Gchil610.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil610.t1
Unique NameGchil610.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1155
Homology
BLAST of Gchil610.t1 vs. uniprot
Match: A0A2V3IZT0_9FLOR (Heterogeneous nuclear ribonucleoprotein C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZT0_9FLOR)

HSP 1 Score: 754 bits (1948), Expect = 2.690e-253
Identity = 514/1048 (49.05%), Postives = 602/1048 (57.44%), Query Frame = 0
Query:    1 MSASQTSAQNTNSTSLPQNHSGIVSHVRDVPQQSSLETRPLPEPGDFKEQL---PVAITS-RDPKVPVSPTTPTNIPSTSNSSNAVDDVPRSPPTQQIPN----PSVPTPAPVQVDARSALHAPPASPKTNSDAARIDPGAL---SLSASNETVPKVDVNPPPNPSTAVSCPASVIPSLPSIQPTMPEQKAPVHDTQQFGSESLLKDEALSVPAVVTKQNANIAHDQP---TPSKIEASVPSPLSPHTPDESTTSPMNFKAEQTAYSPQHPLAQSTPDNSTQKMQNDTQGMA-----DSQKTVDSEAGERGKGQPLSAAPDTSEMQFAAPTQSDSEAPVPQ-PAQKPH------IGTSTPEENSHLPS---TSRPLPRNLPKFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMPNSVANQYTGTGAGQVQGNMGVSIGNTMHRNMGVNSAMGNNRSPWNIQTGIGPQDGKTGWVNGSRVPRVARNVQTGASNMGNLPMQPPPPQSNMANTGSGGYGYDMHMSNAGYGQAGMSG-GRGGSYGNQDYMGTQGFGADYSRNPS-QAFNANGVGAYPEEPFNQSNNRGTYGSRADNEYDPAAVTPTQRPNVTMGDGYAWNRRPNARHSGYGA-VTGATNVPNTQRMGAPYSAGRQY---EFSEN-QYDGQGRMPYGNSYDSTNPYGNVGTSNTQGYGAYGNVSGSYGPGNETREQYNPQSINPRYSQQSGAQSGTQYRNPGWSENGAQRPMNNHMGGNFYNSHASNNSGRSGGMRGQAEVGQDNRYIEGEYGRSNINXXXXXXXVYGNRQSAGVPG 1012
            MSAS TS  NT+ TS P + S  VS V    Q S LETR LP   D  +Q    P A  S ++PKVPVS             SNAV+D      T  + N    PS   PA  Q++ R++   PP+SP+TN     + P  L   S SA+  +VPKV+ +PP                                                           +  H       P K E   PS  S  TP+++T    + KA+  A                 K    TQG A     D+Q   D+                            +   P    P ++P       I +   + N   P    ++R LPRNLPK+ K+RPKNARVFIGNLASEYTS +EIVEIFHKYGTLIEEPVLRRSFGFVQYSTAE+ASLAV +EQ R+IGGIALDLSIADNREVKKGTHIQNNTPFQHPK  H  GQF Q RGR+R+RDH G  QQG RKRRRSVSPNSALRKGGVHPPQY RQRP+PKNGI+LRILCMSPTAKGYARHCEN FRNMT LNADIL+IVATNLGEALGKAMRD IPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMP+ VANQYT  G   VQGN G   GN MH+NMG N  MG++R  W +Q G+ P D K+GW  GSR PR  RN+    S MG+LP+ PP            GYGYD H  +  YGQ+ M G GR   Y    Y              + Q++  NG+ +Y  + + QS       S AD+EYDPAAVTPTQRP  T+GDGY WNR    R   YG      TN   +QR+   Y+ G QY   E++ N QY  QG+  YG +YDS + YGNVG +  QGY  YGN    Y  GN+TR+QYN Q  +PRY Q    +S   YR+ GWSE+ + RPMNN MG  +YN  A N  GR+GGMR QA+  QDNRY      R++++        YGNRQ   VPG
