Gchil583.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil583.t1
Unique NameGchil583.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length661
Homology
BLAST of Gchil583.t1 vs. uniprot
Match: A0A2V3IZL6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZL6_9FLOR)

HSP 1 Score: 750 bits (1937), Expect = 1.530e-264
Identity = 406/663 (61.24%), Postives = 488/663 (73.60%), Query Frame = 0
Query:    1 MCDQHS-LPVPPDAYDKVPLFIESDDPLFHVGKKELWHALRTARENPWVAEWLFSDHARPFHSHASVPPESFDNALAIHLHHDISTPDQCTPIDPYRQVARPVCGEKKLVFSKDIDLLLVPVAHLDGVTVGYTFIRGIREDAVHETMRPSFETARTTGIEFGAPTFIPGRFTFHNERRDYLMVVNGMSPHMTGIVSMRWRTESTRDRCFFAIPKANYGANNLPSRVLTVQCNVDHAINTSPNANRNTPHSECTQQTENSQSGTFPLAVNPTHDYLPQPSPKSIPIHFDFDSSADPVLEPREQEVPDPFFKLDANLDNTWAQGLETIGTIIPPGDANDLPELMQDIFPNTSFDDMEQLFNMANAVWSNESPFPVAEEQPNLLSPALSSFTASSRNTSGEKASGSQPHSAPEIDNHASSWLVSDGVSATPDGVGVPRRPGGNDTSSGAFNMSALSDSLQSIERSLKGNFFSPKVRKDIMHPQTGELLSRSTGQLTAKLETLDAFSLKLFREIAAQSYYASVMNMSSDNRLLPMIQPMPASDSLSNGGKAAHRNP--IRKRPVFKKVAPALLAPRPVAIVAAPDTGISDEQAAAKSKEEAVRQAKLEAKRIKNRMSAARSNQKRRAQLDAQRQELAALRQRAEELTNKKQVLMEENKALRRYVQES 660
            MCD  + L VPP AYDK+PL IESDDPL +VGKKEL  AL+TA ENPWVAEWLF+D  RPFH H SVPPE+F+ ALAIHLHHDISTPD C P++PY+++       KK+V SKDIDLLLVPVA +DGVTVGYTFIRGIRE  V +  R +F     +  +F  P F+PGRFTFHNERRDYLMVVNGMSP MTGIVSMRWR  +TRDRCFFAIPKA YG NNLP RVL+VQCNVDH + T P     TP  + T    + Q  T  +          Q  PK        DS+  P LEP++Q+VP P  K DA LDN+WAQGLET+GTII P  AN +PE+MQD FPNTS DDM QL +       + SPFP++++  +  SPA SS T+SS +T  E AS +     PE+D+  +SW+++D    TPDGVGVPRRPGGNDTSSGAF+MS+L DSL+SIERSLKG+FFSPKVRKDIMHPQTGEL+SRSTGQL AKL+T+D+ SL+LFRE+AAQSYY+SVM+MS DN LLP+ QP+ +   +        + P  +R++ + K+VAPA LAPRPV+I A       D++   KS+EEA RQAKLE KRIKNRMSAARSNQKRRAQL+AQR+ELAALR+R EELT+KKQV+MEEN  LR+ VQ+S
Sbjct:    1 MCDDDATLQVPPHAYDKIPLNIESDDPLLNVGKKELSIALQTAAENPWVAEWLFTDPGRPFHPHISVPPEAFEKALAIHLHHDISTPD-CAPVEPYQRILPSSEKPKKIVVSKDIDLLLVPVARMDGVTVGYTFIRGIREHTVEQKFRSAFGAPHPSDFDFNRPLFVPGRFTFHNERRDYLMVVNGMSPIMTGIVSMRWRDHATRDRCFFAIPKAEYGPNNLPRRVLSVQCNVDHVVGTDP-----TPPPQDTTSQLSQQLNTHQVXXXXXXXXXXQ-LPKESLFDIHVDSNVQPFLEPKDQQVPSPLLKFDAPLDNSWAQGLETLGTIISPEQANGIPEIMQDFFPNTSMDDMAQLLSSPETFGDDNSPFPLSDDLQHSTSPAESSLTSSSGSTQPELASKAM-QLVPEMDSVNNSWILTDENGRTPDGVGVPRRPGGNDTSSGAFDMSSLFDSLRSIERSLKGHFFSPKVRKDIMHPQTGELISRSTGQLMAKLDTIDSRSLQLFREVAAQSYYSSVMSMSRDNLLLPL-QPLISPTPMIQAVTPIPQPPRSVRQKTIQKRVAPAPLAPRPVSIAAXXXXXAPDDETVKKSEEEAARQAKLEVKRIKNRMSAARSNQKRRAQLEAQRKELAALRKRVEELTSKKQVMMEENMNLRKQVQKS 654          
BLAST of Gchil583.t1 vs. uniprot
Match: R7Q702_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q702_CHOCR)

