVAHEETPEPFRRYFCIAVGHHFDVLYPRLRAVKEANPS-----NTPALWKTVFKQKMMSHILHCITLYSHGLYDEYLLDVIMRYYEQQGDASDDEMLGLLSQLSWDDIDVGGVFSSEGMSKKWSSRAVRLAALASY-APQTAALEVRIPWNIPLQRLLKQQVWSFQTEHVPCGPYVCYLHVRKGNGREVSLFVHIWDRENKPLKEDARHEIVRVKCRATEANCMCDSSKQWSDCSHGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWRLAHGPDCGLAITTVLQFVKPKVPFEGPARRSRVRAMSPGRPQTPIQKKRS--GSRMKLRESR 612
            LPSP K   P  PPST VGNW+LH+HSFAP+R+YFMS+CA L+RRR+ DHLM F+FP       + V VHYSRLA  GGP+A L+    E+ V    P R  D + D        D    EDG G   E+D   E   N +  D  + D               + S+   PD P R+     LS+ DTPR F I+VKFLYCEE++FNYLTF E+V LA  AHRW LTDLYNATFAYVMDQ+LLA GLGIRTF+PLV+H ETPE FRRYFCIAVGHHFDVLYPRL+A+     +     + P LW  +  Q M+SH++HCI LYS   YD+YLLDV++RYYE +  + D+E+ GLLSQL+WD+I++   F+S+G SK WS+RA+R+AALAS+ APQT ALEVRIPWNIPLQ+LLK+  WSFQTEHV CGPYVCYLHVRKG G EVSLFVHIW R+ KP+  DARHE VRVKCRATE NC CDS +QWS+ SHGFLENL FEGKLE YPGLGWSQFLE KR++EWR +HG  CGLAITTVLQF++PK  FEGPARRS +RA SPGR  + IQKK S   +RMKLRESR
Sbjct:   10 LPSPTKISLPPMPPSTLVGNWILHEHSFAPQREYFMSFCAQLSRRRVVDHLMSFRFP---QEDIEPVAVHYSRLALAGGPMAALLREKKEEDVVMGTPGREKDKENDKS------DSSKKEDGKGKPVEKDVSSEKEANEKEADPMLDD---------------EPSLVRTPDSPPRKSPVL-LSDDDTPRVFNIIVKFLYCEEVQFNYLTFQEVVQLAVAAHRWQLTDLYNATFAYVMDQNLLADGLGIRTFIPLVSHAETPEAFRRYFCIAVGHHFDVLYPRLKAISLTESTAPVSLSVPPLWDVIVSQNMLSHVIHCIGLYSEESYDQYLLDVVLRYYEPKKGSMDEELQGLLSQLNWDEIELSETFASDGPSKNWSARAIRMAALASFDAPQTQALEVRIPWNIPLQKLLKENTWSFQTEHVLCGPYVCYLHVRKGTGPEVSLFVHIWYRDGKPIGADARHESVRVKCRATERNCRCDSGRQWSNTSHGFLENLSFEGKLEGYPGLGWSQFLEAKRIEEWRTSHGEGCGLAITTVLQFMRPKKQFEGPARRS-LRAPSPGRVVSAIQKKHSRPSTRMKLRESR 570          
The following BLAST results are available for this feature:
BLAST of Gchil6383.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IU02_9FLOR2.020e-30971.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QK62_CHOCR1.010e-23660.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..612
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..216
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 11..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:506478..508316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6383.t1Gchil6383.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 506478..508316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6383.t1 ID=Gchil6383.t1|Name=Gchil6383.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=613bp
MSEAPPVPPPPPPPPPPPPPPPKAKREQVLPSLTKPLSLPSPGKTVWPAP
PPSTPVGNWVLHQHSFAPKRQYFMSYCAGLARRRITDHLMWFQFPGVSDP
HTQRVGVHYSRLAWVGGPLAELVSSPAEKKVPARGGDNDVDMGAGKGAGD
FGDGEDGGAGGEQDGVGETTGNTQGQDQHVTDADAGSTGGNPGGAEKQVS
VDEDPDHPYRRPDAYDLSEHDTPRTFAIVVKFLYCEEIRFNYLTFDELVA
LATTAHRWNLTDLYNATFAYVMDQDLLAGGLGIRTFLPLVAHEETPEPFR
RYFCIAVGHHFDVLYPRLRAVKEANPSNTPALWKTVFKQKMMSHILHCIT
LYSHGLYDEYLLDVIMRYYEQQGDASDDEMLGLLSQLSWDDIDVGGVFSS
EGMSKKWSSRAVRLAALASYAPQTAALEVRIPWNIPLQRLLKQQVWSFQT
EHVPCGPYVCYLHVRKGNGREVSLFVHIWDRENKPLKEDARHEIVRVKCR
ATEANCMCDSSKQWSDCSHGFLENLRFEGKLERYPGLGWSQFLEEKRLDE
WRLAHGPDCGLAITTVLQFVKPKVPFEGPARRSRVRAMSPGRPQTPIQKK
RSGSRMKLRESR*
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