Gchil6308.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6308.t1
Unique Name	Gchil6308.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	423

Homology

[Close]

BLAST of Gchil6308.t1 vs. uniprot
Match: R7QDL8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDL8_CHOCR)

HSP 1 Score: 214 bits (545), Expect = 4.120e-61
Identity = 171/442 (38.69%), Postives = 225/442 (50.90%), Query Frame = 0

Query:   45 VPRGRSYHGKPLSAAAQAAQQGYFARKAAKMYAERKKAAATGSATAIAPADSQPIAEPDMTGALKPANHNENPVEVINITVDAEGVKIDENKPRVSAMGSRTNSRARMTRSSSRQRNLHPRADDKENLITDA----RLDAHIEAYFNRKRVAVVGAPITQPTDTRPDDQSTTSNHSWDGSMPKRRNSRSVIQRDHAISQRVSPSLN----------AKPSSTALSPRQAMLSPATLG--------------------QACNLKVSTNDNVNDQ-------------------------------------------MSAPFDQAQDGTHTSADVANEETSDASCNSQLPNNGKWCDECAGVGLHISALLSELQTQRPVPEAGAADAGASSGSGAKKGWKSMVTQTVLGESKSKSS-EKAKLQQEINVLRATVDFLYKKIERL 408
            +PRGRS+HG      AQAAQ G+  R AAKM AE+KK A        A +D Q +   D+       +    P +VINITVDA+GV ID  K     MG R+NSR+RMTRS+S+ RN   RADDKEN+  D      ++A + AYF RKR   +     +  DT  D+ S     SWDGSMPKR++SRS I  D  +  + S + N          A PS T ++ R        L                      A +L  +  +N +D+                                           M+A  +    G H+   V  EE  D +   ++P +GKWCD+CAG+GLHI+ALLS+L   R   ++  +  G+SS   +KKGWKSMVTQT+LG+SKSKSS EKA+LQQEINVL+ATVDFLYKK+E L
Sbjct:   43 MPRGRSFHGSRNLTPAQAAQDGFHHRLAAKMLAEKKKKAVA------AQSDRQALDTRDV-------DKEAEPTDVINITVDAKGVMIDSAKGTTQGMGGRSNSRSRMTRSTSKSRNSFRRADDKENITADVPSFKAVEADVAAYFGRKRSVDLSR---RKRDTENDNLS-----SWDGSMPKRQSSRSFI--DRKVGTKTSATQNGEAEARVMSLAPPSDTDVNDRPRRRRSQKLAALKKSLEEEGTKIEALKQQFSAVDLNGTYQNNPSDEDITGKQNSQTTIRADARLEAQANTPLSGIRSLQAGGCVKIRREMNAGNEAISRGVHS---VRAEECPDRN-GREVPASGKWCDDCAGLGLHIAALLSQLDKARSTTDS--SSEGSSSSCNSKKGWKSMVTQTMLGDSKSKSSTEKARLQQEINVLKATVDFLYKKVETL 455

The following BLAST results are available for this feature:

BLAST of Gchil6308.t1 vs. uniprot

BLAST of Gchil6308.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QDL8_CHOCR	4.120e-61	38.69	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 384..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..385

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000196_pilon	contig	tig00000196_pilon:70249..71517 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6308.t1	Gchil6308.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000196_pilon 70249..71517 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6308.t1 ID=Gchil6308.t1|Name=Gchil6308.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=423bp
MPRAPASAPSPSPSPLPTPSRSRSSRKLPRPGTFSHAGLPRTPSVPRGRS
YHGKPLSAAAQAAQQGYFARKAAKMYAERKKAAATGSATAIAPADSQPIA
EPDMTGALKPANHNENPVEVINITVDAEGVKIDENKPRVSAMGSRTNSRA
RMTRSSSRQRNLHPRADDKENLITDARLDAHIEAYFNRKRVAVVGAPITQ
PTDTRPDDQSTTSNHSWDGSMPKRRNSRSVIQRDHAISQRVSPSLNAKPS
STALSPRQAMLSPATLGQACNLKVSTNDNVNDQMSAPFDQAQDGTHTSAD
VANEETSDASCNSQLPNNGKWCDECAGVGLHISALLSELQTQRPVPEAGA
ADAGASSGSGAKKGWKSMVTQTVLGESKSKSSEKAKLQQEINVLRATVDF
LYKKIERLETTDSTSATSASSR*