Gchil6313.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6313.t1
Unique NameGchil6313.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length296
Homology
BLAST of Gchil6313.t1 vs. uniprot
Match: A0A2V3J4P6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P6_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 3.070e-39
Identity = 93/244 (38.11%), Postives = 132/244 (54.10%), Query Frame = 0
Query:   51 CIVYDRPPRTGSTTIGRALELCLRSAGYVQQPLPKGKKGGERRAGAIRQMLAADRKEDRRALLTRHIYVSEADMQLIRWTCDDFLYITSTAPMKERLWSAAKHLLARRHGNTTSEWLNKARAAQVVRRQAFKVGELRSVNELNWYPYLTAGGEEAAVKRKLI----ADYVIRKASLQQDLGRLLEAFGCDASFTTRNVHEDDDVTNLDMVIGNAGLAEGDRLYKALWARAEQANEDTLEMAKTF 290
            C++YDRPPRT STTIG ALE CL   GY +QP  +G  G   R+  +  ML      +R +LL RH Y++   +  +R  CD   YITSTAPMKERLWS  K+    +HGN++        A Q +R++  ++        LN YPYL     E  + R  I     DYVIRK+ L +D+ +LL AFGC+  F + N+H  +  + LD +     + + D L++ +   A Q N+  L+ A  F
Sbjct:   58 CVIYDRPPRTASTTIGNALEKCLEPLGY-EQPDWQGMDG---RSLMVLNMLRLP--FERVSLLARHFYMNSTSLLELRTGCDALFYITSTAPMKERLWSLVKYRQVTKHGNSSLNETQLFAALQDLRKETVQI------EVLNAYPYLQT--HETPINRSTIDTITPDYVIRKSQLNEDMSKLLRAFGCETRFVSENIHLLEHASGLDKIT----IDDDDGLHERMLRLARQRNDVGLKKAADF 283          
BLAST of Gchil6313.t1 vs. uniprot
Match: A0A2V3J1M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M7_9FLOR)

HSP 1 Score: 139 bits (350), Expect = 5.980e-36
Identity = 92/248 (37.10%), Postives = 128/248 (51.61%), Query Frame = 0
Query:   46 TERTKCIVYDRPPRTGSTTIGRALELCLRSAGYVQQPLPKGKKGGERRAGAIRQMLAADRKEDRRALLTRHIYVSEADMQLIRWTCDDFLYITSTAPMKERLWSAAKHLLARRHGNTTSEWLNKARAAQVVRRQAFKVGELRSVNELNWYPYLTAGGEEAAVKRKLIADYVIRKASLQQDLGRLLEAFGCDASFTTRNVHED--DDVTNLDMVIGNAGLAEGDRLYKALWARAEQANEDTLEMAKTFV 291
            T   +C +YDRPPRT STTIG AL+ CLR   + Q P        E++  AI   +  + +  R+ALL+RH Y++   + L+R  C    YITS AP++ERL SA+K+ L+  HGN+T +      AA+            R    LN YPY+    +   V   L+ +YVIRK  L+QDL +LL+   CD SF + NVH    D+   L  +      A  D LY+ L  RA   N   L+  K F+
Sbjct:   44 TPSIRCFIYDRPPRTASTTIGTALQSCLRRHHFRQPPR-------EKQRSAIPYTIFDNLQTPRKALLSRHFYLNSRTVSLLRKRCSTLFYITSCAPIEERLLSASKYTLSGGHGNSTLDDQQMHAAAEKANSST------RQKRFLNHYPYVDDDKKPINVSTPLVPNYVIRKPHLRQDLTKLLQTLQCDTSFVSGNVHRAPADESQILQHI-----TAGDDTLYQTLARRALSHNALGLQQLKQFI 273          
The following BLAST results are available for this feature:
BLAST of Gchil6313.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4P6_9FLOR3.070e-3938.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1M7_9FLOR5.980e-3637.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:82916..83803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6313.t1Gchil6313.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 82916..83803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6313.t1 ID=Gchil6313.t1|Name=Gchil6313.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=296bp
MKAKQFALAAVLMVCTACMLYARQAHTQDGDAGVRRRVQQVVTETTERTK
CIVYDRPPRTGSTTIGRALELCLRSAGYVQQPLPKGKKGGERRAGAIRQM
LAADRKEDRRALLTRHIYVSEADMQLIRWTCDDFLYITSTAPMKERLWSA
AKHLLARRHGNTTSEWLNKARAAQVVRRQAFKVGELRSVNELNWYPYLTA
GGEEAAVKRKLIADYVIRKASLQQDLGRLLEAFGCDASFTTRNVHEDDDV
TNLDMVIGNAGLAEGDRLYKALWARAEQANEDTLEMAKTFVLDDA*
back to top