Gchil6341.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6341.t1
Unique NameGchil6341.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length925
Homology
BLAST of Gchil6341.t1 vs. uniprot
Match: A0A2V3J1N2_9FLOR (Protein aardvark n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1N2_9FLOR)

HSP 1 Score: 676 bits (1745), Expect = 3.540e-232
Identity = 458/611 (74.96%), Postives = 507/611 (82.98%), Query Frame = 0
Query:  316 MGVPTALRFDDLDPQQTISSLPGSSS-SKPPLPPPKALHRQRSKPLP-LQSHSTPLERKDDAPASVLETAAPSSTSPSEVYTSISERGERVAAAFERLGKQTDEYPETPSDLAGGLSPKEVLIPLIVEAMHQHRSDPKVADRALTILRRLTVSENCRRCIGDNGGIDAVVEIMRAHSLRVGIQTQGCLTLANLAFRNRNNKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTNRSDAGEQETSVASGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMERLRTAGGIQVLISSLKRNVGSLKLAEVGMSLTRVVSEDDRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMNECTTASPDGVCYFMKALCNATFDSLASKTFAGRCGAVEATLRIMSDSSYREVGRVIEDACRLLRNLLDSVTQNQRNMLKHRGIAVVLDAARVHGEALAGVAEHSVAIFVSMASNRGFASQLQERSGDVSQLAKRFRKAHEGNPRVEAQVATLTNNLQRDERSVASAGSTELREWRTKSSMERALRPVRSLHRARHSDDQETRLQRLRSMPLPMVRNRN 924
            M VPTALRFDD+D    I   P ++S  KPPLPP + +HR R++  P L++  +P ER++D  AS  + + P  TS SE Y SISERGERVAAAFERLGKQT EY ++PSDLAGGLSPKEV+IPLIVEAM QHRSDPKVADRALTILRRLTVSENCR+CIG+NGGI+AVVEIMR+HSLR GIQTQGCLTLANLAFRNR NKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXX TNRSDAGEQETSVASGAVE                                 MERLRTAGGI+VL+S+L++NV S KL+EVGMSLTRVV EDDRNK     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +MNECTTASPDGVCYF+KALCNATFDS+ASK FAGR GA+EATLRIMS+ +Y+EVGRV+EDACRLLRNLLD V QNQRN+LKHRGIAVVLD ARVHGEALAGVAEHSVAIFVSMA+NRGFASQ+QE SGD++QLA+R RKAHEGNPRVE QV TL   L+ DERSVAS GS++LR+W  KSS+ERALRPVRSLHR R  D+QE RLQRLRSMPLP+ RNR+
Sbjct:    1 MTVPTALRFDDIDSPSAIPPAPPNTSHGKPPLPPARNIHRPRTRASPPLRTTQSP-ERQEDV-ASSRDASPPIDTSLSEEYASISERGERVAAAFERLGKQTYEYQDSPSDLAGGLSPKEVIIPLIVEAMRQHRSDPKVADRALTILRRLTVSENCRKCIGENGGIEAVVEIMRSHSLRAGIQTQGCLTLANLAFRNRTNKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNRSDAGEQETSVASGAVEVLLTALERYICSETVQSNALIALTNIASRSPYGMERLRTAGGIEVLVSTLQQNVRSEKLSEVGMSLTRVVVEDDRNKELFGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVNIMNECTTASPDGVCYFLKALCNATFDSMASKIFAGRSGAIEATLRIMSEEAYKEVGRVVEDACRLLRNLLDGVVQNQRNLLKHRGIAVVLDVARVHGEALAGVAEHSVAIFVSMAANRGFASQVQEGSGDINQLARRLRKAHEGNPRVETQVNTLIRALEHDERSVASLGSSDLRDWSNKSSLERALRPVRSLHRGRSGDEQEKRLQRLRSMPLPLGRNRS 609          
BLAST of Gchil6341.t1 vs. uniprot
Match: R7QFR9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFR9_CHOCR)

