Gchil621.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil621.t1
Unique Name	Gchil621.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	148

Homology

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BLAST of Gchil621.t1 vs. uniprot
Match: R7QFT3_CHOCR (Uncharacterized protein n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QFT3_CHOCR)

HSP 1 Score: 266 bits (680), Expect = 9.050e-90
Identity = 134/146 (91.78%), Postives = 139/146 (95.21%), Query Frame = 0

Query:    2 AITKGKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            A +  KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEP+LILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGL+AYYQK+VDE  K+ELK  LLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    3 AASTAKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPMLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLIAYYQKFVDEATKKELKDTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 148

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BLAST of Gchil621.t1 vs. uniprot
Match: M2VVH0_GALSU (40S ribosomal protein S16e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVH0_GALSU)

HSP 1 Score: 237 bits (604), Expect = 3.260e-78
Identity = 114/145 (78.62%), Postives = 133/145 (91.72%), Query Frame = 0

Query:    3 ITKGKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            + K KN VQVFGRKKTAVAVA +TG+GKGL+++NG PL+L+EPE LR+KV EP+LILGQ++FAD+DIRL+VKGGG T+QIYAIRQAIAKG+VAYYQK+VDE  KRELK  L++YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    2 VAKTKNMVQVFGRKKTAVAVATVTGSGKGLIRVNGVPLELVEPETLRIKVFEPILILGQDKFADLDIRLKVKGGGRTSQIYAIRQAIAKGIVAYYQKFVDEALKRELKDTLISYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 146

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BLAST of Gchil621.t1 vs. uniprot
Match: A0A1X6PKD2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKD2_PORUM)

HSP 1 Score: 236 bits (603), Expect = 4.330e-78
Identity = 114/142 (80.28%), Postives = 132/142 (92.96%), Query Frame = 0

Query:    6 GKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            GKNSVQVFGRKKTAVAVA I G+GKG+MK+NG P++LLEPE LRVKV EP+L+LG ERFA +D+R+RV+GGGYT+QIYAIRQAIAKG+VAYYQKYVDEV K+E+K +LL+YDR+LLVADPRRCEPKKFGG GARARFQKSYR
Sbjct:    3 GKNSVQVFGRKKTAVAVALIKGDGKGMMKVNGCPIELLEPEILRVKVFEPLLLLGPERFAGVDVRIRVRGGGYTSQIYAIRQAIAKGIVAYYQKYVDEVTKKEIKDLLLSYDRSLLVADPRRCEPKKFGGHGARARFQKSYR 144

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BLAST of Gchil621.t1 vs. uniprot
Match: A0A6T6PN43_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6PN43_9RHOD)

HSP 1 Score: 231 bits (589), Expect = 6.090e-76
Identity = 110/141 (78.01%), Postives = 129/141 (91.49%), Query Frame = 0

Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            +NSVQVFGRKKTAVAVA + GNGKGL+K+NG PLDLLEPE LRVK LEP+LILGQERF D+DIR+RVKG G+T+Q+YAIRQAIAKG+ AYY KYVDE  +++L+ +L++YDR+LLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    5 RNSVQVFGRKKTAVAVALVQGNGKGLVKVNGCPLDLLEPEVLRVKALEPILILGQERFVDLDIRIRVKGSGFTSQVYAIRQAIAKGICAYYAKYVDEATRKQLRDLLISYDRSLLVADPRRCEPKKFGGRGARARFQKSYR 145

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BLAST of Gchil621.t1 vs. uniprot
Match: A0A1J3K4P6_NOCCA (40S ribosomal protein S16 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K4P6_NOCCA)

HSP 1 Score: 218 bits (555), Expect = 8.640e-71
Identity = 107/139 (76.98%), Postives = 126/139 (90.65%), Query Frame = 0

Query:    9 SVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            SVQVFG+KKTAVAVAH    G+G++KINGTPL+L++PE LR KV EP+L+LG ERF+++DIR+RVKGGG+T+QIYAIRQAIAK LVAYYQK+VDE  K+E+K +LL YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    6 SVQVFGKKKTAVAVAHCK-QGRGIIKINGTPLELVQPEILRFKVFEPMLLLGNERFSNVDIRVRVKGGGHTSQIYAIRQAIAKSLVAYYQKFVDEASKKEIKDILLGYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 143

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BLAST of Gchil621.t1 vs. uniprot
Match: A0A7S0T5W6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T5W6_9RHOD)

HSP 1 Score: 216 bits (551), Expect = 3.520e-70
Identity = 105/142 (73.94%), Postives = 127/142 (89.44%), Query Frame = 0

Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQER-FADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            KNSVQ FGRKKTAVAVAH+   GKG++K+NG PL+LLEPEGLR+KV EP+L+LG+ER F+D+D R+RV GGG T+Q+YA+RQAIAKG+VAYYQKY+DEV K ELK +L+AYD+ LLVADPRR EPKKFGGRGAR+R+QKSYR
Sbjct:    3 KNSVQTFGRKKTAVAVAHVVP-GKGMIKVNGKPLELLEPEGLRIKVFEPILLLGKERYFSDLDFRIRVNGGGQTSQVYAVRQAIAKGIVAYYQKYMDEVTKNELKDILIAYDKQLLVADPRRMEPKKFGGRGARSRYQKSYR 143

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BLAST of Gchil621.t1 vs. uniprot
Match: A0A5J4Z8Z2_PORPP (40S ribosomal protein S16-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8Z2_PORPP)

HSP 1 Score: 216 bits (550), Expect = 4.830e-70
Identity = 104/141 (73.76%), Postives = 125/141 (88.65%), Query Frame = 0

Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            K SVQVFGRKKTAVAVAH+T  GKG++K+NG PL+LLEPEGLR+KV EP+L+LGQERFA++D R+RVK GG T+Q+YA+RQAI+KGLVAYYQKY DEV K ELK +L+AYD+ LLVADPRR EPKK GGRGAR+++ KSYR
Sbjct:    3 KQSVQVFGRKKTAVAVAHVTA-GKGMIKVNGKPLELLEPEGLRIKVFEPILLLGQERFAELDFRIRVKSGGQTSQVYAVRQAISKGLVAYYQKYRDEVSKNELKDILIAYDKQLLVADPRRMEPKKIGGRGARSKYGKSYR 142

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BLAST of Gchil621.t1 vs. uniprot
Match: A0A7S3XF86_9CHLO (30S ribosomal protein S9, chloroplastic n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XF86_9CHLO)

HSP 1 Score: 213 bits (541), Expect = 1.140e-68
Identity = 105/139 (75.54%), Postives = 123/139 (88.49%), Query Frame = 0

Query:    9 SVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            SVQ FGRKKTAVAVA  T  GKG++K+NGTP++L+EPE LR KV EPVL+LG+ R A++DIR+RVKGGG+ AQ YAIRQA+AK +VAYYQKYVDE  K+E+K +LLAYDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR
Sbjct:    5 SVQCFGRKKTAVAVA-FTKRGKGIVKLNGTPIELIEPETLRYKVAEPVLLLGKARLANLDIRIRVKGGGHVAQCYAIRQALAKSVVAYYQKYVDEATKKEIKDILLAYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR 142

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BLAST of Gchil621.t1 vs. uniprot
Match: H3G8T5_PHYRM (Uncharacterized protein n=29 Tax=Oomycota TaxID=4762 RepID=H3G8T5_PHYRM)

HSP 1 Score: 212 bits (539), Expect = 2.450e-68
Identity = 106/139 (76.26%), Postives = 122/139 (87.77%), Query Frame = 0

Query:    9 SVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            SVQVFGRKK A AVA+    G GL+K+NGTP++L+EPE LRVK  EPVL+LGQ+RFA++DIR+RVKGGG+TAQIYAIRQAIAK +VAYYQKYVDE  K+E+K +LLAYDRTLLVADPRRCE KKFGG  ARARFQKSYR
Sbjct:    7 SVQVFGRKKNATAVAYCK-RGHGLIKVNGTPIELVEPEILRVKTYEPVLLLGQQRFANVDIRIRVKGGGHTAQIYAIRQAIAKAIVAYYQKYVDEASKKEIKDILLAYDRTLLVADPRRCEAKKFGGGSARARFQKSYR 144

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BLAST of Gchil621.t1 vs. uniprot
Match: T1EG85_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EG85_HELRO)

HSP 1 Score: 211 bits (538), Expect = 3.830e-68
Identity = 107/148 (72.30%), Postives = 125/148 (84.46%), Query Frame = 0

Query:    1 MAITKG-KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKYVDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            M   KG K SVQV+GRKKTA AVAH   NG GL+K+NG P+DLLEPE LR KV EP+L+LG+ERF+ +DIR+RV GGG  +QIYAIRQAI+K LVAYYQKYVDE  K+E+K +L++YDRTLLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct:    1 MPAAKGPKQSVQVYGRKKTATAVAHCK-NGSGLLKVNGRPIDLLEPELLRYKVQEPLLLLGKERFSAVDIRVRVSGGGRVSQIYAIRQAISKALVAYYQKYVDEASKKEIKDILISYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 147

The following BLAST results are available for this feature:

BLAST of Gchil621.t1 vs. uniprot

BLAST of Gchil621.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
R7QFT3_CHOCR	9.050e-90	91.78	Uncharacterized protein n=2 Tax=Rhodymeniophycidae...	[more]
M2VVH0_GALSU	3.260e-78	78.62	40S ribosomal protein S16e n=1 Tax=Galdieria sulph...	[more]
A0A1X6PKD2_PORUM	4.330e-78	80.28	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0A6T6PN43_9RHOD	6.090e-76	78.01	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A1J3K4P6_NOCCA	8.640e-71	76.98	40S ribosomal protein S16 (Fragment) n=1 Tax=Nocca...	[more]
A0A7S0T5W6_9RHOD	3.520e-70	73.94	Hypothetical protein n=1 Tax=Erythrolobus madagasc...	[more]
A0A5J4Z8Z2_PORPP	4.830e-70	73.76	40S ribosomal protein S16-1 n=1 Tax=Porphyridium p...	[more]
A0A7S3XF86_9CHLO	1.140e-68	75.54	30S ribosomal protein S9, chloroplastic n=1 Tax=Pi...	[more]
H3G8T5_PHYRM	2.450e-68	76.26	Uncharacterized protein n=29 Tax=Oomycota TaxID=47...	[more]
T1EG85_HELRO	3.830e-68	72.30	Uncharacterized protein n=1 Tax=Helobdella robusta...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 2..147 e-value: 1.4E-51 score: 176.5
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 14..147 e-value: 1.4E-31 score: 109.5
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 6..147
None	No IPR available	PANTHER	PTHR21569:SF35	30S RIBOSOMAL PROTEIN S9P	coord: 6..147
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 75..93
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 9..147

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004380_pilon	contig	tig00004380_pilon:670675..671357 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil621.t1	Gchil621.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004380_pilon 670675..671357 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil621.t1 ID=Gchil621.t1|Name=Gchil621.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=148bp
MAITKGKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRV
KVLEPVLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKY
VDEVQKRELKSMLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR000754	Ribosomal_S9
IPR020574	Ribosomal_S9_CS
IPR020568	Ribosomal_S5_D2-typ_fold