Gchil5945.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5945.t1
Unique NameGchil5945.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length710
Homology
BLAST of Gchil5945.t1 vs. uniprot
Match: A0A2V3IVI3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVI3_9FLOR)

HSP 1 Score: 142 bits (358), Expect = 1.390e-31
Identity = 211/776 (27.19%), Postives = 309/776 (39.82%), Query Frame = 0
Query:    1 MDEVLTLKPATAIRCLQAAVRDSQNSNRASYAAKNRPEWWKENVNVKLPDDSVAKTGIFVSHSKCAWQPQQVQAALVLYYRHLHGEHHRSPS----------PPQHPHEHSXXXXXXXXXXXPRTPIKEEQEFAHNTDAAASTAAAQHRASDVPPRASTRRQVKRAVTFNEHPIANVHHTPPPNVRG-TRRRKIVLTPESSERSAPEDAVTSPPSAEAQALKTEVRVEGTQTRAR-----PSR------------------SQQRGKTEATAXXXXXXXXXXXXXXXXXXXXXXXRTRQHNGAIAKKKNKXXXXXXXXXXXXXXXXXXXXXXPSATPTASVQDERRNAQNDECDGKTEST-SLRKIQSVLPA----RXXXXXXXXXXXXXXXFGRVKRRLDGTMSTSRSATSRSALRSLTNV----ADTKATQDGKRRKTARVSXXXXXXXXXXXLDKAATEKKRKSAGGT-------DEGDQYASAS----DMEGGNETGSED----GGMTEEERKERYEGVMVAVATLEKAHSDCVAELARSGARLAEELEVEREHQANKLRQHYKMRLMHMRDAELGTRVGRMVYELHGDVGNLLVKEIAHAADSIM-----TGEAGVSGGGDDDKXXXXXXXXXXXXGMHDSRTRSLRRAVAVATTERKRVNRERSIATR---ASVRRSTRKAAQTATARTARILGALHATPTG--YAQQXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAVWDALLSEIARLRALGDGGAALETLRVRLHAA 708
            MD V +L   T +R LQ AVR++Q S RASYA K+RPEWW E   V+LPD + A TG F+SHSK AW   QV+AALVLYYRHL+G+   S +          PP+     +            R+  KEE     +     ST A      D  PRA TR ++K+ V     PI       P + RG ++ R+IV++   +E SA    + SP      +  T+  V+  +T+ R     P R                   +++G++E  +                                 + +                          A+P    +++RR+    + + +T +T SLR  +S++      R                   +R+LD   S  +S   RS    L+       D    ++ +R  T               +   AT  K+   GG        ++G    +++    D++ G   GSED      M   E K R E +M  +  LEKA  + + ++          +E + E   +K R+  K++ MHMR  EL T V  MVY+  GD   +LVK    AA  I+      G + +  G D                    R RSLR AVA+AT E+KR+N ER  ATR    +VRRS RKAAQ AT RT RIL        G   AQ+                               +  + +E+ RLRAL +G  AL  L+ ++  A
Sbjct:    1 MDGVCSLSLRTGVRLLQTAVRETQGSKRASYAVKDRPEWWNEKHQVELPDGTSAVTGRFISHSKSAWTLPQVKAALVLYYRHLNGDEEPSSATHQQSRHESVPPRSQAPKTEESVSSNPSRVTRSQKKEEALIEDSHGQIPSTHATA--TEDASPRA-TRARLKKPVN-RTRPI-------PRHARGKSKARRIVISDSEAESSA----LASPIKRHQSSSHTQHSVQSFETQKRNKCTNPGRINRRPRAKGENEEIEAQPEEEQGRSERRSAQMVKAPAAKTCSPKKRNENRKPSKTIKRSVRVRPRGPSKTAPLPQTNLAIKAEVQESSTRDASPGPPKKEKRRHETVPKAEKQTTATNSLRLKRSLISTHSECRTPLAPLQDIANENANRCLKRRKLDRADSFDKSKQKRSKNGGLSGAEVEEGDVIVEKENERPSTDDTGVD---------VSPVATSCKKAKQGGESMAQERLEDGIALEASNEVVVDVDNGVYNGSEDEEDKAAMAAAEEK-RNEQIMALIEELEKARGEALQKMDDKCTSQVRNVETQLEAYQSKQRRTGKVQRMHMRKEELSTLVRDMVYKYKGDTDQILVKGFESAAQEIVQRFNGAGASEIERGNDGHANGGVRFADE----AKTPRARSLRSAVAMATAEQKRLNYERCEATRNVRGTVRRSQRKAAQAATERTKRILSRYRGRTEGGMVAQEQDSDVEGTGRSEDANANGGDGSEE------AFTTIQAEMCRLRALPNGAQALAVLKAKVDDA 741          
The following BLAST results are available for this feature:
BLAST of Gchil5945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVI3_9FLOR1.390e-3127.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 552..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..612

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025225_piloncontigtig00025225_pilon:400959..403088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5945.t1Gchil5945.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025225_pilon 400959..403088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5945.t1 ID=Gchil5945.t1|Name=Gchil5945.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=710bp
MDEVLTLKPATAIRCLQAAVRDSQNSNRASYAAKNRPEWWKENVNVKLPD
DSVAKTGIFVSHSKCAWQPQQVQAALVLYYRHLHGEHHRSPSPPQHPHEH
SHPPHAASPPHPPRTPIKEEQEFAHNTDAAASTAAAQHRASDVPPRASTR
RQVKRAVTFNEHPIANVHHTPPPNVRGTRRRKIVLTPESSERSAPEDAVT
SPPSAEAQALKTEVRVEGTQTRARPSRSQQRGKTEATATTATTAGGSAAN
TTSVTEATESTRTRQHNGAIAKKKNKKKNKKKMGKKRRVQMTVEMVTKPS
ATPTASVQDERRNAQNDECDGKTESTSLRKIQSVLPARNGPDSETDDKTQ
STAFGRVKRRLDGTMSTSRSATSRSALRSLTNVADTKATQDGKRRKTARV
SKTRDENDESDELDKAATEKKRKSAGGTDEGDQYASASDMEGGNETGSED
GGMTEEERKERYEGVMVAVATLEKAHSDCVAELARSGARLAEELEVEREH
QANKLRQHYKMRLMHMRDAELGTRVGRMVYELHGDVGNLLVKEIAHAADS
IMTGEAGVSGGGDDDKDDKDDDEDEDEDGMHDSRTRSLRRAVAVATTERK
RVNRERSIATRASVRRSTRKAAQTATARTARILGALHATPTGYAQQQQQQ
QQESIEEREEGTGTETETETETVRAAVWDALLSEIARLRALGDGGAALET
LRVRLHAAL*
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