Gchil6317.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6317.t1
Unique NameGchil6317.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length239
Homology
BLAST of Gchil6317.t1 vs. uniprot
Match: A0A2V3J2S5_9FLOR (Dr1-associated corepressor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2S5_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 4.210e-40
Identity = 87/148 (58.78%), Postives = 98/148 (66.22%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPPIRRRRRTRHTSAATPNSSSDTPSFPFNKRPRSPASSSSSDHHQPKTHRT 148
            MGRRKGTSAFPVARIKKMMQ+D++VGKIAT TPVLVAKALECMME VLHEAA  A SR + T+ PQHLK  VMRN+SFDFLR +F  V+   +     P  RRRR    S   P      P+   NKRPRS         H PKT R+
Sbjct:    1 MGRRKGTSAFPVARIKKMMQADEEVGKIATATPVLVAKALECMMEYVLHEAAQEARSRSTTTLTPQHLKLAVMRNDSFDFLRPLFSAVDLRTDDNHASPRPRRRR----SQIAP------PAHALNKRPRSXXXXXXXPSHLPKTPRS 138          
BLAST of Gchil6317.t1 vs. uniprot
Match: R7QK66_CHOCR (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK66_CHOCR)

HSP 1 Score: 142 bits (359), Expect = 5.650e-39
Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQ-EGASDPPIRRRRRTRHTSAA 112
            MGRRKGTSAFPVARIKKMMQSD++VGKIATVTPVLVAKALECMME+VL EAAD+A  RH+ T+ P HLK CV RN++FDFLR + + V   + + A  P  RR  R    SAA
Sbjct:    1 MGRRKGTSAFPVARIKKMMQSDEEVGKIATVTPVLVAKALECMMEDVLREAADVARERHTRTVTPLHLKTCVARNDAFDFLRPIVRHVSGDEGKRARSPADRRAARAEAGSAA 113          
BLAST of Gchil6317.t1 vs. uniprot
Match: A0A7S0XJ73_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJ73_9RHOD)

HSP 1 Score: 105 bits (263), Expect = 6.570e-24
Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPP 99
            MG+++ + AFPVARIKKMMQSD+DVGKIAT  P+LVAKALE ++E+++  AA +A    + TI PQHLK  V +NE+FDFL ++F+ V  P      PP
Sbjct:    1 MGKKRASVAFPVARIKKMMQSDEDVGKIATGAPLLVAKALEVVLEDLIRSAAGVATQCKARTISPQHLKQTVFQNEAFDFLHNIFEHV--PALDQQPPP 97          
BLAST of Gchil6317.t1 vs. uniprot
Match: A0A7S1T9N3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9N3_9RHOD)

HSP 1 Score: 99.8 bits (247), Expect = 3.680e-23
Identity = 45/82 (54.88%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLR 82
            MGRR+G + FP+ARIKKMMQSD++VGKIAT  P+L++KALE M+E+++ ++A +A +R + T+ P+H K C+MR   FDFL+
Sbjct:    1 MGRRRGGTVFPLARIKKMMQSDEEVGKIATGAPLLLSKALELMLEDLVTQSAMVAKARGAQTVAPRHFKECIMRENLFDFLK 82          
BLAST of Gchil6317.t1 vs. uniprot
Match: A0A1X6PFB2_PORUM (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFB2_PORUM)

HSP 1 Score: 104 bits (259), Expect = 5.980e-22
Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    1 MGRRKG-TSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPPI 100
            MGRRK  T+AFP +RIKKMMQ+D+DVGK+AT TP+LV KALE ++++++ +AA +A  R + T+ P HLK+ V  +++FDFL+ +F+RV   +   S PP+
Sbjct:    1 MGRRKSSTAAFPPSRIKKMMQADEDVGKVATATPILVGKALEMLLQDLITQAAGVASGRRAKTLTPAHLKSTVHADDTFDFLKSIFERVPDLE---SKPPV 98          
BLAST of Gchil6317.t1 vs. uniprot
Match: A0A3G2SB19_9BASI (DNA polymerase epsilon subunit C n=2 Tax=Malassezia restricta TaxID=76775 RepID=A0A3G2SB19_9BASI)

HSP 1 Score: 94.0 bits (232), Expect = 8.160e-20
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPPIRRRRRTRHTSAATP 114
            M RR  +S FP+ARIK++MQ+D+DVGK+A  TPV+++KALE  +++++  A +         + P HLK   +  E+FDFLR + ++V  P E A+    +RR+  + T+   P
Sbjct:    1 MVRRSASSKFPIARIKRIMQADEDVGKVAQATPVVISKALELFIQDIVETAVEQTRKTGGKRVAPYHLKRAALMTETFDFLRDILEKVPDPLESATPRGTKRRKTAKATTEEDP 114          
BLAST of Gchil6317.t1 vs. uniprot
Match: A0A2N1JB34_9BASI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1JB34_9BASI)

HSP 1 Score: 90.9 bits (224), Expect = 1.710e-19
Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPPIRRRRRTRHTSAATP 114
            M RR   S FP+ARIK++MQ+D+DVGK+A  TPV+++KALE  M+N++  A           + P HLK  V  NE+FDFL+ +  +V  P E       +RR+  +   A  P
Sbjct:    1 MVRRGVASKFPIARIKRIMQADEDVGKVAQATPVVISKALELFMQNIVESAVGQTRKSGGKRVAPYHLKRAVQANETFDFLKDIVDKVVDPLENGGTSTRKRRKVAKAEPAEEP 114          
BLAST of Gchil6317.t1 vs. uniprot
Match: A8PXN7_MALGO (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8PXN7_MALGO)

HSP 1 Score: 91.3 bits (225), Expect = 1.890e-19
Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPPIRRRR 104
            M +R   S FP+ARIK++MQ+D+DVGK+A  TPV+++KALE  M++++  AA+         + P HLK   +  E+FDFL+ + ++V  P E       +RR+
Sbjct:    1 MAKRSAASKFPIARIKRIMQADEDVGKVAQATPVVISKALELFMQDIVESAAEQTRKTGGKRVAPYHLKRAALTTETFDFLKDIVEKVPDPLEAGHSRGTKRRK 104          
BLAST of Gchil6317.t1 vs. uniprot
Match: A0A0M8MNX7_9BASI (Dna polymerase epsilon subunit dpb3 n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0M8MNX7_9BASI)

HSP 1 Score: 88.6 bits (218), Expect = 8.120e-19
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPPIRRRRRTRHTSAATPNSSSD 119
            M +R  TS FP+ARIK++MQ+D+DVGK+A  TPV+++KALE  M++++  A +         + P HLK   +  E+FDFL+ + ++V  P E        +RR+      A   S+ D
Sbjct:    1 MVKRSATSKFPIARIKRIMQADEDVGKVAQATPVVISKALELFMQDIVASAVEQTRKTGGKRVAPYHLKRAALTIETFDFLKDIVEKVADPLESGGAARSTKRRKVAKAEEADEASADD 119          
BLAST of Gchil6317.t1 vs. uniprot
Match: M5EPQ6_MALS4 (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=M5EPQ6_MALS4)

HSP 1 Score: 89.0 bits (219), Expect = 1.270e-18
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    1 MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHEAADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQE--GASDPP 99
            M +R  TS FP+ARIK++MQ+D+DVGK+A  TPV+++KALE  M++++ +AA+   S     + P HLK      E FDFL+ +  +V  P E  GA   P
Sbjct:    1 MVKRSTTSKFPIARIKRIMQADEDVGKVAQATPVVISKALELFMQDIVEKAAEQTRSTGGKRVSPYHLKRAAQATEMFDFLKDIVDKVPDPLESGGARTEP 101          
The following BLAST results are available for this feature:
BLAST of Gchil6317.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2S5_9FLOR4.210e-4058.78Dr1-associated corepressor n=1 Tax=Gracilariopsis ... [more]
R7QK66_CHOCR5.650e-3966.37CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ch... [more]
A0A7S0XJ73_9RHOD6.570e-2454.55Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S1T9N3_9RHOD3.680e-2354.88Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A1X6PFB2_PORUM5.980e-2250.50CBFD_NFYB_HMF domain-containing protein n=1 Tax=Po... [more]
A0A3G2SB19_9BASI8.160e-2038.60DNA polymerase epsilon subunit C n=2 Tax=Malassezi... [more]
A0A2N1JB34_9BASI1.710e-1940.35CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ma... [more]
A8PXN7_MALGO1.890e-1939.42CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ma... [more]
A0A0M8MNX7_9BASI8.120e-1936.97Dna polymerase epsilon subunit dpb3 n=1 Tax=Malass... [more]
M5EPQ6_MALS41.270e-1843.56CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ma... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..87
e-value: 2.4E-23
score: 84.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 6..89
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 10..72
e-value: 3.8E-15
score: 55.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..198
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 7..150
IPR027116Negative cofactor 2 complex subunit alpha/DNA polymerase epsilon subunit CPANTHERPTHR10252:SF5DR1-ASSOCIATED COREPRESSORcoord: 7..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:95429..96145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6317.t1Gchil6317.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 95429..96145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6317.t1 ID=Gchil6317.t1|Name=Gchil6317.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=239bp
MGRRKGTSAFPVARIKKMMQSDDDVGKIATVTPVLVAKALECMMENVLHE
AADIAHSRHSNTILPQHLKACVMRNESFDFLRHVFKRVETPQEGASDPPI
RRRRRTRHTSAATPNSSSDTPSFPFNKRPRSPASSSSSDHHQPKTHRTET
STDPRSPSTLPRLPKPFPQALPQPPIPSSAPLDDDDDDYDEDDQDQPEPT
IIEQSNSVPPPSEDAAAAAIEINPKRTADRVSVQALVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain
IPR027116Bur6/Dpb3