Gchil6323.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A2V3J1D7_9FLOR (THO complex subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1D7_9FLOR) HSP 1 Score: 290 bits (741), Expect = 1.220e-94 Identity = 175/254 (68.90%), Postives = 193/254 (75.98%), Query Frame = 0
Query: 1 MLNIDRPLDDIIKESIQAKRADRADRAARRRDQ-VSKRKTPAPKARLTPAASNRSTERSPEKDTSLPAAKARRSISKKRKNRRKPNVTPAAPA-DAQTNARSEPAQTPTVADTVPHYLPPSAQRRSNGVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSKNGRENPSKKSQPAGEDYRDRSRSPENDTFDRKESPSADRNRNGQQ 252
M+NIDRPLDDIIKES++AKRADRA ARRRDQ +KRK P K+R P AS ERSPEKD +LPAAK+RRSI+ D+ +A PA + PHYL SAQRRSNGVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRY +GTS+CEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSKN R+N KKSQP +YRD SRSP + F+RK+SP ADRNRNGQQ
Sbjct: 1 MMNIDRPLDDIIKESLEAKRADRA---ARRRDQGATKRKAPNNKSR--PPASAPPKERSPEKDATLPAAKSRRSITXXXXXXXXXXXXXXXXXXDSNGSAEPAPATASAPMEPAPHYLSSSAQRRSNGVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYPSGTSTCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSKNSRDNAPKKSQPVDAEYRDHSRSP-GEPFERKDSPFADRNRNGQQ 248
BLAST of Gchil6323.t1 vs. uniprot
Match: R7Q9Y4_CHOCR (Similar to Aly, THO complex subunit, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9Y4_CHOCR) HSP 1 Score: 125 bits (313), Expect = 4.510e-30 Identity = 96/237 (40.51%), Postives = 120/237 (50.63%), Query Frame = 0
Query: 2 LNIDRPLDDIIKESIQAKRADRADRAARRRDQVSKRKTPAPKARLTPAASNRSTERSPEKDTSLPAAKARRSISK-----------------------KRKNRRKPNVTPAAPADAQTNARSEPAQTPT----------VADTVPHYLPPSAQRRSN--GVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVT 203
+NIDRPLD+I+KES+ A++A R A+R++ +KT + AS P L AK SISK +R N N P A + +P + VA+ + A RR+ GVK+ VSNLHPGVT++DI ELFETVGP+K A L + NG S+CEAEVIFE M DALEAI RYN VPLDN PL ITL T
Sbjct: 1 MNIDRPLDEIVKESVAARKAARQ---AKRKEIAQTKKTKGTDSAAVQKAS-------PVLAQKLGVAKKEGSISKXXXXXXXXXXXXXXXXXXXXXXXRRTNGNTNNARPNGNAPRPQSRNDKPFRNDKAPRSSQHQGGVANRLSTKASGQAARRATPKGVKIRVSNLHPGVTETDIGELFETVGPIKKAHLKTFANGHSACEAEVIFERMADALEAINRYNQVPLDNHPLHITLAT 227
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A7S0G117_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G117_9RHOD) HSP 1 Score: 84.7 bits (208), Expect = 1.030e-16 Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 0
Query: 123 RSNGVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSKNG 209
+S G K+VV NL PGV+ DI +LF+ +GP+K A++ +G S+ AEV+F + DAL AI +YN VPLDN+PL+I+L T G
Sbjct: 33 QSPGAKIVVGNLDPGVSNGDINDLFKGIGPIKQAMVIFNSDGKSTGSAEVVFASTDDALAAIAKYNGVPLDNRPLEISLSTNHGNEG 119
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A1X6P4P6_PORUM (RRM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4P6_PORUM) HSP 1 Score: 86.3 bits (212), Expect = 7.610e-16 Identity = 79/234 (33.76%), Postives = 111/234 (47.44%), Query Frame = 0
Query: 2 LNIDRPLDDIIKESIQAKRADR----------------------ADRAARRRDQVSKR---KTPAPKARLTPAASNRSTERSPEKDTSLPAAKARRSISKKRKNRRKPNVTPAAPADAQTNARSEPAQTPTVADTVPHYLPPSAQRRSNGVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSKNGR 210
+NIDR LDDI+KE+ ++R+ + A ++ RRR + +R A AR++ S R+ AK SISKK R ++ A A E + A +A + + G K+VV NLH GVT DI +LF VG L+ A++ G S+ AEV+F DALE+IKRYN VPLDN+PL+I+L T+ S R
