Gchil5930.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5930.t1
Unique Name	Gchil5930.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	148

Homology

[Close]

BLAST of Gchil5930.t1 vs. uniprot
Match: A0A2V3IVQ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVQ4_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 5.480e-30
Identity = 76/138 (55.07%), Postives = 86/138 (62.32%), Query Frame = 0

Query:    1 MSPTPTPSNTPNAILIAMLTRIASVTLKAALAFQSITVIARRNPPTIPLTVPASLVDTWFACIMYPTLVAATKARNPVDNATTRRFVRLEDVVTGNMSPSPHTFRMHGKLRNIARDAAPTKLVATAKVTIEFSTRNVF 138
            ++PTPTPS  PNAILIAML RIA VTLKAALA QS    AR +P   P +   SLV+T    I Y T  AA   +  VD A TRRF  L  VV GN SPS H   MHG L+NIA DA PT LVATA++    S +N F
Sbjct:   89 INPTPTPSRRPNAILIAMLIRIACVTLKAALALQSTAASARFSPEKNPPSKSDSLVETSLMNIRYTTHEAARNVKQHVDKANTRRFALLAGVVAGNDSPSSHNTLMHGTLKNIACDALPTCLVATARLATS-SPQNSF 225

The following BLAST results are available for this feature:

BLAST of Gchil5930.t1 vs. uniprot

BLAST of Gchil5930.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IVQ4_9FLOR	5.480e-30	55.07	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..147
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00025225_pilon	contig	tig00025225_pilon:216538..216981 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5930.t1	Gchil5930.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00025225_pilon 216538..216981 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5930.t1 ID=Gchil5930.t1|Name=Gchil5930.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=148bp
MSPTPTPSNTPNAILIAMLTRIASVTLKAALAFQSITVIARRNPPTIPLT
VPASLVDTWFACIMYPTLVAATKARNPVDNATTRRFVRLEDVVTGNMSPS
PHTFRMHGKLRNIARDAAPTKLVATAKVTIEFSTRNVFFAKKSPQYS*