Gchil604.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil604.t1
Unique NameGchil604.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length192
Homology
BLAST of Gchil604.t1 vs. uniprot
Match: R7QA83_CHOCR (ArfX1 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QA83_CHOCR)

HSP 1 Score: 360 bits (925), Expect = 1.030e-125
Identity = 176/190 (92.63%), Postives = 184/190 (96.84%), Query Frame = 0
Query:    1 MGAALSACTGRPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLKLYGY 190
            MG+ALSACTGRP GKD DLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKE+VKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDP+RLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQD++DA SID +A +LELHDLPVRNYKVLPTVATDGTNLR+G KWMVDQLKLYGY
Sbjct:    1 MGSALSACTGRPGGKDGDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEIVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPNRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDVADAVSIDTVAKDLELHDLPVRNYKVLPTVATDGTNLREGLKWMVDQLKLYGY 190          
BLAST of Gchil604.t1 vs. uniprot
Match: UPI001E1DEB82 (LOW QUALITY PROTEIN: ADP-ribosylation factor 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEB82)

HSP 1 Score: 275 bits (704), Expect = 7.320e-92
Identity = 139/189 (73.54%), Postives = 157/189 (83.07%), Query Frame = 0
Query:    1 MGAALSACTGRPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLKLYG 189
            MG  LS C G+   +D  LP VLLVGLDG+GTTTILYQ+K G K+ETIPTLG+NKEVV V  +DFELYDVGGLEKVRALWRTYSKEANGVAYVVD+SD  RLPQA+EELK+LFFGD+KKKSLIVPDIPLLVLANK D+  A  +DQI   L+L DLPVR YKVLP+VAT+G NL++GF WMV QL  YG
Sbjct:    1 MGQILSLCMGQS--RDYKLPVVLLVGLDGTGTTTILYQLKQGHKVETIPTLGLNKEVVTVGDIDFELYDVGGLEKVRALWRTYSKEANGVAYVVDASDSRRLPQASEELKRLFFGDRKKKSLIVPDIPLLVLANKMDVDGALDVDQIEAALDLQDLPVRRYKVLPSVATEGRNLKEGFLWMVAQLHEYG 187          
BLAST of Gchil604.t1 vs. uniprot
Match: A0A1X6P3E7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3E7_PORUM)

HSP 1 Score: 199 bits (507), Expect = 3.390e-62
Identity = 97/182 (53.30%), Postives = 134/182 (73.63%), Query Frame = 0
Query:    5 LSACTGRPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLK 186
            +  C      + ++   +LL+GLDGSG TTILYQ+  G++LETIPTLG N EV++ DG++FEL+D+GGL+K+R LWR YS+EANG+ +VVDS+D SR P+AAEELKK FFGD  ++S ++PD PLLV ANKQD++ AAS+ +I   L+L  LPVR++KV+P     G +L  G  WM  +L+
Sbjct:    1 MGGCVPSRERRASNSRVLLLLGLDGSGATTILYQMVLGRRLETIPTLGFNHEVIRYDGLEFELWDIGGLDKMRPLWRQYSREANGIIFVVDSADRSRFPKAAEELKK-FFGDGGRRSFVLPDNPLLVFANKQDVNGAASVPEIEEVLDLSSLPVRSFKVVPCCGRTGASLGIGLDWMTAELQ 181          
BLAST of Gchil604.t1 vs. uniprot
Match: R7QEX2_CHOCR (ArfX2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEX2_CHOCR)

HSP 1 Score: 164 bits (415), Expect = 4.100e-48
Identity = 88/186 (47.31%), Postives = 123/186 (66.13%), Query Frame = 0
Query:    1 MGAALSACTGRPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLK 186
            MGA +SA   R +G       VL++GLDG+G TTILYQ+  GK+LETIPTLG+N+E V VDG++ E +D+GGL++VR LWR YS++A+ V +VVDSSD  RL  A+ EL  L+ G  K+ S I  D PLL+ ANKQD   A S  Q+   L+++ + V  +++ P  A +  +L  G  W+V +LK
Sbjct:    1 MGACMSASHFRHAGSRG----VLVLGLDGAGATTILYQLVLGKRLETIPTLGLNQESVTVDGLELECWDIGGLDQVRTLWRQYSRDADAVIFVVDSSDVERLKLASTELASLYKGHSKRNS-IQHDRPLLIFANKQDTPTAVSTQQVEKVLKVNYIHVDTFRIFPCSANNRESLMKGINWLVTELK 181          
BLAST of Gchil604.t1 vs. uniprot
Match: A0A7S2ZXC9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZXC9_9RHOD)

