Gchil6294.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6294.t1
Unique NameGchil6294.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length119
Homology
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BLAST of Gchil6294.t1 vs. uniprot
Match: A0A2V3IZT9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZT9_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 2.960e-31
Identity = 63/107 (58.88%), Postives = 78/107 (72.90%), Query Frame = 0 
Query:    1 MNLSRNEKAVVFGVSVVGVGVAVSAVLTEYLERSKTSSEPKE--QEYFYLKSIASKEELMKVCADGYAVYKQPLSKIMKFVGQMFVAPIALKALDAVYNAYCDNASS 105
            M LS  EKAVV GVS+VG+GVA SA L EY +   T+ E  E  ++ F ++  ASKEEL+K CADGY V KQPLSK+++ VGQM VAPIALK LDA YNAY + ++S
Sbjct:    1 MKLSTTEKAVVIGVSLVGMGVAASAALIEYFDIPTTTPESTETKEKVFEIRVPASKEELIKTCADGYLVVKQPLSKVIRIVGQMLVAPIALKVLDAAYNAYSEKSNS 107
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BLAST of Gchil6294.t1 vs. uniprot
Match: R7QFQ8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFQ8_CHOCR)

HSP 1 Score: 62.4 bits (150), Expect = 4.270e-10
Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 0 
Query:    3 LSRNEKAVVFGVSVVGVGVAVSAVL-----------TEYLERSKTSSEPKEQEYFYLKSI-ASKEELMKVCADGYAVYKQPLSKIMKFVGQMFVAPIALKALDAVYNAYCDNASSCL 107
            +S  +KAV+  ++V GVGVA+SA +           TE  E S  S+   +Q +  ++ +   K EL+   AD Y   +  L K  +  GQMFVAP+AL  LDA+Y  Y D    CL
Sbjct:    1 MSLTDKAVMATLAVSGVGVAMSAAVVRLREARDWEATEEKEESTVSTATCDQLWVKVRHLLGGKSELLDAWADHYVGSRNILEKSFRIFGQMFVAPVALVVLDALYERYFDGQMPCL 117
The following BLAST results are available for this feature:
BLAST of Gchil6294.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IZT9_9FLOR2.960e-3158.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QFQ8_CHOCR4.270e-1036.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:620..1203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6294.t1Gchil6294.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 620..1203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6294.t1 ID=Gchil6294.t1|Name=Gchil6294.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=119bp
MNLSRNEKAVVFGVSVVGVGVAVSAVLTEYLERSKTSSEPKEQEYFYLKS
IASKEELMKVCADGYAVYKQPLSKIMKFVGQMFVAPIALKALDAVYNAYC
DNASSCLALEQPSLSKVD*
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