Gchil616.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil616.t1
Unique NameGchil616.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length278
Homology
BLAST of Gchil616.t1 vs. uniprot
Match: A0A2V3J2K5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2K5_9FLOR)

HSP 1 Score: 237 bits (605), Expect = 3.520e-74
Identity = 114/268 (42.54%), Postives = 168/268 (62.69%), Query Frame = 0
Query:    5 DRSIWFQNKGSVA------LESKITRLGTVFSNSSWASDVFVFFHNGMRHEIEDLTNMIQCAAFQKDGFDERELVAFEKWFVDFSYMVAMYFEMEATIVYPALLEIRSGLNGAIERQRDCHKKVVKHLLEIHAECLLFTMSGRRVGNCNFPVEKHGMKRSVDRMHGLAHGLAVNLEQIFEWELNILVPVIRECLMKWEARALVRRCLRDFLAHKIGSEVVWGYFRGVPEEIKEEQLANVDPLRRILLRAKERKWMRTHHAIPRRFEAL 266
            ++SIWF+N    +      + S + R  ++F + SW+SDVFVFFHNG+RHE+ DL  M++  A        + L+A EKWFV FS MVAMYF +   ++YP L+  +S L   + ++   H  ++ HLLEIH+ECL  TM G    +    +   GM  SV RM  L HGL  ++EQIFEWE  +LVPV++E ++ WEAR L+++CL +  + ++G EV+WGYFRGVP + KE+  A ++ L R+ LRAKE++W+R H     +  +L
Sbjct:   12 EQSIWFENSEPRSEPRREQVVSHLIRFDSLFHHDSWSSDVFVFFHNGVRHELLDLHKMLKLTAHDDGRIRIKHLLALEKWFVQFSQMVAMYFVVNDNVIYPTLVTFQSNLRATLTKRGKRHVGIINHLLEIHSECLTLTMIGAHRSSAKRALSCPGMGESVSRMIRLLHGLVSSVEQIFEWEFTVLVPVVKERMLLWEARELIKKCLDEMSSCEVGREVMWGYFRGVPTDYKEKYFAAMERLTRMKLRAKEKRWLREHQGFSNKLSSL 279          
BLAST of Gchil616.t1 vs. uniprot
Match: R7QGQ1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGQ1_CHOCR)

HSP 1 Score: 118 bits (296), Expect = 7.560e-29
Identity = 68/206 (33.01%), Postives = 111/206 (53.88%), Query Frame = 0
Query:   56 MIQCAAFQKDGFDERELVAFEKWFVDFSYMVAMYFEMEATIVYPALLE-IRSGLNGAIERQRDCHKKVVKHLLEIHAECLLFTMSGR-RVGNCNFPVEKHGMKRSVDRMHGLAHGLAVNLEQIFEWELNILVPVIRECLMKWEARALVRRCLRDFLAHKIGSEVVWGYFRGVPEEIKEEQLANVDPLRRILLRAKERKWMRTHHAI 259
            M++ AAF+ D F     +A +KW VDFS +V++YF ++ +++YP +L  I S     I   R   + ++  LLEIH   L F  + + R        +   +  ++ ++          LE  F WEL+ + P IR C+ + E+RAL R  +   L+ ++G +++  Y   VP E+KE   A+VD  + I LR KE+KWMRTH ++
Sbjct:    1 MLRKAAFRIDTFKTSHAIALQKWLVDFSQIVSLYFFVQESVIYPQILSRIDSDDRTLIIELRKKTQPLIDELLEIHKGSLTFVSACQGRDDEKLLNFDTASLYLALQQLSKQVFRCVAELEIFFTWELDHVAPEIRSCMNRKESRALQRNAIMKILSQRVGEDLLGAYSHWVPSEVKELYFASVDRFKLIRLRGKEKKWMRTHKSL 206          
The following BLAST results are available for this feature:
BLAST of Gchil616.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2K5_9FLOR3.520e-7442.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGQ1_CHOCR7.560e-2933.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.520nmb1532 protein domain likecoord: 32..206
e-value: 1.0E-5
score: 27.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:627836..628669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil616.t1Gchil616.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 627836..628669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil616.t1 ID=Gchil616.t1|Name=Gchil616.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=278bp
MTTTDRSIWFQNKGSVALESKITRLGTVFSNSSWASDVFVFFHNGMRHEI
EDLTNMIQCAAFQKDGFDERELVAFEKWFVDFSYMVAMYFEMEATIVYPA
LLEIRSGLNGAIERQRDCHKKVVKHLLEIHAECLLFTMSGRRVGNCNFPV
EKHGMKRSVDRMHGLAHGLAVNLEQIFEWELNILVPVIRECLMKWEARAL
VRRCLRDFLAHKIGSEVVWGYFRGVPEEIKEEQLANVDPLRRILLRAKER
KWMRTHHAIPRRFEALANVLTPRPVRR*
back to top