Gchil6255.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6255.t1
Unique NameGchil6255.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length139
Homology
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BLAST of Gchil6255.t1 vs. uniprot
Match: A0A1X6NUD7_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUD7_PORUM)

HSP 1 Score: 90.5 bits (223), Expect = 1.180e-18
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 0 
Query:   53 GGFGKQSKSDPADSSQKQLKKLKTMRNRLISCSTCSGSGVKPCQFCQGTKLMVGFLGKRVPCVPCKQKGTLGRPCKDCSGMGFLQ 137
            GGFG    +         ++       +L  C  C+G+G+K C FC+G  +MVG+LG  VPCVPC+QKGT+GRPC DC GMGF Q
Sbjct:  337 GGFGSPPPASRGVLPTDGVRSGSKGSGKLRPCEPCAGTGLKRCAFCRGGGVMVGYLGAAVPCVPCEQKGTMGRPCPDCGGMGFFQ 421
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BLAST of Gchil6255.t1 vs. uniprot
Match: M1VFX7_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VFX7_CYAM1)

HSP 1 Score: 71.2 bits (173), Expect = 1.090e-12
Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 0 
Query:   41 PLLLSGIHVLAAGGFGKQSKSDPADSSQKQL--KKLKTMRNRLISCSTCSGSGVKPCQFCQGTKLMVGFLGKRVPCVPCKQKGTLGRPCKDCSGMGFL 136
            P  LS   V  A  F   S +DPA ++ +Q   ++L+     +I C  C G     C  C G+  M GFLG  VPC PC+  G LGRPC++C+GMGF 
Sbjct:   86 PGYLSPEEVREAIRFLVNSAADPAAATLRQRLRRQLRKQYGPVIQCGACHGKRRSVCLMCNGSCKMKGFLGDEVPCYPCQGTG-LGRPCRECNGMGFF 182
The following BLAST results are available for this feature:
BLAST of Gchil6255.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1X6NUD7_PORUM1.180e-1847.06Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
M1VFX7_CYAM11.090e-1240.82Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..138
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 75..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004388_piloncontigtig00004388_pilon:177031..177447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6255.t1Gchil6255.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004388_pilon 177031..177447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6255.t1 ID=Gchil6255.t1|Name=Gchil6255.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=139bp
MPRRFDSSSRTFVALRFAFPIAGSSKMLNPTLVQSPCSALPLLLSGIHVL
AAGGFGKQSKSDPADSSQKQLKKLKTMRNRLISCSTCSGSGVKPCQFCQG
TKLMVGFLGKRVPCVPCKQKGTLGRPCKDCSGMGFLQF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf