Gchil6374.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6374.t1
Unique NameGchil6374.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length156
Homology
BLAST of Gchil6374.t1 vs. uniprot
Match: A0A2V3J2M3_9FLOR (Glycine cleavage system H protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2M3_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 6.560e-80
Identity = 116/155 (74.84%), Postives = 136/155 (87.74%), Query Frame = 0
Query:    1 MATILRSLPLRRVAQTAPAFFRPSLARAFSSYPSDRKYKASHEWAKKDGDVVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYEKTLAE 155
            MAT+LRSLPLRRVAQ+APAF RPSL R FSSYPSDRKY +SHEWAK DGDV T+GITDHAQ+ALGDIVFADLP++G+ AVSGER ATVESVKAAADIY+PL GE+VGVN  L +  DLINS+PH+ GWIFQ+KVSDP++ D L+ +++YEKTL E
Sbjct:    1 MATLLRSLPLRRVAQSAPAFMRPSLLRHFSSYPSDRKYNSSHEWAKLDGDVATIGITDHAQAALGDIVFADLPEVGSSAVSGERAATVESVKAAADIYAPLDGEVVGVNEKLEETPDLINSEPHEEGWIFQIKVSDPSQLDALMGSDDYEKTLEE 155          
BLAST of Gchil6374.t1 vs. uniprot
Match: R7QNQ4_CHOCR (Glycine cleavage system H protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNQ4_CHOCR)

HSP 1 Score: 201 bits (511), Expect = 9.400e-64
Identity = 100/151 (66.23%), Postives = 121/151 (80.13%), Query Frame = 0
Query:   10 LRRVAQTAPAFFRPSLA-----RAFSSYPSDRKYKASHEWAKKDGDVVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYEKTLAE 155
            L R A+  P+    +LA      + +SYPSDRKYKASHEWAK DGDV TVGITDHAQ+ALGDIVFADLP++G+EA +GER ATVESVKAAADIY+PL+GE+VGVN SL D  DLIN  PHD GWIF++KV+DPA+ D L+ + +YEKT+AE
Sbjct:    4 LLRAARAPPSLRARALAVLPRFLSAASYPSDRKYKASHEWAKLDGDVATVGITDHAQAALGDIVFADLPEVGSEASAGERAATVESVKAAADIYAPLSGEVVGVNDSLDDSPDLINKTPHDDGWIFRIKVNDPAQIDALMDSADYEKTIAE 154          
BLAST of Gchil6374.t1 vs. uniprot
Match: A0A4Q7Z909_9GAMM (Glycine cleavage system H protein n=1 Tax=Fluviicoccus keumensis TaxID=1435465 RepID=A0A4Q7Z909_9GAMM)

HSP 1 Score: 158 bits (399), Expect = 4.160e-47
Identity = 71/125 (56.80%), Postives = 99/125 (79.20%), Query Frame = 0
Query:   30 SSYPSDRKYKASHEWAKKDGDVVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYEKTLA 154
            S+ PSD KY +SHEWA+ DGDVVTVGITDHAQ ALGD+V+ +LPD+G    +G+    VESVKAA+DIY+P++GEI+ VN +L D  ++IN+DP++ GWI++++VSD +E D L+S EEY+  +A
Sbjct:    2 SNTPSDLKYASSHEWARLDGDVVTVGITDHAQEALGDLVYVELPDVGDTVAAGDEAGVVESVKAASDIYAPVSGEIIAVNEALGDTPEIINTDPYNEGWIYKIRVSDVSELDNLMSGEEYDAQVA 126          
BLAST of Gchil6374.t1 vs. uniprot
Match: A0A3E0H8D0_9GAMM (Glycine cleavage system H protein n=2 Tax=Paraperlucidibaca TaxID=1268272 RepID=A0A3E0H8D0_9GAMM)

HSP 1 Score: 154 bits (390), Expect = 9.120e-46
Identity = 68/120 (56.67%), Postives = 95/120 (79.17%), Query Frame = 0
Query:   30 SSYPSDRKYKASHEWAKKDGDVVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEY 149
            S  P++ KY ASHEWA+ DGDVVTVGITDHAQ ALGD+V+ +LP++G    +G+    VESVKAA+DIY+P++GEI+ +N +L D  +++N++P+ GGW++Q+K+SD AE   LLSAEEY
Sbjct:    2 SQLPAELKYAASHEWARLDGDVVTVGITDHAQDALGDLVYVELPNVGDAVSAGQEAGVVESVKAASDIYAPVSGEIIAINDALVDAPEIVNTEPYAGGWLYQIKISDAAELGELLSAEEY 121          
BLAST of Gchil6374.t1 vs. uniprot
Match: UPI0003B5ED9C (glycine cleavage system protein GcvH n=1 Tax=Perlucidibaca piscinae TaxID=392589 RepID=UPI0003B5ED9C)

