Gchil6251.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6251.t1
Unique NameGchil6251.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length228
Homology
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A2V3IY36_9FLOR (Golgi reassembly-stacking protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY36_9FLOR)

HSP 1 Score: 375 bits (962), Expect = 3.730e-130
Identity = 186/227 (81.94%), Postives = 205/227 (90.31%), Query Frame = 0
Query:    1 MGQEYSTEDGNGSPSVDGSQGAFIEGETSFDSLSGYRVMKVFQGSPASRSGLSPYEDFVVALNGRLVNADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHISRST 227
            MGQEYS EDG+G+   +G+     +    FDSLSGYRVMKVFQGSPASRSGL+PYEDF+VALN  LV+ADNASLANVLRENEG EVAL+VWNCID+K+R+V+LRPVKWNGPGLLGAAVRFE LRGA+D+VQRV+DVLPNSPADEAGLVP TDYIVGTPAEAFR E  FNKLISDALQRQTAASVM++SSATNRTRNIEIRPNKDWGGEGSLGC+LATGLLH ISRST
Sbjct:    1 MGQEYSHEDGDGTTGGNGTGAENSQSAVDFDSLSGYRVMKVFQGSPASRSGLAPYEDFIVALNRNLVDADNASLANVLRENEGNEVALVVWNCIDAKERNVALRPVKWNGPGLLGAAVRFEPLRGASDYVQRVVDVLPNSPADEAGLVPFTDYIVGTPAEAFRTEGAFNKLISDALQRQTAASVMVYSSATNRTRNIEIRPNKDWGGEGSLGCQLATGLLHRISRST 227          
BLAST of Gchil6251.t1 vs. uniprot
Match: R7Q8P7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8P7_CHOCR)

HSP 1 Score: 335 bits (858), Expect = 2.670e-114
Identity = 164/226 (72.57%), Postives = 190/226 (84.07%), Query Frame = 0
Query:    1 MGQEYSTEDGNGSPSVDGSQGAFIEGETSFDSLSGYRVMKVFQGSPASRSGLSPYEDFVVALNGRLVNADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHISRS 226
            MGQE S +DG  + S                +LSGYR MKVFQGSPASRSGL+P+EDF+VA+NG +V+ADNASLA VLR+NEGKE+AL+VWNC+D+ KRDV+LRPVKWNGPGLLGAAVR+E L GAADHVQRV+DVLP SPADEAGLVP TDYIVGTPAE FRKEADF+ LI +ALQR +AAS M++SSATNR RN+EIRP+KDWGGEGS+GCELATGLLH I+RS
Sbjct:    1 MGQEQSVDDGEANTSGPSXXXXXXXXXXXXTTLSGYRAMKVFQGSPASRSGLAPFEDFIVAVNGAVVDADNASLAAVLRDNEGKELALVVWNCVDNAKRDVALRPVKWNGPGLLGAAVRYEPLAGAADHVQRVVDVLPESPADEAGLVPNTDYIVGTPAEVFRKEADFSTLIVEALQRHSAASFMVYSSATNRVRNVEIRPDKDWGGEGSIGCELATGLLHRITRS 226          
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A7S2ZKR3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKR3_9RHOD)

HSP 1 Score: 230 bits (587), Expect = 4.150e-73
Identity = 108/191 (56.54%), Postives = 142/191 (74.35%), Query Frame = 0
Query:   33 LSGYRVMKVFQGSPASRSGLSPYEDFVVALNGRLVNADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHI 223
            +SGYRVM+VFQGSPA RSGLSP+EDF+VA+NG + +  +  L NVL  +E  EV ++VWNCID + R V + P KW+GPGLLGAAV+F+ L  A+ ++  VID+ P SPAD+AGL P  DYIVGTPA  F+KE D N L  +A ++Q   ++ ++SSAT R R +E++P+  WGG+G LGCELATGLLH I
Sbjct:   21 ISGYRVMRVFQGSPAWRSGLSPFEDFIVAVNGEVCDDQSNPLGNVLNGHENMEVDVLVWNCIDEQGRHVKMTPSKWSGPGLLGAAVKFDKLDPASTYLWHVIDLAPRSPADDAGLTPDKDYIVGTPANVFKKETDLNNLAKEAARKQEYLTLCIYSSATGRLREVELKPSDSWGGKGLLGCELATGLLHKI 211          
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A5J4Z8A4_PORPP (Golgi reassembly-stacking protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8A4_PORPP)

HSP 1 Score: 187 bits (476), Expect = 2.180e-54
Identity = 93/190 (48.95%), Postives = 128/190 (67.37%), Query Frame = 0
Query:   35 GYRVMKVFQGSPASRSGLSPYEDFVVALNGRLVNADNA-SLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHI 223
            GYRVMKVF+GSPA+ +GL  +ED+V A+ G+LV   +A SLA++L   E ++V L VW+ +    R VSL P  W GPGLLGAAV++E +     HV  V +V PNSP  +AGL+P +DY+VGT ++ FR E D   L+  A  +    +++++SSAT R R++E+ PN  WGG G LGCEL+TGL H I
Sbjct:   66 GYRVMKVFEGSPAADAGLLMFEDYVFAVGGKLVQEPDAGSLADLLAAAENEQVQLSVWSSVHRVVRFVSLVPRAWKGPGLLGAAVKYEPMSDPFPHVMHVTNVAPNSPGADAGLMPKSDYLVGTRSDVFRNERDLEILLRQAHSQNAILALVVYSSATGRFRSVEVSPNNHWGGRGILGCELSTGLFHEI 255          
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A7S1XH82_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XH82_9RHOD)

HSP 1 Score: 187 bits (474), Expect = 3.930e-54
Identity = 96/209 (45.93%), Postives = 134/209 (64.11%), Query Frame = 0
Query:   20 QGAFIEGET--SFDSLSGYRVMKVFQGSPASRSGLSPYEDFVVALNGRLVN---ADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHI 223
            +GA + GE   +   L G RVM+VF  SPASR+GL  +EDF+VA++  LV+    +N +LA+VL     ++V  IVWNC+   +R V+LRP +W GPG+LGAAVR   L GAA+HV  V+ V    PAD AGL    DYIVGTPA+AF  E D    +  A + +    +M++S+AT R R++ + P++ WGG G LGC++  GL+H I
Sbjct:    9 RGAVVSGEELEAIQQLHGLRVMRVFPSSPASRAGLRAFEDFIVAVDDTLVDELLTENRTLASVLAARLDQDVTCIVWNCLALTERSVALRPQRWAGPGVLGAAVRRGPLSGAAEHVWHVVGVAAGGPADLAGLSAGVDYIVGTPADAFGSERDLETAVRRAAREEEELELMVYSTATARVRDVVVAPSRHWGGPGLLGCDVMNGLMHRI 217          
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A1X6NMK1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMK1_PORUM)

HSP 1 Score: 184 bits (468), Expect = 6.160e-53
Identity = 101/231 (43.72%), Postives = 134/231 (58.01%), Query Frame = 0
Query:   29 SFDSLSGYRVMKVFQGSPASRSGLSPYEDFVVALNGRLV----------------------------------NADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHISR 225
            S +SLSG+RVMKVF GSPA+RSGL+P++DF++A++G L                                        SL  +L    G+ V+L+VW+CID  +R+V L P  + GPGLLGAAVR E L GA   V  V+DVLP SPADEAGL P  D++VGT A  FR+  DF ++++DA +      +M++S+AT R R +E+     WGG G LG E A GLLH I R
Sbjct:  170 STESLSGFRVMKVFAGSPAARSGLAPFDDFILAVDGVLAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLGALLSAARGRPVSLLVWSCIDGAEREVDLTPAPYAGPGLLGAAVRHEPLAGATAGVWHVLDVLPGSPADEAGLCPRDDWVVGTAACVFRQPRDFGRVVADAAEGGGVVGLMVYSAATGRVRGVEVELGGVWGGGGVLGAETANGLLHLIPR 400          
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A7S1XH94_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH94_9RHOD)

HSP 1 Score: 169 bits (429), Expect = 1.190e-48
Identity = 89/196 (45.41%), Postives = 125/196 (63.78%), Query Frame = 0
Query:   44 GSPASRSGLSPYEDFVV------ALNGRLVN------ADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHISRST 227
            GSPA+R+GL+P+EDF++      A  G          A +A +A  +  ++G+++AL VWN +D + R VSLRP +  GPGLLGAAVR E L+GA +    V+ V P SPA EAGL+P +DYI+GTP  AFR+  +F +L+++  +      + ++SSAT R R IE+ P +DWGG G +G ELA G LH I R T
Sbjct:   57 GSPAARAGLTPFEDFILLPQPGDAEPGETDEVPENDGAASAQMARWIEAHQGRDLALRVWNGVDREGRTVSLRPERSAGPGLLGAAVRLEPLKGACEGFWHVLHVQPTSPAAEAGLLPNSDYILGTPQHAFREPKEFMQLVTECHRNSAPTILAIYSSATGRHREIELTPRRDWGGRGLVGAELANGALHRIPRRT 252          
BLAST of Gchil6251.t1 vs. uniprot
Match: M2XDX5_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XDX5_GALSU)

HSP 1 Score: 166 bits (421), Expect = 4.690e-47
Identity = 90/209 (43.06%), Postives = 124/209 (59.33%), Query Frame = 0
Query:   23 FIEGETSFDSLSG---YRVMKVFQGSPASRSGLSPYEDFVVALNGRLVNADNASLANVLRENEGKEVALIVWNCIDSKKRDVSL---RPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHISR 225
            F E E   D L G   YR+MK+ +     R+GL  YEDF+VA++  +V  +   +   L+E  G++V L+VWNC+D ++R+V L   +P K    G LG  VR+E L  AA++   VI V+PNSPADE GL+P +DYIVGTP+ AFR      +L+ DA   Q    +M++S AT + R I + P     G   LGCELA GLLH + R
Sbjct:    8 FTESEVDSDELEGHYGYRIMKLLENGSGMRAGLRVYEDFIVAVDDLIVEEEEERIPEYLKEKTGQQVKLVVWNCLDEEEREVVLVVNKPTK--DMGYLGVIVRYESLFQAAEYSWHVISVVPNSPADEVGLMPQSDYIVGTPSVAFRSYDTLPQLVYDAAHLQNPLDLMVWSKATGKVRLISVEPEITEEGTPLLGCELAKGLLHQLPR 214          
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A813FSL3_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FSL3_POLGL)

HSP 1 Score: 160 bits (405), Expect = 1.340e-43
Identity = 76/197 (38.58%), Postives = 121/197 (61.42%), Query Frame = 0
Query:   27 ETSFDSLSGYRVMKVFQGSPASRSGLSPYEDFVVALNGRLVNADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHI 223
            ++S D + G+R+ KV  GSPAS +GL  + DF++ +NG  +++D    A  ++++EG+   L+V+N      RDV + P +W G GLLGA VRF+ L  A     RV+DV PNSPA+ AGL+P  D+++GT    FR   + +++++  L +    S+ +++      R + I P  DWGG+G+LG ++ TGLLH I
Sbjct:    5 QSSSDEIGGFRIFKVNPGSPASEAGLEVFFDFIIEINGTQMDSDQTVFAKCIQDSEGQRAKLVVYNLRTHTSRDVYVTPRRWGGAGLLGAVVRFDLLESAESQGMRVLDVFPNSPAESAGLLPYKDFLLGTTEVMFRDMDELSEVVTLCLGKPM--SIYVYNCEMETVREVSIVPRIDWGGDGALGADIRTGLLHRI 199          
BLAST of Gchil6251.t1 vs. uniprot
Match: A0A7S2CX27_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CX27_9DINO)

HSP 1 Score: 150 bits (379), Expect = 1.980e-41
Identity = 74/189 (39.15%), Postives = 115/189 (60.85%), Query Frame = 0
Query:   35 GYRVMKVFQGSPASRSGLSPYEDFVVALNGRLVNADNASLANVLRENEGKEVALIVWNCIDSKKRDVSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPLTDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIRPNKDWGGEGSLGCELATGLLHHI 223
            G+R+ KV  GSPA  +GL  + DF+V + G  +++D  +    ++E+E     +IV+N      RDV + P KW G GLLGA VR++ L  A +   RV++V PNSPA +AGL+P  D+++GT    FR   +  +++  +L ++T   V +++S T   R + I PN DWGG+G +G ++ TGLLH I
Sbjct:   18 GFRIFKVNPGSPAFEAGLEVFFDFIVDIGGTKMDSDQKTFFQKIQESENTRTKIIVYNIRTHSSRDVYVMPRKWGGAGLLGAVVRYDALDNAENQGIRVLNVFPNSPAKQAGLIPYKDFLLGTTEVMFRDLDELVEIVHLSLGKKT--QVYVYNSDTESIREVTIVPNLDWGGDGCIGADIRTGLLHRI 204          
The following BLAST results are available for this feature:
BLAST of Gchil6251.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY36_9FLOR3.730e-13081.94Golgi reassembly-stacking protein 1 n=1 Tax=Gracil... [more]
R7Q8P7_CHOCR2.670e-11472.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZKR3_9RHOD4.150e-7356.54Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z8A4_PORPP2.180e-5448.95Golgi reassembly-stacking protein 1 n=1 Tax=Porphy... [more]
A0A7S1XH82_9RHOD3.930e-5445.93Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A1X6NMK1_PORUM6.160e-5343.72Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1XH94_9RHOD1.190e-4845.41Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XDX5_GALSU4.690e-4743.06Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A813FSL3_POLGL1.340e-4338.58Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A7S2CX27_9DINO1.980e-4139.15Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 22..128
e-value: 4.8E-24
score: 86.7
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 129..227
e-value: 2.9E-23
score: 84.1
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 35..118
IPR024958GRASP-type PDZ domainPFAMPF04495GRASP55_65coord: 90..224
e-value: 1.1E-34
score: 119.8
IPR024958GRASP-type PDZ domainPROSITEPS51865PDZ_GRASPcoord: 129..220
score: 19.21273
IPR024958GRASP-type PDZ domainPROSITEPS51865PDZ_GRASPcoord: 34..123
score: 21.079021
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableCDDcd00136PDZcoord: 38..91
e-value: 6.77136E-6
score: 40.7517
IPR007583GRASP55/65PANTHERPTHR12893GOLGI REASSEMBLY STACKING PROTEIN GRASPcoord: 30..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004388_piloncontigtig00004388_pilon:124556..125415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6251.t1Gchil6251.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004388_pilon 124556..125415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6251.t1 ID=Gchil6251.t1|Name=Gchil6251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=228bp
MGQEYSTEDGNGSPSVDGSQGAFIEGETSFDSLSGYRVMKVFQGSPASRS
GLSPYEDFVVALNGRLVNADNASLANVLRENEGKEVALIVWNCIDSKKRD
VSLRPVKWNGPGLLGAAVRFEGLRGAADHVQRVIDVLPNSPADEAGLVPL
TDYIVGTPAEAFRKEADFNKLISDALQRQTAASVMMFSSATNRTRNIEIR
PNKDWGGEGSLGCELATGLLHHISRST*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR024958GRASP_PDZ
IPR007583GRASP55_65