Gchil5926.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5926.t1
Unique NameGchil5926.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length748
Homology
[Close]
BLAST of Gchil5926.t1 vs. uniprot
Match: A0A2V3IK15_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK15_9FLOR)

HSP 1 Score: 96.3 bits (238), Expect = 1.250e-19
Identity = 43/103 (41.75%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:  616 YSLVSIQFIDLSKGNWIVETKMGIIPSDRHAFIEPERNTLGPFQTRASAVEVGKERVGSICRRSWEGVVRDGNLKVVYDTSCKWGILWTPPNSRYSLIVVRVL 718
            +S V    + +++G W+VET+ G  P   H++I P + TLGP+QTR  AV VGK +V  +   SW  VV  G+ + V D+S +W +LW+PP+S YS +VV+++
Sbjct:   10 FSRVIALRVRVNEGRWLVETESGYFPDGFHSYIAPTKKTLGPYQTREIAVGVGKRQVCKVYGISWGEVVSGGDFETVADSSVRWEVLWSPPDSEYSRVVVKLV 112
The following BLAST results are available for this feature:
BLAST of Gchil5926.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK15_9FLOR1.250e-1941.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025225_piloncontigtig00025225_pilon:187014..189257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5926.t1Gchil5926.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025225_pilon 187014..189257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5926.t1 ID=Gchil5926.t1|Name=Gchil5926.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=748bp
MDRTFQQAAANIPHFPRVPLQSEPIPSQNSTNRCPNPTRFADSDQSLHSR
SAFERWNYSSPSREVRSSAAHDSSLIPSSRALTPTFQQSYNNVEQVRRDF
AAVVFIGDRQFQAVPVAIQTPRYHASSIQHDDRPNEAYIKREPSMQTRVH
HTINGGDHNDFSRTTSRAPHTLIPTCWPKQQTKAEGYVPKSNCCPSKKNR
VTWAAHDDTNRKHSSTWHPNRPPRPPRSILRSVSIRDQLTEQKPNAPKLR
DNSGIGSCAAPRPMLQSDPQPSNHSIQNLDRNSGALDRQTTNLKSIKSRQ
TMLEAVQEEYKEKRIRSLKNATNLKHNSRFYGGRTNSLPDTFSRCPPPKS
STLQNGEDLRRSESPNAFSRYNSADPSPPRIPPRPEIQKTTRQTHCRPQH
HLKTEAKHFSQNGAQEYCATVEKHNKPWKKPKSKYLKAMGEKSSRKTSGN
LSGMKKSKAKTKRFGSRFSSPSEIPTFQKSPISRANVGKDEPKPFSPFLP
TRSSRAKLIGETTKPTSTRNESPVGQRMIDIRSNRDDSGWFVTHEVGNCQ
TTKCWYEITTSRDIGLFRSQNEAYQAARAALYQADDPSKNRIRDMDIFNA
SVHRREISWRGDDANYSLVSIQFIDLSKGNWIVETKMGIIPSDRHAFIEP
ERNTLGPFQTRASAVEVGKERVGSICRRSWEGVVRDGNLKVVYDTSCKWG
ILWTPPNSRYSLIVVRVLPAIKEKRESSDKSEHTLENFGTNFWADHR*
back to top