Gchil6320.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6320.t1
Unique Name	Gchil6320.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	368

Homology

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BLAST of Gchil6320.t1 vs. uniprot
Match: A0A2V3J175_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J175_9FLOR)

HSP 1 Score: 564 bits (1453), Expect = 2.610e-200
Identity = 285/356 (80.06%), Postives = 312/356 (87.64%), Query Frame = 0

Query:    1 MKANGAKKEMRMLVLVALAAITSSVSLFYALSRPALDVGRLESRLRLIEQYARAGADVPXXXXXXXXXXXXXXXXXXXXXXYNRPPKTGSTTVRIAVKRALDEHGLTAAKCFNMIEWNEMGLKTIINRRDVDFYGCHTRMTRDRYDFVSRLRGGNVTFVTNTREPSNIILSAYLQENRDRKVADITDDKQMEEEIERFKKHVESYPVDALYRYHGADVTLNQCPIEWVHEDAMRRVAERYEVVIDLSRPEESTAMMEAVTGLRPDFTGHFNERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQYNIIKDRLMQNRCFDEGSGSFSLCEKAVLKKEEISEKNRKESYAAREAL 356
            MKA   ++EMRML LVALAA+ S+VSLFY+LSRPALDV RLESRLRLIEQYARAGADVP                      YNRPPKTGSTTVRIAVKRALDE  + AAKCFNMIEWNEMGLKTII+RRDVDFYGCHTR+T +RYDFVSRLRGGNVTFVTNTREPSNI+LSAYLQ NRDR VADITD  +M++EIER+K+HVESYPVDALYRYHGA V L +CP EWVHEDAMR +AERYEVVIDLSRPEESTAMME VTGLRPDFTGH+NERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQ+NIIKDRLMQNRCFDE SG ++LCEKAVLKKE+I+E++R+ESYAAR+AL
Sbjct:    1 MKAAAPRREMRMLALVALAAVASTVSLFYSLSRPALDVERLESRLRLIEQYARAGADVPPPPAPIVTTVPSAHSSQKRLIFYNRPPKTGSTTVRIAVKRALDEREMRAAKCFNMIEWNEMGLKTIIHRRDVDFYGCHTRLTTERYDFVSRLRGGNVTFVTNTREPSNIVLSAYLQANRDRNVADITDPAEMDKEIERYKQHVESYPVDALYRYHGASVPLTKCPHEWVHEDAMRAIAERYEVVIDLSRPEESTAMMETVTGLRPDFTGHYNERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQFNIIKDRLMQNRCFDEDSGGYTLCEKAVLKKEDITERSRQESYAARDAL 356

[Close]

BLAST of Gchil6320.t1 vs. uniprot
Match: A0A2V3IZP3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZP3_9FLOR)

HSP 1 Score: 361 bits (927), Expect = 1.460e-120
Identity = 180/280 (64.29%), Postives = 223/280 (79.64%), Query Frame = 0

Query:   82 YNRPPKTGSTTVRIAVKRALDEHGLTAAKCFNMIEWNEMGLKTIINRRDVDFYGCHTRMTRDRYDFVSRLRGGNVTFVTNTREPSNIILSAYLQENRDRKVADITDDKQMEEEIERFKKHVESYPVDALYRYHGA-DV-TLNQCPIEWVHEDAMRRVAERYEVVIDLSRPEESTAMMEAVTGLRPDFTGHFNERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQYNIIKDRLMQNRCFDEGSGSFSLCEKAVLKKEEISEKNRKESYAAREALVQM 359
            YNRPPKTGST+VRIA+K AL++  + AAKCFNMIEWNEM L+TIINRR+VDFYGCHTR+  DR+  +S++RGGNVTF+T+TRE S+I+LSAYLQ+ RDR+VADIT  K+M+EEI R+KK VE YPVDALY YHGA D+  L+ CP+ W H  AMRR+AERYE+V+DL + +ES  M+EAVTGL+PD    +NERT   S  ML  L  IDTSHKTCGNELVH+VL  Q+N+IKDRLMQNRCFDEGS S  LC++  L  + I+E+ R ES  AR+AL ++
Sbjct:   74 YNRPPKTGSTSVRIAMKNALNKDNMVAAKCFNMIEWNEMALRTIINRRNVDFYGCHTRLVPDRFRDISQMRGGNVTFMTSTREASDIVLSAYLQDQRDRRVADITGKKEMDEEIARYKKFVEKYPVDALYAYHGAGDIHKLSSCPVSWQHTLAMRRIAERYEIVVDLEKADESAVMVEAVTGLKPDLNLFYNERTKQKS-PMLDKLGAIDTSHKTCGNELVHEVLTMQFNVIKDRLMQNRCFDEGSASAHLCDRIKLTADSIAERGRLESMKARDALKKL 352

The following BLAST results are available for this feature:

BLAST of Gchil6320.t1 vs. uniprot

BLAST of Gchil6320.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J175_9FLOR	2.610e-200	80.06	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IZP3_9FLOR	1.460e-120	64.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 74..341 e-value: 1.5E-11 score: 46.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 76..234
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..367
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 29..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..32
None	No IPR available	TMHMM	TMhelix		coord: 12..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000196_pilon	contig	tig00000196_pilon:104210..105313 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6320.t1	Gchil6320.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000196_pilon 104210..105313 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6320.t1 ID=Gchil6320.t1|Name=Gchil6320.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=368bp
MKANGAKKEMRMLVLVALAAITSSVSLFYALSRPALDVGRLESRLRLIEQ
YARAGADVPPPPAPIVTAIGGGSSDQKRLLFYNRPPKTGSTTVRIAVKRA
LDEHGLTAAKCFNMIEWNEMGLKTIINRRDVDFYGCHTRMTRDRYDFVSR
LRGGNVTFVTNTREPSNIILSAYLQENRDRKVADITDDKQMEEEIERFKK
HVESYPVDALYRYHGADVTLNQCPIEWVHEDAMRRVAERYEVVIDLSRPE
ESTAMMEAVTGLRPDFTGHFNERTTDTSGKMLTALKNIDTSHKTCGNELV
HKVLMQQYNIIKDRLMQNRCFDEGSGSFSLCEKAVLKKEEISEKNRKESY
AAREALVQMAGGEHPSD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase