Gchil6248.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6248.t1
Unique Name	Gchil6248.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	281

Homology

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BLAST of Gchil6248.t1 vs. uniprot
Match: A0A2V3J5K3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K3_9FLOR)

HSP 1 Score: 264 bits (674), Expect = 1.160e-84
Identity = 166/284 (58.45%), Postives = 200/284 (70.42%), Query Frame = 0

Query:    1 MVTNVETSGTLESPQQLSTVVVGPIPVS--SKXXXXXXXXXXXXXXXXSSGSASPLPSE--TQNDTLFSDTSPGATERWKHRVQSLRSSLSQAQSENRALSADLKAAMARANDAEQAEAAVNKGLVTARSVISHRDRSIAELNAVVSNQRADFRRLEEEKKKLDRRLLLLKTVSANLQEAREERDNAEKKLEDCHSNIVRLKKRLSHLQETIEAYEKELAVLGMKEKQVDKLQGQLQDLREEKHLAEQQAERRSLVIAGASALGGAVAGLAFCFLTRSKDETEQ 280
            MVT VET   LE  Q L      P  VS  +K                SSGSASP PSE  +Q D + S+T     E+WKHR QSLRSSL+Q Q+ENR LS DLKAA+ARANDAEQAEAAVNKGL++ARSVIS RDRSIAELNA+VSNQRAD RRLE+EKKKLDRRL+LLKTVSANLQEARE RD AEK+LE+ +SN  +L+K+++  +E IEA  K +  L M +KQV+KL  Q+ DL +EK L+EQ+A R  ++ A A A+GGAV  LA   L+R  DE +Q
Sbjct:    1 MVTKVETVSILEPTQDLENNPSTPSSVSGSTKRKKKRRNGQSGNTPDLSSGSASPAPSEAPSQEDLVHSETPARTMEQWKHRAQSLRSSLNQVQNENRVLSTDLKAAVARANDAEQAEAAVNKGLLSARSVISQRDRSIAELNAMVSNQRADLRRLEDEKKKLDRRLILLKTVSANLQEAREGRDAAEKRLEESNSNASQLRKKVAKAEERIEALNKHVEALDMTKKQVEKLHCQIHDLHDEKELSEQKATRNVVLAASAGAVGGAVVTLALSLLSRPNDEKDQ 284

The following BLAST results are available for this feature:

BLAST of Gchil6248.t1 vs. uniprot

BLAST of Gchil6248.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5K3_9FLOR	1.160e-84	58.45	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..113
None	No IPR available	COILS	Coil	Coil	coord: 135..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..69
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 272..280
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..250
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 251..271
None	No IPR available	SUPERFAMILY	57997	Tropomyosin	coord: 75..243
None	No IPR available	TMHMM	TMhelix		coord: 250..272

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004388_pilon	contig	tig00004388_pilon:53791..54633 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6248.t1	Gchil6248.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004388_pilon 53791..54633 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6248.t1 ID=Gchil6248.t1|Name=Gchil6248.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=281bp
MVTNVETSGTLESPQQLSTVVVGPIPVSSKKKKKRRNGTSGNNSENSSGS
ASPLPSETQNDTLFSDTSPGATERWKHRVQSLRSSLSQAQSENRALSADL
KAAMARANDAEQAEAAVNKGLVTARSVISHRDRSIAELNAVVSNQRADFR
RLEEEKKKLDRRLLLLKTVSANLQEAREERDNAEKKLEDCHSNIVRLKKR
LSHLQETIEAYEKELAVLGMKEKQVDKLQGQLQDLREEKHLAEQQAERRS
LVIAGASALGGAVAGLAFCFLTRSKDETEQ*