HSP 1 Score: 163 bits (413), Expect = 7.980e-48
Identity = 79/182 (43.41%), Postives = 124/182 (68.13%), Query Frame = 0
Query:    5 LSACTGRPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLK 186
            +   + R S  D ++  +L++GLDG+G+TTILY++   K ++TIPTLG+N+E +   G+D++++D+GGL+K+R LW+ YS+  +   +V+D++D  R   AA+EL+  FF D   KS  +P  PLLV ANK+DL DA +  +I   L+L +LPV NYK++P     G NLR+G +W+ D+LK
Sbjct:    1 MGCISSRISRSDGNVKSLLMIGLDGAGSTTILYRLVLNKCIDTIPTLGVNQESLSFGGIDYDIWDMGGLDKMRPLWKQYSRATDAYIFVLDAADQERAILAADELES-FFDDIDLKSHEIPGDPLLVYANKKDLPDAMTTSEIENMLKLPELPVSNYKIVPCCGKTGENLREGLEWLTDELK 181          
BLAST of Gchil604.t1 vs. uniprot
Match: A0A2V3IL58_9FLOR (ADP-ribosylation factor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL58_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 3.630e-47
Identity = 89/165 (53.94%), Postives = 113/165 (68.48%), Query Frame = 0
Query:   22 VLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLK 186
            VL++GLDG+GTTTILYQ+  GK+LETIPTLG+N E V+ DG+  + +DVGGL+KVR LWR   K+A+ V +VVDS+D  R+  AAEEL KL+  D    S  + D PLLV ANKQDL DAASI  +   L +  L V   KVLP+ A D  +L  G +W+  QLK
Sbjct:   16 VLVLGLDGAGTTTILYQLVLGKRLETIPTLGVNHEKVQADGLQLDCWDVGGLDKVRPLWRQCFKDADAVIFVVDSTDLPRMRLAAEELAKLYRTD-SSTSAAMKDRPLLVFANKQDLRDAASIKMVEKVLRIEALNVTCTKVLPSSANDRQSLVKGVQWLTAQLK 179          
BLAST of Gchil604.t1 vs. uniprot
Match: A0A7S0BQY1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQY1_9RHOD)

HSP 1 Score: 159 bits (403), Expect = 2.040e-46
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 0
Query:    8 CTGRPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLK 186
            C      K  +   +LL+G+DG+G+TT+LYQ+   +++ETIPTL  N+E +  +GM +E++D+GG +KVR LW  Y++EA+ + YVVD++D +RLP AA ELK LF  D +         PLL+ ANKQ++  A ++D++   L +  LP  NYK++   A  G NL DG  W+  QLK
Sbjct:    3 CIQSSEKKQANHRSLLLLGIDGAGSTTVLYQLVQHERVETIPTLAFNRETLAFEGMKYEIWDIGGNDKVRPLWTKYAREAHAIIYVVDATDKTRLPMAARELK-LFIDDSENNHYPTSKNPLLIFANKQEMDGAKNVDEMREALGMDSLPFTNYKIVGCSAKTGDNLNDGLHWLTQQLK 180          
BLAST of Gchil604.t1 vs. uniprot
Match: A0A5J4YKF8_PORPP (ADP-ribosylation factor n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKF8_PORPP)

HSP 1 Score: 160 bits (404), Expect = 2.260e-46
Identity = 83/172 (48.26%), Postives = 115/172 (66.86%), Query Frame = 0
Query:   22 VLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDK------KKKSL--IVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQL 185
            +LL+GLDG+G TT+ YQ   GK + T+PT+G NKE +K +G  ++ +DVGG   VR  WR Y+K A+ + +VVD+ D SR+P+AAE LKKLFFG+       K KS+     DIPLLVLANKQDL+D  + D+I   L+L  LPVR+  V+PT A +G N++    W+  +L
Sbjct:   25 ILLIGLDGAGKTTVCYQFLLGKHVHTVPTMGHNKETLKHEGKKYDFFDVGGSMLVRETWRLYAKAADCIIFVVDAHDRSRIPEAAESLKKLFFGEDYEAAAAKSKSVNSTAYDIPLLVLANKQDLADPMNSDEIEKALDLASLPVRSRIVIPTDAKNGENIQAALMWLTGEL 196          
BLAST of Gchil604.t1 vs. uniprot
Match: A0A7S1EUU0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUU0_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 1.670e-44
Identity = 78/176 (44.32%), Postives = 112/176 (63.64%), Query Frame = 0
Query:   11 RPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLK 186
            RPSG       VL++GLDG+G+TT++YQ+  GKK++TIPTLG N E VK +GM+ E++D+GG+EKVR +WR Y+ EA+ + +VVD +D +R PQA EEL+K F+ D  +K      IPLL+  NK DL +   I  +  EL     PV  Y+ +      G N+  G  W+ ++LK
Sbjct:   10 RPSGSSRS---VLMLGLDGAGSTTVMYQIVLGKKVDTIPTLGFNHETVKYNGMELEMFDLGGVEKVRPVWRQYASEADAIIFVVDGNDSARFPQAREELQK-FYSDIDQKR-----IPLLLFLNKTDLPNCVDIPTLEAELNPSQFPVSCYQTMVCCGKTGENISAGLDWLTEKLK 176          
BLAST of Gchil604.t1 vs. uniprot
Match: M2XZ20_GALSU (ADP-ribosylation factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZ20_GALSU)

HSP 1 Score: 147 bits (372), Expect = 1.150e-41
Identity = 76/164 (46.34%), Postives = 105/164 (64.02%), Query Frame = 0
Query:   22 VLLVGLDGSGTTTILYQVKHGKKLETIPTLGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPSRLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATELELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQL 185
            V+L+GLDGSG TTILY +K GK++ T+PTLG N E V+    +  ++D+GGL+KVR+LW  +SK+A GV +VVDS D  R+PQA E L       K+        +PLLV ANKQD   A +   IA ELELH L +++Y+V+P     G  L DG  W++ ++
Sbjct:   19 VVLIGLDGSGATTILYFLKLGKQMMTMPTLGCNTETVQYGDNELVIWDIGGLDKVRSLWSEFSKDAQGVIFVVDSYDRERIPQAKEALFNFLRTQKQSDR----KVPLLVFANKQDKEGALAPADIANELELHKLALQSYQVVPCSGRTGEGLSDGMNWLLTEI 178          
The following BLAST results are available for this feature:
BLAST of Gchil604.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QA83_CHOCR1.030e-12592.63ArfX1 n=2 Tax=Rhodymeniophycidae TaxID=2045261 Rep... [more]
UPI001E1DEB827.320e-9273.54LOW QUALITY PROTEIN: ADP-ribosylation factor 6-lik... [more]
A0A1X6P3E7_PORUM3.390e-6253.30Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QEX2_CHOCR4.100e-4847.31ArfX2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7... [more]
A0A7S2ZXC9_9RHOD7.980e-4843.41Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IL58_9FLOR3.630e-4753.94ADP-ribosylation factor n=1 Tax=Gracilariopsis cho... [more]
A0A7S0BQY1_9RHOD2.040e-4642.46Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YKF8_PORPP2.260e-4648.26ADP-ribosylation factor n=1 Tax=Porphyridium purpu... [more]
A0A7S1EUU0_9RHOD1.670e-4444.32Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2XZ20_GALSU1.150e-4146.34ADP-ribosylation factor n=1 Tax=Galdieria sulphura... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 49..73
score: 29.88
coord: 21..44
score: 37.01
coord: 159..183
score: 22.12
coord: 76..101
score: 36.2
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 1..185
e-value: 1.1E-5
score: 34.9
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 22..184
e-value: 2.4E-45
score: 154.1
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..189
e-value: 8.0E-40
score: 148.3
NoneNo IPR availablePANTHERPTHR11711:SF381ADP-RIBOSYLATION FACTOR 1coord: 22..184
NoneNo IPR availablePROSITEPS51417ARFcoord: 13..185
score: 15.997171
NoneNo IPR availableCDDcd00878Arf_Arlcoord: 21..184
e-value: 1.46674E-53
score: 166.213
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 21..189
e-value: 3.7E-49
score: 168.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..185
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 22..178
e-value: 7.1E-13
score: 46.6
IPR024156Small GTPase superfamily, ARF typePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 22..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:575803..576378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil604.t1Gchil604.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 575803..576378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil604.t1 ID=Gchil604.t1|Name=Gchil604.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=192bp
MGAALSACTGRPSGKDTDLPCVLLVGLDGSGTTTILYQVKHGKKLETIPT
LGMNKEVVKVDGMDFELYDVGGLEKVRALWRTYSKEANGVAYVVDSSDPS
RLPQAAEELKKLFFGDKKKKSLIVPDIPLLVLANKQDLSDAASIDQIATE
LELHDLPVRNYKVLPTVATDGTNLRDGFKWMVDQLKLYGYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR024156Small_GTPase_ARF