Sbjct:    1 MSASHTSDPNTHPTSHPSHPSATVSDV----QNSLLETRSLPPQPDNTQQQHQSPAAQPSPQEPKVPVSXXXXXXXXXXXXXSNAVEDT-----TTALANQSNLPSGSAPATEQIEPRNSSPRPPSSPETNR---HLPPPGLADHSQSATTTSVPKVEPHPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSTTHQSSQTHAPLKAETVAPSQPSFQTPEQATAD-TSAKADHKAXXXXXXXXXXXXXXXXHKDHIVTQGTATPRAVDAQTDADNXXXXXXXXXXXXXXXXXXXXXXXXXXXQERVRPQKHHPDEQPSFPAGNDINSQVRDLNPSSPRLLLSTRSLPRNLPKYVKSRPKNARVFIGNLASEYTSPREIVEIFHKYGTLIEEPVLRRSFGFVQYSTAESASLAVKNEQGRMIGGIALDLSIADNREVKKGTHIQNNTPFQHPKS-HLSGQFPQTRGRVRDRDHSGLPQQGARKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIFLRILCMSPTAKGYARHCENVFRNMTGLNADILYIVATNLGEALGKAMRDTIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMPSVVANQYTNMGP--VQGNRG---GN-MHQNMGANGGMGSSRPQWGMQHGMPPPDNKSGWGLGSRGPRGGRNIPN-PSPMGSLPVHPPXXXXXXXVMNGSGYGYDSHGGSTNYGQSNMGGTGRDEDYSRSGYXXXXXXXXXXXXXXAAQSYTGNGMNSYTSDQYGQSGXXXXXXSGADHEYDPAAVTPTQRPGATVGDGYNWNRGTGTRDMAYGGNAQTTTNGSGSQRLHGSYTPGGQYSSNEYTNNGQYHDQGQGQYGGAYDSRHSYGNVGNNAGQGYDGYGNAGEPYASGNDTRDQYNTQPYDPRYGQ---GRSNAPYRSSGWSESVSGRPMNNQMG-MYYN--APNQVGRTGGMRSQADASQDNRYGXXXXXRNDMSAGYTAPPGYGNRQ---VPG 1018          
BLAST of Gchil610.t1 vs. uniprot
Match: R7QA32_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA32_CHOCR)

HSP 1 Score: 446 bits (1146), Expect = 4.190e-133
Identity = 358/858 (41.72%), Postives = 438/858 (51.05%), Query Frame = 0
Query:  296 PLSAAPDTSEMQ--FAAPTQSDSEAPV-----PQPAQKPHIGTSTPEENSHLPST-SRPLPRNLPKFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGV-RKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMPNSVANQYTGTGAGQVQGNMGVSIGNTMHRNMGVNSAMGNNRSPWNIQTGIGP-----QDGKTGWVNGS-RVPRVARNVQTGASNMGNLPMQPPPPQSNMANTGSGGYGYDMHMSNAGYGQAGMSGGRG--GSYGN-------QDYMGTQGFG------------------------------ADYSRNPSQAFN-ANGV---GAYPEEPFNQSNNRG--TYGSRADN---EYDPAAVTPTQR-PNVTMGDGYAWNR-------------RPNA--------RHSGYGAVTGATNVPNTQRMGAPYSAGRQYEFSENQYDGQGRMPYG-----NSYDST-NPYGNVGTSNTQGYGAYGNVSGSYGPGNETREQYNPQSINPRYSQQSGAQSGTQ-YRNPGWSENGAQRPMNNHMGGNFYNS---HASN-NSGRSGGMRGQAEVGQDNRYIEGEYGRSNINXXXXXXXVYGNRQSAGVPGVSSSGANAPALNTGVDIGRLNHLISAFQQKQAAQGIVPDASSRVV 1057
            P +A P TS      AAP  S   AP      P P  +    + T +  + +P+   RP PR LPK  K+RP+NARVFIGNLASEYT   +I++IFHKYG LIEEPVLRRSFGFVQYS+AEAAS AV  EQ RIIGGI +DLSIADNREVK+GTH+ NNTPF  P P    G+ +  RGR+RERD     +    RKRRRS+SP SA +KGGVHPPQYRR RP+P+NG+YLRILCMSPTA+ YAR CENTFR+MT L AD+LHIVA  LGEALG+AMRD IPYVMVVAS+DV+ GTCTIRTLEKTGYEKSGRGNGVIPL+EAVEVCLIERGVI P ++A Q  G   G         +G T H        MG++   WN  +G  P     +  K GW+ G  R P  +       S    +  QPP           GG G ++ M    YG  G+ G RG  GS+G          +  +QG+G                               DY R      N A G+   G Y +    Q NN+   +Y  R DN   EYDPAAV P QR PN    +G  WNR             RP A        R+ G+  + G T V      G+  +A   Y +  +Q  G    PY      + YD+  N Y   G     GYG Y    G  G   ++ E  N      RY     A+   Q Y  PG   +G   P     G +  NS   HA N +S   GG     + G  +  + G+    +           G     G  GVS S AN      G D G +    S+  Q  A  G+   A++ V+