HSP 1 Score: 307 bits (786), Expect = 2.500e-89
Identity = 234/548 (42.70%), Postives = 310/548 (56.57%), Query Frame = 0
Query:  388 TSPSEVYTSISERGERVAAAFERLGKQ------TDEYPETPSDLAGGLSPKEVLIPLIVEAMHQHRSDPKVADRALTILRRLTVSENCRRCIGDNGGIDAVVEIMRAHSLRVGIQTQGCLTLANLAFRNRNNKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTNRSDAGEQETSVASGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMERLRTAGGIQVLISSLKRNVGSLKLAEVGMSLTRVVSEDDRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMNECTTASPDGVCYFMKALCNATFDSLASKTFAGRCGAVEATLRIMSDSSYREVGRVIEDACRLLRNLLDSVTQNQRNMLKHRGIAVVLDAARVHGEALAGVAEHSVAIFVSMASNRGFASQLQERSGDVSQLAKRFRKAHEGNPRVEAQVATLTNNLQR--DERSVASAGSTELRE-----WR---TKSSMERALRPVRSLHRARHSD-DQETRLQRLRSMPLP 918
            +SP E Y S ++R ER+A A ER+ K       + E    PSD     SPK  +IPLIV+A+ QH  DPKVAD+ LT LRRLTV   CRR IG+ GG++A+VE+MRAHSLRV IQTQ CL LANLA++   NK A M   XXXXXXXXXXXXXXXXXXXXXXXXXXXXFTN +  GEQ+ SV +GAVE                                 MERLR+AGG+Q +I+S+  N+ S +L+E+ +S  +V+ E++ N+                                                          M +  ++  +     +KAL N+T+DSLA+KT AGR GAVEA L ++S  +++    V+EDACR+LRNL D V  N R +++  G+  VL+AAR HG + AGVAEH VAIFV++++N+  A QL+E   D + +A+  + AH GN RV  QVA L + L+   D+    S  S E RE     WR   T+ S E +LR  +SL +    + +Q TRLQRLRS+PLP
Sbjct:   90 SSPLEHYESKTQRSERIATALERIAKNAAFFGLSAEENACPSDT----SPKTAVIPLIVDAITQHVRDPKVADQGLTTLRRLTVDPVCRRTIGECGGVEAIVEVMRAHSLRVRIQTQACLALANLAYKCPENKRAFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTNGAIEGEQDASVTAGAVEVLVTALEQYPKSNVVQQQCMIALTNIAAASPLGMERLRSAGGVQAVIASMHNNIRSSQLSEIALSCAKVLVEEESNQKIFGHDGGIEAITMVLDEHRGHTAIAVRGCAAFRQLAFQRENRDLLGRCGSIRAIITAMMDTASSKAETAAVLLKALSNSTYDSLANKTLAGRLGAVEAALHLISPDTFQSNTGVVEDACRVLRNLADGVQLNHRLLIEKGGVVAVLEAAREHGTSSAGVAEHCVAIFVNLSANQSLAEQLKEGGKDFAAMARELQLAHPGNDRVYKQVADLLSILEPKVDDGEPVSTESVEWRESKSCTWRETATQISFEESLRSSKSLRKTFSKEGEQLTRLQRLRSLPLP 633          
The following BLAST results are available for this feature:
BLAST of Gchil6341.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1N2_9FLOR3.540e-23274.96Protein aardvark n=1 Tax=Gracilariopsis chorda Tax... [more]
R7QFR9_CHOCR2.500e-8942.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 642..684
e-value: 6.7
score: 14.6
coord: 510..552
e-value: 170.0
score: 3.7
coord: 729..774
e-value: 62.0
score: 7.1
coord: 554..597
e-value: 2.3
score: 17.2
coord: 466..508
e-value: 6.7
score: 14.6
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 477..522
score: 9.7824
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 566..596
score: 8.5574
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 425..558
e-value: 2.7E-17
score: 64.3
coord: 559..917
e-value: 6.2E-32
score: 112.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 896..924
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 896..910
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..152
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 609..686
coord: 435..600
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 569..866
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 435..619

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:159635..162409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6341.t1Gchil6341.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 159635..162409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6341.t1 ID=Gchil6341.t1|Name=Gchil6341.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=925bp
MQSGPIPFSASTSFLMDHADAPAVRPRRRRLRLASLLSRRFSHLFHSRKE
PAPAHSPRAPRQAPPPLSDVRVAHEEPPSSHAPHTPPTSPPDVRSEPSHR
LKSLFAAARSVTDNDDDSARSADPSLADSSHTSIPLSPVTGTSHSDSTVG
SVTPRETKHHHSPPPAASPSDPLSVRFQHDRFKPADHLLSQPNPSNVTSS
TFAEPVPPTKTSATFSSDDSQIQSPTLSPQSPHLEDTSNQFSFRAHIPTA
ENLNTGLSSDSDSDQNFPSSQNEISSPNVKDPAPTNISQPHSYNERLVHR
SSPSRPGARPRAPKSMGVPTALRFDDLDPQQTISSLPGSSSSKPPLPPPK
ALHRQRSKPLPLQSHSTPLERKDDAPASVLETAAPSSTSPSEVYTSISER
GERVAAAFERLGKQTDEYPETPSDLAGGLSPKEVLIPLIVEAMHQHRSDP
KVADRALTILRRLTVSENCRRCIGDNGGIDAVVEIMRAHSLRVGIQTQGC
LTLANLAFRNRNNKEAVMKCSGLKVVVGALSAHSNVEQIQAWGCLAIRNF
TNRSDAGEQETSVASGAVEVLLSALERYSGSETVQNNALIALTNIAGRSP
YGMERLRTAGGIQVLISSLKRNVGSLKLAEVGMSLTRVVSEDDRNKELFG
QSGGIQALAAIMDTHRRHLTISVKGCAAVRYLAFRRKNREIMGSCGIIRT
IVCVMNECTTASPDGVCYFMKALCNATFDSLASKTFAGRCGAVEATLRIM
SDSSYREVGRVIEDACRLLRNLLDSVTQNQRNMLKHRGIAVVLDAARVHG
EALAGVAEHSVAIFVSMASNRGFASQLQERSGDVSQLAKRFRKAHEGNPR
VEAQVATLTNNLQRDERSVASAGSTELREWRTKSSMERALRPVRSLHRAR
HSDDQETRLQRLRSMPLPMVRNRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold