Gchil6349.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6349.t1
Unique NameGchil6349.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length477
Homology
BLAST of Gchil6349.t1 vs. uniprot
Match: A0A2V3J2R7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2R7_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 3.320e-43
Identity = 141/359 (39.28%), Postives = 172/359 (47.91%), Query Frame = 0
Query:   67 PAPASAPSSDRLARSRATGQSYRDNERQHIMRLIVAVQNGRLENSLLFVLFTHAYK--------RARHAATLNSLPLPPPYRATERVCHTLCETRLFALSPPAARLLEQRALSGALAAVLLELLMHRRNMWGTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXPQSHVHAQDTSDRRRQRRPPYRTATTAHDAQRITHFAMRVFSRELPPSPPPIAPSAAAHALRMHVLHRMAHLAAAAHHVDHCEATRNAHYSLVQRFTTAQRPVKRARPRPVSPTTPHVERFPLRSASSSLSXXXXXXXXWSATCEDAHGAVMRHAASVDRAKRCSRCGVLKTSGSGHARSKCADGVSIASRVPFRAS 417
            PA +    SDRLA+SRATGQSYRDNER+HI RLI A+++GRLEN+LLFVL+ +            +RHAA  +      P+   E  C  + + RL ALS     +L Q  +SGALA VLLEL++HRRNM G                              P     A   +DRR    PPYRTATT   A  I   A+R F RE          S+   A+  HV  R+ H+A AA+H+D+ EA  N       R +   R  +R      S           R   S L               DA G   R     D AKRCSRCGVLK +GSGH RSKCADG+ I S VPF AS
Sbjct:   48 PASSLRAQSDRLAKSRATGQSYRDNEREHIFRLITAIEHGRLENNLLFVLYANPSAPLSCATCISSRHAAQWHV-----PWDVAEDGCE-IKDVRLHALSARTQAMLGQGFISGALATVLLELMLHRRNMLGEPC---------------------------PVQLGAAVADADRRXXXXPPYRTATTQEGAASIVQLAVRQFCRE----------SSRPRAMWDHVQWRLGHVAVAAYHMDNIEAMLNPQV----RLSDCARHSRRGAELECSDAA--------RGVESELF--------------DALGMGRRG----DGAKRCSRCGVLKITGSGHGRSKCADGLGICSAVPFPAS 333          
BLAST of Gchil6349.t1 vs. uniprot
Match: A0A2V3J040_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J040_9FLOR)

HSP 1 Score: 122 bits (307), Expect = 4.500e-27
Identity = 117/388 (30.15%), Postives = 157/388 (40.46%), Query Frame = 0
Query:   75 SDRLARSRATGQSYRDNERQHIMRLIVAVQNGRLENSLLFVLFTHAYKRARHAAT---------------------------------------------LNSLPLPPPYRATERV---CHTLCETRLFALSPPAARLLEQRALSGALAAVLLELLMHRRNMWGTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXPQSHVHAQDTSDRRRQRRPPYRTATTAHDAQRITHFAMRVFSRELPPSPPPIAPSAAAHALRMHVLHRMAHLAAAAHHVDHCEATRNAHYSLVQRFTTAQRPVKRARPRPVSPTTPHVERFPLRSASSSLSXXXXXXXXWSATCEDAHGAVMRHAASVDRAKRCSRCGVLKTSGSGHARSKCADGVSIASRVPF 414
            S RLA+SRATGQ YRDNE+  + RLI+A+QNGR+EN LLF +++ A+KR R +AT                                               +  L P +   + +   C +     L  LS    R+L QR +SGALA  LLE+++HRRN+  T +                                 +   +D RR++R P+R A      Q +   A+R FSRE    P           L  +V  RM +L+    H D  EA  NA   LV                P+    P VE +       S S        W  T  +               +RC+RCGVLK SGSGH RSKC DG+ +AS VPF
Sbjct:   75 SRRLAKSRATGQKYRDNEQHRVFRLIIAIQNGRMENCLLFTVYS-AHKRRRSSATPCVEGCAASYCSPSCAMGAASCTFWNKAAGRVEQHRFLYQRRYQCARTKQLGPLWFRGDEITEDCESGVHVLLHPLSNRCQRVLRQRFISGALATTLLEIILHRRNIVRTQADDSWDEDGDGF----------------------SSVETDGRRRKRSPFRKAVAESTMQSLMQLAIREFSREAGSHPD----------LADYVQRRMGNLSILMFHYDDAEAWCNAETDLV------------GDDGPLEDEMPDVEGW-------SCSGEVNGFGSWDVTLREGP-------------RRCTRCGVLKVSGSGHGRSKCMDGLGVASTVPF 397          
The following BLAST results are available for this feature:
BLAST of Gchil6349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2R7_9FLOR3.320e-4339.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J040_9FLOR4.500e-2730.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..476
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:177871..179301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6349.t1Gchil6349.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 177871..179301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6349.t1 ID=Gchil6349.t1|Name=Gchil6349.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=477bp
MPAFAASSSVSRARRAAAPRRPPFPPSLRIQKTHRPPQSTSSLSPLSPLS
PLSPLSSSLCSASASHPAPASAPSSDRLARSRATGQSYRDNERQHIMRLI
VAVQNGRLENSLLFVLFTHAYKRARHAATLNSLPLPPPYRATERVCHTLC
ETRLFALSPPAARLLEQRALSGALAAVLLELLMHRRNMWGTSSSSLSSSS
SLSTTSTSTSSAAAAAAAAVPQSHVHAQDTSDRRRQRRPPYRTATTAHDA
QRITHFAMRVFSRELPPSPPPIAPSAAAHALRMHVLHRMAHLAAAAHHVD
HCEATRNAHYSLVQRFTTAQRPVKRARPRPVSPTTPHVERFPLRSASSSL
SPSLSPSLSWSATCEDAHGAVMRHAASVDRAKRCSRCGVLKTSGSGHARS
KCADGVSIASRVPFRASAPPHLQLDCFDEYLDDADDDYPDDYHDSFDGFD
DDDDDDDYYDDARNFMSHARSTVPLI*
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