Sbjct:  346 PHTADPRTSSPSPHSAAPPSSVRPAPAHATTPPGPRNRRRHTSPTKQPTADVPAQYERPFPRGLPKTVKHRPENARVFIGNLASEYTDVAQIIKIFHKYGDLIEEPVLRRSFGFVQYSSAEAASRAVAGEQGRIIGGIGIDLSIADNREVKRGTHVANNTPFGQPAP---AGK-AHARGRVRERDFGSEDRNDKSRKRRRSLSPASAAKKGGVHPPQYRRMRPDPRNGVYLRILCMSPTARSYARQCENTFRSMTGLPADVLHIVAAGLGEALGRAMRDVIPYVMVVASKDVDDGTCTIRTLEKTGYEKSGRGNGVIPLREAVEVCLIERGVIAPQNIAQQMNGAPRG--------GMGRTGHGGRQGPHGMGSHGRQWNSHSGAHPGNAPVETAKPGWMTGQPRAPHPSNPRAAAGSVAPGIHHQPP----------HGGVG-NVVMPGGAYGYNGVEGNRGHYGSHGPGPQAAPVPPHRPSQGYGLVPAQSQGGYEXXXXXXXXXXXXXXGHQNGGDYMRRSGAPVNPALGMHPPGGYMDRYRGQVNNQNANSYNGRGDNRESEYDPAAVMPAQRGPNPNYENG--WNREVAPVNRETYGGDRPPAHQPAVARDRNGGFQTIGGGTQV---YPGGSGGAAANNYGYDRSQNQGALGGPYAAMNNTSGYDARQNAY--PGAQAAVGYGQYAGPQGENGMPPQSAEGVN------RYGGGMYAEGQQQAYTVPGMYNSGTPGPGGRGGGWSGTNSSHAHAMNMHSPPMGGGSNMNQSGMPHGGMGGQIAMQSNAGNQMTGSAGGXXXXXGY-GVSQSRANMNGGYIGRDAGGMG---SSPPQANANSGVGASAAASVL 1163          
BLAST of Gchil610.t1 vs. uniprot
Match: A0A1X6NL64_PORUM (RRM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL64_PORUM)

HSP 1 Score: 208 bits (530), Expect = 2.450e-51
Identity = 144/359 (40.11%), Postives = 190/359 (52.92%), Query Frame = 0
Query:  309 AAPTQSDSEAPVPQPAQKPHIGTSTPEENSHLPSTSRPLPRNLPKFAK-NRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGT-------------------HIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSP----------NSALRKGGVHPPQYRR--QRPEPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMPNSVANQYTGTGAGQ 635
            AAPT     APVP+      +      + S LP  S  L   L + +   R +N+RVFIGNLASE T+  E+  IF KYG L+E PVLRRSFGFVQ+ T EAA+ A+  EQ R +GG+ +DLS+ADNRE+++                               P    A+G  S     +       PQ     KRRRS SP          +  + KG V  P+Y R  QRP+ +NGI +R+L M  +++ YA   E + RN   +N D+++I A  LGE LG A  + IPY MVV+S+D    TCTIRTLE TGYEK G GNGVI + +A+E+  IE G+  P      Y G+G  Q
Sbjct:  296 AAPTT----APVPKTLGGGGVVVKPLGKPSTLPGRSGGLDSPLARSSMLPRARNSRVFIGNLASEATTEGELASIFSKYGRLMETPVLRRSFGFVQFETPEAAATAISSEQGRSVGGMRVDLSLADNRELRRAAGDGPAGASXXXXXXXXXXXXXXXXXXXXXPPSSGALGASSAGGSAM-------PQWTRGPKRRRSASPTPLGGPPPPRSGRVIKGLVRAPEYGRGRQRPQSRNGILVRVLVMGSSSRSYAHTVETSLRNTLGVNTDLVYIEACKLGEGLGLAGSNQIPYAMVVSSKDESGSTCTIRTLEPTGYEKVGHGNGVISVNDAMEIISIEEGLHPP---PGSYGGSGGPQ 640          
BLAST of Gchil610.t1 vs. uniprot
Match: A0A7S3EF73_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EF73_9RHOD)

HSP 1 Score: 200 bits (508), Expect = 6.030e-50
Identity = 116/259 (44.79%), Postives = 160/259 (61.78%), Query Frame = 0
Query:  359 PKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERG 617
            P N+RVFIGNLASE  + +E+V++F KYG L+EEPV+RRSFGFVQYS+  AA+ A+  EQ +I+GG  +DLS ADNR+ ++     +N   +H +           RGR       G      RKRRRSVSP +     G      R++RP+P NG+ +RIL M   A+ YA  CE   R++  L+ D   I ++ LGE+L ++    +PYV+VV+SRD E  TCTIRTLE TGYEK+    GVI  +EA++V + + G
Sbjct:  167 PPNSRVFIGNLASENLTKQEVVDVFEKYGRLVEEPVMRRSFGFVQYSSQAAAAEAIRCEQGKILGGRRVDLSFADNRDPRR-----SNDGGRHGR----RDDERDSRGREDRHRRDGGYDNDRRKRRRSVSPRAR----GFGNESGRKRRPDPVNGVKVRILVMGSHARDYASQCEYIIRSLLMLSTDFEQIDSSKLGESLRRSRDQNVPYVIVVSSRDEEKKTCTIRTLEATGYEKAKSEKGVIGFREALDVLVADEG 412          
BLAST of Gchil610.t1 vs. uniprot
Match: A0A7S0FZY4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY4_9RHOD)

HSP 1 Score: 199 bits (505), Expect = 5.140e-49
Identity = 120/262 (45.80%), Postives = 162/262 (61.83%), Query Frame = 0
Query:  359 PKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPR-GRIRERDH--PGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERG 617
            P N+RVFIGNLASE  + +E+V++F KYG L+EEPV+RRSFGFVQYS+   A+ A+  EQ +I+GG  +DLS ADNR+ ++      N   +H       G+    R GR RE  H   G      RKRRRSVSP S     G      R++RP+P NGI +RIL M   A+ YA  C+   R++  L+ D   I ++ LGE+L ++    +PYV+VV+SRD E  TCTIRTLE TGYEK+    GVI  +EA++V + + G
Sbjct:  370 PPNSRVFIGNLASENLTKQEVVDVFEKYGRLVEEPVMRRSFGFVQYSSQAPAAEAIRCEQGKILGGRRIDLSFADNRDPRR-----TNEGGRH-------GRRDDDRDGRGREDRHRRDGGYDNDRRKRRRSVSPRSR----GFGNESGRKRRPDPVNGIKVRILVMGSHARDYASQCDYIIRSLLMLSTDFEQIDSSKLGESLRRSRDQNVPYVIVVSSRDEEKKTCTIRTLEATGYEKAKSEKGVIGFREALDVLVADEG 615          
BLAST of Gchil610.t1 vs. uniprot
Match: M2Y4L5_GALSU (RNA-binding protein (Nab3), putative n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4L5_GALSU)

HSP 1 Score: 176 bits (445), Expect = 1.130e-41
Identity = 107/273 (39.19%), Postives = 157/273 (57.51%), Query Frame = 0
Query:  353 KFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRP-EPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCL----IERGVIM 620
            K + NRP ++RVFIGNLASE T+  E+V IF KYG LIEEPV+RRSFGFVQY  A++A  A+  EQ R+IGG+ +DLS+ADNR+ ++            P+    VG     +    +R +P           R+  PN+  R        +RR R  + +NG+ +R+L M   A+GYA  CE T R    L  D+++I A  LG++L  A    +PYV+VV S+D   G+C++R L+  GY+K   G+  +P +E + + +    +E+ VIM
Sbjct:  238 KSSFNRPADSRVFIGNLASERTTVAELVSIFSKYGNLIEEPVIRRSFGFVQYDNADSAYRAIEAEQGRVIGGMPIDLSLADNRDSRRN-----------PRTHSVVGPDKSRKNTGTDRFNPYE---------RAGRPNTIGRPARQSKGNFRRPRRFDSRNGVAVRVLVMGQHARGYAHSCEATIRAFLGLQTDVVYIEANKLGDSLELAKEQLVPYVIVVNSKDEREGSCSLRILDFEGYQKVKGGS--LPFREVLNIIVEEEDLEQQVIM 488          
BLAST of Gchil610.t1 vs. uniprot
Match: A0A7V5I4F8_9BACT (RRM domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I4F8_9BACT)

HSP 1 Score: 164 bits (416), Expect = 7.350e-38
Identity = 103/276 (37.32%), Postives = 153/276 (55.43%), Query Frame = 0
Query:  349 RNLPKFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNR--EVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGI-YLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMP 621