HSP 1 Score: 152 bits (385), Expect = 5.090e-45
Identity = 66/120 (55.00%), Postives = 95/120 (79.17%), Query Frame = 0
Query:   30 SSYPSDRKYKASHEWAKKDGDVVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEY 149
            S  P++ KY ASHEWA+ +GDVVTVGITDHAQ ALGD+V+ +LPD+G +  +G+    VESVKAA+DIY+P++GEI+ VN +L D  +++NS+P+ GGW++++++SD AE D LL A+ Y
Sbjct:    2 SQTPAELKYAASHEWARLEGDVVTVGITDHAQDALGDLVYVELPDVGKQVKAGDEAGVVESVKAASDIYAPVSGEIIEVNEALVDAPEIVNSEPYSGGWLYRIRISDAAELDRLLDADTY 121          
BLAST of Gchil6374.t1 vs. uniprot
Match: A0A507WA26_9GAMM (Glycine cleavage system H protein n=1 Tax=Moraxellaceae bacterium AER2_44_116 TaxID=2591038 RepID=A0A507WA26_9GAMM)

HSP 1 Score: 150 bits (380), Expect = 3.210e-44
Identity = 67/121 (55.37%), Postives = 94/121 (77.69%), Query Frame = 0
Query:   30 SSYPSDRKYKASHEWAKKDGDVVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYE 150
            S+ P D KY  SHEWA+ DGD++TVGITDHAQ ALGD+VF +LP++G    +G+    VESVKAA+DIY+P++GE+V +N +L D  +LINSDP+  GW++++KVSD  E D ++SA+EY+
Sbjct:    2 SNTPIDLKYATSHEWARLDGDIITVGITDHAQEALGDLVFVELPEVGDSVNAGDEAGVVESVKAASDIYAPVSGEVVEINPALEDTPELINSDPYGEGWMYKIKVSDLTELDDMMSADEYD 122          
BLAST of Gchil6374.t1 vs. uniprot
Match: A0A3M2E1L9_9GAMM (Glycine cleavage system H protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2E1L9_9GAMM)

HSP 1 Score: 150 bits (380), Expect = 3.310e-44
Identity = 69/126 (54.76%), Postives = 96/126 (76.19%), Query Frame = 0
Query:   30 SSYPSDRKYKASHEWAKKDGD-VVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYEKTLA 154
            S  P+D KY   HEW + +GD +VTVGITDHAQ  LGD+V+ +LP++GAE  +G+     ESVKAA+D+YSP++GEIV VN +L D  + +N+DP++ GW+F+VK+SDP+E D LLSAEEY + +A
Sbjct:    2 SDIPADLKYSKDHEWVRDEGDGIVTVGITDHAQELLGDMVYVELPEVGAEISAGDEAGVAESVKAASDVYSPVSGEIVEVNEALEDAPETVNNDPYNDGWMFKVKLSDPSELDDLLSAEEYAELIA 127          
BLAST of Gchil6374.t1 vs. uniprot
Match: A0A1Y0I2Y2_9GAMM (Glycine cleavage system H protein n=1 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0I2Y2_9GAMM)

HSP 1 Score: 150 bits (380), Expect = 3.310e-44
Identity = 69/121 (57.02%), Postives = 95/121 (78.51%), Query Frame = 0
Query:   30 SSYPSDRKYKASHEWAKKDGD-VVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEY 149
            S  P++ KY +SHEWA+ +GD VVTVGITDHAQ  LGD+VF +LP++ AE  +G+    VESVKAA+DIYSP++G +V VN+ L +  DL+NSDP++ GW F+VK+ DP+E +GLLSA++Y
Sbjct:    2 SQIPNELKYLSSHEWARLEGDGVVTVGITDHAQDLLGDVVFVELPEVDAELSAGDEAGVVESVKAASDIYSPVSGVVVAVNADLEESPDLVNSDPYNDGWFFKVKIKDPSELEGLLSADDY 122          
BLAST of Gchil6374.t1 vs. uniprot
Match: A0A4R1K284_9GAMM (Glycine cleavage system H protein n=1 Tax=Celerinatantimonas diazotrophica TaxID=412034 RepID=A0A4R1K284_9GAMM)

HSP 1 Score: 150 bits (380), Expect = 3.420e-44
Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 0
Query:   30 SSYPSDRKYKASHEWAKKDGD-VVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYEKTLAE 155
            S  PSD K+  SHEW +K+GD V T+GI+DHAQ  LGD+VF DLPD+  E   G+  A  ESVKAA+DIYSPL+G +V +N  L D  +L+NSDP+  GW+FQVK SD  E++ LLSA+EY+ TL E
Sbjct:    2 SDIPSDLKFTTSHEWVRKEGDGVYTIGISDHAQELLGDMVFVDLPDVDDEVAGGDDCAVAESVKAASDIYSPLSGTVVAINEELEDSPELLNSDPYGDGWLFQVKASDGEEYEQLLSADEYQDTLEE 128          
BLAST of Gchil6374.t1 vs. uniprot
Match: B8E2E6_DICTD (Glycine cleavage system H protein n=4 Tax=Dictyoglomus TaxID=13 RepID=B8E2E6_DICTD)

HSP 1 Score: 150 bits (378), Expect = 5.710e-44
Identity = 67/124 (54.03%), Postives = 93/124 (75.00%), Query Frame = 0
Query:   32 YPSDRKYKASHEWAKKDGDVVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSPLTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYEKTLAE 155
            YP DRKY   HEWAK +G+V  +GIT HAQ  LGDIV  DLP++G E    E  A +ESVK+A+D+YSPL+G+++ +N SL  + +LIN DP++ GW+ +++VSDP E++GLLSAEEY+K + E
Sbjct:    2 YPEDRKYSKDHEWAKIEGNVAIIGITYHAQEELGDIVHVDLPEVGKEVKQNEVLAVIESVKSASDVYSPLSGKVIEINESLKGKPELINEDPYNAGWLVKLEVSDPKEYEGLLSAEEYKKLIGE 125          
The following BLAST results are available for this feature:
BLAST of Gchil6374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2M3_9FLOR6.560e-8074.84Glycine cleavage system H protein n=1 Tax=Gracilar... [more]
R7QNQ4_CHOCR9.400e-6466.23Glycine cleavage system H protein n=1 Tax=Chondrus... [more]
A0A4Q7Z909_9GAMM4.160e-4756.80Glycine cleavage system H protein n=1 Tax=Fluviico... [more]
A0A3E0H8D0_9GAMM9.120e-4656.67Glycine cleavage system H protein n=2 Tax=Paraperl... [more]
UPI0003B5ED9C5.090e-4555.00glycine cleavage system protein GcvH n=1 Tax=Perlu... [more]
A0A507WA26_9GAMM3.210e-4455.37Glycine cleavage system H protein n=1 Tax=Moraxell... [more]
A0A3M2E1L9_9GAMM3.310e-4454.76Glycine cleavage system H protein n=1 Tax=Gammapro... [more]
A0A1Y0I2Y2_9GAMM3.310e-4457.02Glycine cleavage system H protein n=1 Tax=Oleiphil... [more]
A0A4R1K284_9GAMM3.420e-4456.69Glycine cleavage system H protein n=1 Tax=Celerina... [more]
B8E2E6_DICTD5.710e-4454.03Glycine cleavage system H protein n=4 Tax=Dictyogl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017453Glycine cleavage system H-protein, subgroupTIGRFAMTIGR00527TIGR00527coord: 32..154
e-value: 2.1E-43
score: 145.4
NoneNo IPR availableGENE3D2.40.50.100coord: 22..154
e-value: 2.8E-46
score: 158.4
NoneNo IPR availablePANTHERPTHR11715:SF3GLYCINE CLEAVAGE SYSTEM H PROTEIN, MITOCHONDRIALcoord: 25..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..28
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 36..154
e-value: 9.3E-42
score: 141.8
IPR033753Glycine cleavage system H-protein/SimiateCDDcd06848GCS_Hcoord: 38..132
e-value: 2.13714E-44
score: 139.591
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 25..155
IPR002930Glycine cleavage system H-proteinHAMAPMF_00272GcvHcoord: 33..154
score: 35.573273
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 51..133
score: 23.792379
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 32..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:372730..373270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6374.t1Gchil6374.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 372730..373270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6374.t1 ID=Gchil6374.t1|Name=Gchil6374.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=156bp
MATILRSLPLRRVAQTAPAFFRPSLARAFSSYPSDRKYKASHEWAKKDGD
VVTVGITDHAQSALGDIVFADLPDIGAEAVSGERTATVESVKAAADIYSP
LTGEIVGVNSSLTDEADLINSDPHDGGWIFQVKVSDPAEFDGLLSAEEYE
KTLAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017453GCV_H_sub
IPR033753GCV_H/Fam206
IPR002930GCV_H
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif