Gchil5955.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5955.t1
Unique NameGchil5955.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length384
Homology
BLAST of Gchil5955.t1 vs. uniprot
Match: A0A2V3IMD5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD5_9FLOR)

HSP 1 Score: 350 bits (897), Expect = 2.150e-114
Identity = 177/334 (52.99%), Postives = 228/334 (68.26%), Query Frame = 0
Query:   34 LEEPPISFISDRVVINKGLNGAIAEHVLQLQSYLGWTCSTMTLFSQTNTSDFNAFVEHMYGCT-NMETGEIRDSPDCNCDIGIGGWLLNIERYGKVDFLPPFMFDRYAVFTHVTQATISGNKFFFLLAFDRKAWICIVAVITMFIFLKMLDVRFAVAAPYTPLPETCSRFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLNLFIGVCAIILILSYEASMTASLVQESITSNFRTAIDLQTCRIKPSEVCLVNGGALETLWKRSIALDKCHLQDRPTYFESAKTLFEAVENRKCQYALFLESAITAATRERYCGEFVM 366
            + E PISFI+DR   N G++GA++E+V +LQ +LGW CS++TLF   NTS FNAF+E M+ CT N  TG   +S  C CDIGIGGW  N  RYGKVDFLPPF+ DRY V THV+    SG   FFL  FD  +WI IVA+  +F  LK+LD RFAVA PYTPL    SR  R LH+L K   LYRLRKA QS+V R+ML  D  VVDNG +TRQW LNL IG+CA+ L+LS+EASMTASLVQE ITS + +  D ++C+I PS+VC + GGALE  W  +IA   CH  +   Y  + + +++ + + KC++++ LES IT   R + CG+ V+
Sbjct:    1 MHEAPISFINDRKFSNNGIDGAVSEYVSELQGFLGWRCSSVTLFQHQNTSGFNAFIEQMHECTTNQSTGVSSNS--CPCDIGIGGWFQNQFRYGKVDFLPPFVHDRYRVATHVSNTDASGEMPFFLKTFDSLSWITIVALTCIFTLLKLLDSRFAVAEPYTPLSGV-SRIRRCLHFLWKHPRLYRLRKAGQSSVTRLMLQPDNEVVDNGKSTRQWFLNLVIGICALFLVLSFEASMTASLVQEKITSTYESPEDFRSCKIPPSDVCALRGGALEMFWNTNIATSNCHNGNPIQYLSTYEEIYDGLASGKCKFSICLESVITTQIRTQSCGQLVL 331          
BLAST of Gchil5955.t1 vs. uniprot
Match: A0A2V3IME4_9FLOR (Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME4_9FLOR)

HSP 1 Score: 328 bits (840), Expect = 3.060e-105
Identity = 158/337 (46.88%), Postives = 215/337 (63.80%), Query Frame = 0
Query:   29 LRCCYLEEPPISFISDRVVINKGLNGAIAEHVLQLQSYLGWTCSTMTLFSQTNTSDFNAFVEHMYGCTNMETGEIRDSPDCNCDIGIGGWLLNIERYGKVDFLPPFMFDRYAVFTHVTQATISGNKFFFLLAFDRKAWICIVAVITMFIFLKMLDVRFAVAAPYTPLPETCSRFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLNLFIGVCAIILILSYEASMTASLVQESITSNFRTAIDLQTCRIKPSEVCLVNGGALETLWKRSIALDKCHLQDRPTYFESAKTLFEAVENRKCQYALFLESAITAATRERYCGEFV 365
            LRCC L+EPPI+FI DR   N G++G IA+++ ++Q YL W+CS++  ++    + FN FV  M  C+  E G +R+ P C CDIGI GW  N  R+ +VDFLPPF+ D Y V  H++ + +SG + FF+  FDR AW+ I  ++ +F  +K  D +F     +  L ET  R +R +H L K   LYR R+A QS   RM+LL D  VV+N    RQW+LN  I V  + LILSYEASMTASLVQE++++ F++  D QTCRI P+EVCL  GGALE  W  SIA++ CH Q +P +  S   LF AV+NR C+Y L LES   AA   +YCG+ +
Sbjct:   37 LRCCILDEPPIAFIDDRTYANGGVSGIIAQYLREMQGYLNWSCSSVQHYTGGKQTSFNHFVRMMEDCS--ENGAVRNDPGCTCDIGISGWFQNHHRFRRVDFLPPFVTDGYEVVFHISNSEVSGRRMFFITTFDRLAWVSIFGLMLLFSAIKFFDRKFCPIDSFEALEETNPRIQRFVHVLMKYPTLYRFRRALQSTFSRMILLPDSDVVENQTANRQWVLNTVISVSGLFLILSYEASMTASLVQETVSAGFQSIQDFQTCRISPAEVCLPGGGALEMFWNTSIAIEVCHKQRQPFFASSYDELFHAVDNRTCKYGLLLESTANAAINSKYCGKLL 371          
BLAST of Gchil5955.t1 vs. uniprot
Match: A0A2V3IMD4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD4_9FLOR)

HSP 1 Score: 296 bits (759), Expect = 2.590e-92
Identity = 140/335 (41.79%), Postives = 206/335 (61.49%), Query Frame = 0
Query:   29 LRCCYLEEPPISFISDRVVINKGLNGAIAEHVLQLQSYLGWTCSTMTLFSQTNTSDFNAFVEHMYGCTNMETGEIRDSPDCNCDIGIGGWLLNIERYGKVDFLPPFMFDRYAVFTHVTQATISGNKFFFLLAFDRKAWICIVAVITMFIFLKMLDVRFAVAAPYTPLPETCSRFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLNLFIGVCAIILILSYEASMTASLVQESITSNFRTAIDLQTCRIKPSEVCLVNGGALETLWKRSIALDK-CHLQDRPTYFESAKTLFEAVENRKCQYALFLESAITAATRERYCG 362
            LRCC + EPPI+F++DR   N G++G IA ++ Q+Q +L WTCS++  +S  +T+ FN F+  M  C+  E G I+D P C CDIGIGGW  N +R+G+VDFLPPF++D Y V  H++ + +SG   FF+  FD + W+CI  ++ +F  ++M    F   A Y PL  T +   RI H+L      YRLR + Q    RM+L+ +       N T  W+L   + +C + LIL+YEASMTAS+VQE++TS F++  D QTCRI P +VCL  GG+ +T W   +A ++ CH    P    S + +F+ VENR C++ + LES + +    +YCG
Sbjct:   37 LRCCIVYEPPIAFLNDRNYANLGIDGIIANYLNQMQGFLNWTCSSVQRYSDGSTTGFNNFITMMERCS--ENGTIKDDPHCKCDIGIGGWFTNSKRFGRVDFLPPFVYDSYQVIFHISDSKVSGRSPFFITTFDSRGWLCIFGLVLLFATIRMFS-AFGDHARYQPLEPTVTPIRRIAHFLYNHPFFYRLRISIQRIFSRMILMPEPEDFSRPNNTFLWILKTVVTICGLFLILAYEASMTASIVQETVTSEFQSGKDFQTCRIDPKDVCLPRGGSFDTYWTEVLAKERPCHKGRSPHLMTSYEEVFQGVENRTCRFGILLESTVHSTIHRKYCG 368          
BLAST of Gchil5955.t1 vs. uniprot
Match: A0A2V3IUK7_9FLOR (Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUK7_9FLOR)

HSP 1 Score: 265 bits (676), Expect = 7.560e-81
Identity = 133/343 (38.78%), Postives = 206/343 (60.06%), Query Frame = 0
Query:   25 SHSPLRCCYLEEPPISFISDRVVINKGLNGAIAEHVLQLQSYLGWTCSTMTLFSQTNTSDFNAFVEHMYGCTNMETGEIRDSPDCNCDIGIGGWLLNIERYGKVDFLPPFMFDRYAVFTHVTQATISGNKFFFLLAFDRKAWICIVAVITMFIFLKMLDVRFAVAAPYTPLPETCSRFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLNLFIGVCAIILILSYEASMTASLVQESITSNFRTAIDLQTCRIKPSEVCLVNGGALETLWKRSIALDKCHLQDR-PTYFE-SAKTLFEAVENRKCQYALFLESAITAATRERYCGEFV 365
            S + LRCC + EPPI ++      N G+NG I +++ ++Q+ L W CS    + + + + FN F++ M  CT  + G I+D P C C+IGIGGW  + +R  +VD LPPF++D   V  HV+    SG+K FF+  FD ++W+C+ A+I +F   K LD RFA   P    P   + + R LH+L       RL  + +S  +R++L SD  +V N +    + LNL IG+  ++++LSYEASMTA+LVQE++ S++++  DL+TCRIKP +VC+  G A+ T W  +IA   CH + +   YF  S +   +AV+N  C++ L L+S I  A   +YCG+ +
Sbjct:   31 SGTELRCCVIHEPPIVYLDPNTYSNNGINGIITKYLTEMQALLDWQCSEFIPYVEGDGTSFNRFIDMMDNCT--QNGAIKDDPACRCEIGIGGWFNSADRDERVDLLPPFVYDGIRVTFHVSNTRRSGSKLFFVTTFDLRSWLCLFAIIILFALAKFLDERFA-PIPSADEPNAANSWGRCLHFLRTNW--NRLITSIRSTTLRIVLQSDHDIVQNQHGAHNFNLNLIIGIFGLLVVLSYEASMTATLVQETVVSDYQSVEDLKTCRIKPEDVCVPGGSAVLTFWNDAIAYGDCHRESKGKNYFRGSFEETLDAVKNGTCKFGLVLDSTIQEAIHGKYCGQLL 368          
BLAST of Gchil5955.t1 vs. uniprot
Match: R7Q0P8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0P8_CHOCR)

HSP 1 Score: 170 bits (431), Expect = 6.970e-47
Identity = 88/186 (47.31%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   85 FNAFVEHMYGCTNMETGEIRDSPDCNCDIGIGGWLLNIERYGKVDFLPPFMFDRYAVFTHVTQATISGNKFFFLLAFDRKAWICIVAVITMFIFLKMLDVRFAVAAP-YTPLPETCSRFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLNLFIGVCAIILILSYEASMT 269
            FN+ VE M  C   E G +R+ PDCNCD+ +GGW+ +  R GKVDFLPPF+ D   + THV + +++    FFL AF    W  +V +  +F FLKMLD RF      YTPLP +  R  RI HYL K R+ YRLRKA QS + RM+  S+   V +  ++RQW+LNL I  C++ +IL+YE+SMT
Sbjct:   93 FNSIVEKMDRCVTEE-GTMREDPDCNCDMAVGGWMESDTRLGKVDFLPPFLIDGIGIATHVDETSVASAGAFFLTAFSLAVWGLVVMLSVVFTFLKMLDRRFVPPDDSYTPLPASEPRLRRIRHYLLKSRIPYRLRKALQSTLSRMVGFSNSDPVTDKESSRQWVLNLVIACCSLFIILAYESSMT 277          
BLAST of Gchil5955.t1 vs. uniprot
Match: R7QE12_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE12_CHOCR)

HSP 1 Score: 137 bits (344), Expect = 1.520e-35
Identity = 70/158 (44.30%), Postives = 96/158 (60.76%), Query Frame = 0
Query:  113 IGIGGWLLNIERYGKVDFLPPFMFDRYAVFTHVTQATISGNKFFFLLAFDRKAWICIVAVITMFIFLKMLDVRFAVA-APYTPLPETCSRFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLNLFIGVCAIILILSYEASMT 269
            + +GGW  N ER+ +VDFLPPF  D  ++  H    + +    FF+ AF    W  IV ++ +F FLKMLD RF      Y PLP T SR  R+ HYL K R+ YRLRKA QS + RM+       ++   ++RQW+LNL I +C++ LIL+YEA+MT
Sbjct:    1 MAVGGWFRNPERFRRVDFLPPFAIDGLSIVVHTDNTSSASAGAFFITAFSTTVWFFIVGLVCVFTFLKMLDRRFVPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTLSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYEAAMT 158          
BLAST of Gchil5955.t1 vs. uniprot
Match: R7Q656_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q656_CHOCR)

HSP 1 Score: 80.1 bits (196), Expect = 4.200e-15
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0
Query:  181 MLDVRFAVA-APYTPLPETCSRFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLNLFIGVCAIILILSYEASMT 269
            MLD RF      Y PLP T SR  R+ HYL K R+ YRLRKA QS + RM+       ++   ++RQW+LNL I +C++ LIL+YE++MT
Sbjct:    1 MLDRRFVPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTMSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYESAMT 90          
BLAST of Gchil5955.t1 vs. uniprot
Match: R7Q540_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q540_CHOCR)

HSP 1 Score: 79.7 bits (195), Expect = 9.790e-14
Identity = 35/98 (35.71%), Postives = 61/98 (62.24%), Query Frame = 0
Query:  269 TASLVQESITSNFRTAIDLQTCRIKPSEVCLVNGGALETLWKRSIALDKCHLQDRPTYFESAKTLFEAVENRKCQYALFLESAITAATRERYCGEFVM 366
            +A+LVQ++++S +R   DL+TC ++PS+VC+  GGA++  W  +I  + CH +++P YF   K   + +  +KC Y L L S+    T+  YCG  ++
Sbjct:   10 SAALVQDTLSSRYRGLQDLKTCNVRPSDVCVPKGGAIDLFWINTIGKNACH-KEKPVYFSRYKDGIDNLLTKKCLYMLTLSSSGNELTQREYCGRLLV 106          
The following BLAST results are available for this feature:
BLAST of Gchil5955.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IMD5_9FLOR2.150e-11452.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IME4_9FLOR3.060e-10546.88Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IMD4_9FLOR2.590e-9241.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUK7_9FLOR7.560e-8138.78Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gra... [more]
R7Q0P8_CHOCR6.970e-4747.31Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QE12_CHOCR1.520e-3544.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q656_CHOCR4.200e-1547.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q540_CHOCR9.790e-1435.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..264
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 265..383
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 110..368
NoneNo IPR availableTMHMMTMhelixcoord: 247..264
NoneNo IPR availableTMHMMTMhelixcoord: 165..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025225_piloncontigtig00025225_pilon:459860..461472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5955.t1Gchil5955.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025225_pilon 459860..461472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5955.t1 ID=Gchil5955.t1|Name=Gchil5955.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=384bp
MKSLSVLILFALPLTVLCIQNSLQSHSPLRCCYLEEPPISFISDRVVINK
GLNGAIAEHVLQLQSYLGWTCSTMTLFSQTNTSDFNAFVEHMYGCTNMET
GEIRDSPDCNCDIGIGGWLLNIERYGKVDFLPPFMFDRYAVFTHVTQATI
SGNKFFFLLAFDRKAWICIVAVITMFIFLKMLDVRFAVAAPYTPLPETCS
RFERILHYLTKGRLLYRLRKATQSAVMRMMLLSDGGVVDNGNTTRQWLLN
LFIGVCAIILILSYEASMTASLVQESITSNFRTAIDLQTCRIKPSEVCLV
NGGALETLWKRSIALDKCHLQDRPTYFESAKTLFEAVENRKCQYALFLES
AITAATRERYCGEFVMPPSNCRQGRPLQHWALI*
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