            + LP+       +AR+FIGNLASE TS  E++ IF KYG +IE+P+L RS+ F+QY   E+  LA+ +EQ R+IGG  LDLS+A  R  +   G H       +     H+ G   + +         GP QQ    R+R  +   AL  GG  PP        P+ G  Y+RIL +  T++  A   +N  R++  ++AD+ +I + +LG AL +A    + YV+VV+S+D   GTC+IRT EKTG+E +G G  +IP  EA+ +   E  + +P
Sbjct:  406 QTLPRRHPEGTNDARLFIGNLASETTSPVELISIFSKYGRIIEQPLLLRSYAFIQYDNPESTQLAIRYEQGRLIGGRHLDLSVASGRRNDSGSGNHGTRRATGREAAAHHSTGPVVEGKR--------GPLQQSSGWRKRDAA---ALETGGPRPP--------PRPGAPYVRILVIGTTSRSMAHAMQNVIRSLG-ISADVAYIFSDSLGTALKEAYAQCVRYVIVVSSKDASKGTCSIRTYEKTGFEYAG-GGSIIPFHEALAIIFREERINLP 660          
BLAST of Gchil610.t1 vs. uniprot
Match: A0A7J7ILX9_9RHOD (RRM domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILX9_9RHOD)

HSP 1 Score: 162 bits (411), Expect = 3.270e-37
Identity = 144/443 (32.51%), Postives = 223/443 (50.34%), Query Frame = 0
Query:  181 PVHDTQQFGSESLLKDEALSVPAVVTKQNANIAHDQPTPSKIEASVPSPLSPHTPDESTTSPMNFKAEQTAYSPQHPLAQSTPDNSTQKMQNDTQGMADSQKTVDSEAGERGKGQPLSAAPDTSEMQFAAPTQSDSEAPVPQP-AQKPHIGTSTPEENSHLPSTSRPLPRNLPKFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGI-YLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMP 621
            PV   ++    S   DEA SVP   T  NA +       S+ EAS+ S +S       T  P + +A  T+  PQ    Q   D+S +  Q D   ++++++ +D E       QP+++AP +  +       S+S +P  Q  + K     S  E   +L +    LPR  P+       +AR+FIGNLASE TS  E++ IF KYG ++E+P++ RS+ F+QY   E+  LA+ +EQ R+IGG  LDLS+A  R    G+    N    H    H     S P G+           QG+ +R+R  S    +  GG  PP        P+ G  Y+RIL +  T++  A   +N  R++  ++ D+ +I +T+LG AL +A    + Y++VV S+D   G C++RT EKTGYE +G GN ++P  EA+ +   E  + +P
Sbjct:  311 PVVRRKRLKLASADSDEATSVPTQTT--NAELVA-----SEAEASIESLVSTIPRRTKTVGP-SAEAASTSRDPQD---QEHADHSDEHPQ-DADPISEAKEGLDDE-------QPVTSAPPSEGV-------SESWSPAEQDDSDKLRPAMSLKEAAEYLQT----LPRRHPESTN----DARLFIGNLASESTSQVELLSIFSKYGRIMEQPLMLRSYAFIQYDCPESTQLAIRYEQGRLIGGRHLDLSVASGRR-GSGSSSNANANDSH----HLGSAGSGPEGKR------AASNQGMNRRKRDAS---TMDMGGPRPP--------PRPGAPYVRILVIGTTSRPMAHAMQNVIRSLG-ISTDVAYIFSTHLGTALKEAYAQCVRYMIVVTSKDASKGACSLRTYEKTGYEHAGGGN-IMPFHEALAIIFREERINLP 695          
BLAST of Gchil610.t1 vs. uniprot
Match: A0A7S0ZI55_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI55_9RHOD)

HSP 1 Score: 142 bits (359), Expect = 7.190e-32
Identity = 97/274 (35.40%), Postives = 144/274 (52.55%), Query Frame = 0
Query:  337 NSHLPSTSRPLPRNLPKFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGIYLRILCMSPTAKGYARHCENTFRN-MTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAV 609
            +S +PS    LP+N P   K+ P ++R+FIGNLASE+TS++++VEIF KYGT+IE P +R+S+ F+QY  A++   A+ HE  R +  ++ +LSIA  RE K   +  +       +   A GQ+ Q                      R ++P S   +G     +    R        +R+L M P AK Y R C+N   +  + +  D+  I    LG AL  A  + IP VMVVA RD ++ TC++RTLE +GYEK   G   I L +A+
Sbjct:  221 SSGVPSVLAGLPKNAPPALKSVP-HSRLFIGNLASEHTSAEQLVEIFGKYGTIIELPTIRKSYAFIQYDNADSVLQAIEHENGRTLHSLSWELSIAGTRERKSAQNSSDKY-----RNGSAFGQYPQ----------------------RPITPGS---RGRASTAKLDVDR--------IRVLVMGPQAKPYGRKCQNWLMSRFSPIPVDLAVIDREKLGSALRTAQDEHIPLVMVVAGRDEQSRTCSLRTLEPSGYEKVS-GQAQISLDDAM 454          
BLAST of Gchil610.t1 vs. uniprot
Match: A0A6T5WAM3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5WAM3_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 1.980e-24
Identity = 104/350 (29.71%), Postives = 153/350 (43.71%), Query Frame = 0
Query:  284 VDSEAGERGKGQPLSAAP---DTSEMQFAAPTQSDSEAPVPQPA----------QKPHIGTSTPEE-NSHLPSTSRP----------LPRNLPKFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFGFVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVHPPQYRRQRPEPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAV 609
            +D E  ER +    +AA    D  +   AA  Q +SE    Q A          +KP +    P+    H  S  +P          LP+N P   KN P   R+FIGN ASE TS+ E+VEIF +YGT+IE+P +R+S+ FVQY + E    A+  E +R   G++ +LSIA  R     T   + +         + G  ++  G                    + S  + +   GV               + +R++ M   A+GYA            L++D++      L  +L  A    IP V+VVA RD     C++RTLE TGYEK   G   +PL+EA+
Sbjct:   63 IDVEGAERAEADTAAAAASRVDARKRAIAATQQENSEDXXAQSASSALPDVPIAKKPKVAEHVPKSPQPHTSSAPQPSVAPVLKASQLPKNGPSEFKNTP-GTRLFIGNFASEGTSADELVEIFSRYGTIIEQPTIRKSYAFVQYDSPEPVLRAIAAENHRTENGLSWELSIAGTRPAAASTSALSAS---------SAGAAARYSGGT------------------AYSTGAGV---GV---------------VQVRVMAMGTQARGYAERVSRAASERLALSSDVVSTDREQLRTSLRTAQDARIPVVLVVAGRDERTSVCSMRTLELTGYEKVA-GRSELPLEEAL 365          
The following BLAST results are available for this feature:
BLAST of Gchil610.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IZT0_9FLOR2.690e-25349.05Heterogeneous nuclear ribonucleoprotein C n=1 Tax=... [more]
R7QA32_CHOCR4.190e-13341.72RRM domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1X6NL64_PORUM2.450e-5140.11RRM domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S3EF73_9RHOD6.030e-5044.79Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0FZY4_9RHOD5.140e-4945.80Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
M2Y4L5_GALSU1.130e-4139.19RNA-binding protein (Nab3), putative n=1 Tax=Galdi... [more]
A0A7V5I4F8_9BACT7.350e-3837.32RRM domain-containing protein n=2 Tax=cellular org... [more]
A0A7J7ILX9_9RHOD3.270e-3732.51RRM domain-containing protein n=1 Tax=Cyanidiococc... [more]
A0A7S0ZI55_9RHOD7.190e-3235.40Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A6T5WAM3_9RHOD1.980e-2429.71Hypothetical protein n=1 Tax=Erythrolobus australi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 363..430
e-value: 2.0E-8
score: 44.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 364..424
e-value: 5.7E-6
score: 26.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 362..434
score: 13.020831
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 352..447
e-value: 1.7E-13
score: 52.5
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 511..659
e-value: 8.6E-10
score: 40.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 856..969
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 856..988
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1063..1087
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1118..1154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1066..1083
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..345
NoneNo IPR availablePANTHERPTHR13968HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINcoord: 358..492
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 343..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:613555..617019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil610.t1Gchil610.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 613555..617019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil610.t1 ID=Gchil610.t1|Name=Gchil610.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1155bp
MSASQTSAQNTNSTSLPQNHSGIVSHVRDVPQQSSLETRPLPEPGDFKEQ
LPVAITSRDPKVPVSPTTPTNIPSTSNSSNAVDDVPRSPPTQQIPNPSVP
TPAPVQVDARSALHAPPASPKTNSDAARIDPGALSLSASNETVPKVDVNP
PPNPSTAVSCPASVIPSLPSIQPTMPEQKAPVHDTQQFGSESLLKDEALS
VPAVVTKQNANIAHDQPTPSKIEASVPSPLSPHTPDESTTSPMNFKAEQT
AYSPQHPLAQSTPDNSTQKMQNDTQGMADSQKTVDSEAGERGKGQPLSAA
PDTSEMQFAAPTQSDSEAPVPQPAQKPHIGTSTPEENSHLPSTSRPLPRN
LPKFAKNRPKNARVFIGNLASEYTSSKEIVEIFHKYGTLIEEPVLRRSFG
FVQYSTAEAASLAVMHEQNRIIGGIALDLSIADNREVKKGTHIQNNTPFQ
HPKPPHAVGQFSQPRGRIRERDHPGPQQQGVRKRRRSVSPNSALRKGGVH
PPQYRRQRPEPKNGIYLRILCMSPTAKGYARHCENTFRNMTRLNADILHI
VATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGN
GVIPLKEAVEVCLIERGVIMPNSVANQYTGTGAGQVQGNMGVSIGNTMHR
NMGVNSAMGNNRSPWNIQTGIGPQDGKTGWVNGSRVPRVARNVQTGASNM
GNLPMQPPPPQSNMANTGSGGYGYDMHMSNAGYGQAGMSGGRGGSYGNQD
YMGTQGFGADYSRNPSQAFNANGVGAYPEEPFNQSNNRGTYGSRADNEYD
PAAVTPTQRPNVTMGDGYAWNRRPNARHSGYGAVTGATNVPNTQRMGAPY
SAGRQYEFSENQYDGQGRMPYGNSYDSTNPYGNVGTSNTQGYGAYGNVSG
SYGPGNETREQYNPQSINPRYSQQSGAQSGTQYRNPGWSENGAQRPMNNH
MGGNFYNSHASNNSGRSGGMRGQAEVGQDNRYIEGEYGRSNINGEYGGPQ
VYGNRQSAGVPGVSSSGANAPALNTGVDIGRLNHLISAFQQKQAAQGIVP
DASSRVVLSRMGARRDGVPPPPPSIPSASGAAVPPVPPQGVSHVLSVAGA
QQALHHIGGGQLGSYPIAPKGSGGFSGGGSYHPNPQHGLPPQGGRRGPGY
YQRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR036621Anticodon-bd_dom_sf
IPR035979RBD_domain_sf