Sbjct: 4 MNIDRALDDIVKENRASRRSTKKAADGAXXXXXXXXXXXMEGTGARKSRRRRRKTGERGYAAMDAESARMSDTLSRRT-------------AKGGGSISKKGGRARGGGLSSATVAAISRAGAMEIERKAAAAAA-------NASKANAGCKIVVHNLHHGVTNGDINDLFSGVGKLQRALVIYDVRGNSTGVAEVVFARRDDALESIKRYNGVPLDNKPLRISLATSDSPTSR 217
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A0E0HYG8_ORYNI (RRM domain-containing protein n=1 Tax=Oryza nivara TaxID=4536 RepID=A0A0E0HYG8_ORYNI) HSP 1 Score: 75.1 bits (183), Expect = 3.150e-13 Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 117 PPSAQRRS--NGVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSK 207
PP+A RS G K+ +SNL PGVT D+ ELF +G LK + ++G S AEV+F DALEAIKRY+ V LD P++I L+ S+
Sbjct: 11 PPAAAARSLETGTKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIKRYDGVILDGNPMKIDLIGNNSE 103
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A835LM92_9MAGN (RRM domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LM92_9MAGN) HSP 1 Score: 78.2 bits (191), Expect = 4.030e-13 Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 0
Query: 126 GVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTT 204
G K+ VSNLH GVT DI ELF +G LK + +NG SS AEVIF DAL A+KRYN V LD +P+ I ++ T
Sbjct: 82 GAKLYVSNLHSGVTNEDIKELFSLIGELKRYTVHYDRNGRSSGSAEVIFTRRADALAAMKRYNNVQLDGKPMNIEIIGT 160
BLAST of Gchil6323.t1 vs. uniprot
Match: V4UVU1_CITCL (RRM domain-containing protein n=2 Tax=Citrus TaxID=2706 RepID=V4UVU1_CITCL) HSP 1 Score: 76.6 bits (187), Expect = 4.400e-13 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 126 GVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSK 207
G K+ VSNLHPGVT DI ELF +G LK + +NG S AEV++ DA A+KRYN V LD +P++I +V T ++
Sbjct: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A7S0D067_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D067_MICPS) HSP 1 Score: 76.6 bits (187), Expect = 1.010e-12 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query: 128 KVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLV 202
K+++SNLHP VT DI ELF VG +K A L QNG S AEVI DA++AIK YN V LD +PL+I LV
Sbjct: 82 KLIISNLHPNVTNQDIKELFSQVGQVKKAGLNFDQNGRSKGTAEVILARRQDAMQAIKTYNGVKLDGRPLRIELV 156
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A067EA94_CITSI (RRM domain-containing protein n=6 Tax=Citrus TaxID=2706 RepID=A0A067EA94_CITSI) HSP 1 Score: 76.6 bits (187), Expect = 1.560e-12 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 126 GVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSK 207
G K+ VSNLHPGVT DI ELF +G LK + +NG S AEV++ DA A+KRYN V LD +P++I +V T ++
Sbjct: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
BLAST of Gchil6323.t1 vs. uniprot
Match: A0A2H5NUB8_CITUN (RRM domain-containing protein n=3 Tax=Citrus TaxID=2706 RepID=A0A2H5NUB8_CITUN) HSP 1 Score: 76.6 bits (187), Expect = 2.550e-12 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 126 GVKVVVSNLHPGVTQSDIAELFETVGPLKSAVLPRYQNGTSSCEAEVIFENMPDALEAIKRYNLVPLDNQPLQITLVTTRSK 207
G K+ VSNLHPGVT DI ELF +G LK + +NG S AEV++ DA A+KRYN V LD +P++I +V T ++
Sbjct: 132 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 213 The following BLAST results are available for this feature:
BLAST of Gchil6323.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil6323.t1 ID=Gchil6323.t1|Name=Gchil6323.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=290bpback to top |