Gchil6312.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6312.t1
Unique NameGchil6312.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length184
Homology
The following BLAST results are available for this feature:
BLAST of Gchil6312.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..24
NoneNo IPR availableTMHMMTMhelixcoord: 157..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:80107..80658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6312.t1Gchil6312.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 80107..80658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6312.t1 ID=Gchil6312.t1|Name=Gchil6312.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=184bp
MAVPASVPAATIVAAQPVAKRARAAPMPSPRSVRGAHLYASPSAASRPPC
HPPCRRPPCASPTSSLPLALPLALPPLRALDMSRCAPRYSPSQLRRALHR
LSAANTSGSHASLHVSTSSVAAAAAAAAALPQHVVIALEPAAAAILPPGK
LRAAVRWSWPLSLLLLLLVVLAAVYTFAPRLFP*
back to top