HSP 1 Score: 326 bits (836), Expect = 1.060e-99
Identity = 242/609 (39.74%), Postives = 335/609 (55.01%), Query Frame = 0
Query:  116 LLLVPVAHLDGVTVGYTFIRGIREDAVHETMRPSFETARTTGIEFGAPTFIPGRFTFHNERRDYLMVVNGMSPHMTGIVSMRWRTES-TRDRCFFAIPKANYGANNLPSRVLTVQCNVDHAINTSPNANRNTPHSECTQQTENSQSGTFPLA------------VNPTHDYLPQPSPKSIPIHFDFDSSADPVLEPREQEVPDPFFKLDANL----------DNTWAQGLETIGTIIPP-GDAND-LPELMQDI------FP-----NTSFDDMEQLFNMANAVWSNESPFPVAE-----------EQPNLLSP-ALSSFTASSRNTS-GEKASGSQPHSAPEIDNHASSWLVSDGVSATPDGVGVPRRPGGNDTSSGAFNMSALSDSLQSIERSLKGNFFSPKVRKDIMHPQTGELLSRSTGQLTAKLETLDAFSLKLFREIAAQSYYASVMNMSSDNRLLPMI---QPMPASDSLSNGGKAAHRNPIRKRPVFK---KVAPALLAPRPVAIVAAP------------DTGISDEQAAAKSKEEAVRQAKLEAKRIKNRMSAARSNQKRRAQLDAQRQELAALRQRAEELTNKKQVLMEENKALRRYV 657
            +LLVPV ++   T+GY F++G+           S  TA     +   P FI GRF+F   RRD+LMVVN MSPH+TG++S+R R +   RDRCFFAIPKA+YG  NLP R L+VQC VD+ ++   +    TP  E     E       P                P H   P    +      D+D   DP  +    +V      + A+L            +WA GL+ +G +I P  D N  +PEL+ D       FP     N  F D E + +  N++   ESP P  E            +P++L   ALSS   SS  TS G   S      A E+     SW++S    +TPDGVGVPR PG NDTSSG+FNM++L DSL +IE+SLKG+F+ PKVRKD++HP TGEL+SR TG++ A ++ +DA SL   R+IAAQ+YY+SV++++ D RLLP+    +P  ++ + S   +     P RK+   +   + APA LAPRPV  ++ P            +   S     A + E++ R+AKLEAKRIKNR+SAARSNQKRRAQL+AQ+QELA LR+R +EL  ++  + EEN+ L+R +
Sbjct:    1 MLLVPVLNVADTTLGYAFLKGVTG--------ASMPTAAGDTPD-APPHFIAGRFSFDARRRDFLMVVNSMSPHVTGLMSIRMRDDHRARDRCFFAIPKADYGPGNLPGRALSVQCQVDYLVDGDDSDIPATPPYEYDPNAEYGDQDRPPAEDEICSGMTWDNHETPNHIADPPDVERDFAHQADYDDDDDPTSDVLLDQVVPGMPNISADLFLPQHQAEPLPESWADGLDAMGAVISPFEDPNGVIPELLNDFVVKGGAFPDDDDVNPIFSDDEDILSGINSIMP-ESPDPAHEYRKQNPTTGHKRRPDVLDQLALSSPVNSSSTTSNGTDFSFHTALPASEL-----SWILSS-AGSTPDGVGVPRVPGANDTSSGSFNMNSLVDSLATIEKSLKGSFYGPKVRKDVLHPLTGELVSRCTGKVRASIDNVDASSLFHLRKIAAQTYYSSVLSVAPDARLLPLSLASRPFISAPTTSTNLRQPTDEPRRKQGRTEPQHRPAPAPLAPRPVVTISLPPGLPHPEVLQLPEPIASTTIPPAPTDEKSAREAKLEAKRIKNRLSAARSNQKRRAQLEAQKQELAELRERVQELKWRETKVSEENEILKRQI 593          
BLAST of Gchil583.t1 vs. uniprot
Match: A0A2V3IZN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZN0_9FLOR)

HSP 1 Score: 98.6 bits (244), Expect = 5.180e-18
Identity = 82/252 (32.54%), Postives = 124/252 (49.21%), Query Frame = 0
Query:  407 APEIDNHASSWLVSDGVSATPDGVGVPRRPGGNDTSSGAFNMSALSDSLQSIERSLKGNFFSPKVRKDIMHPQTGELLSRSTGQLTAKLETLDAFSLKLFREIAAQSYYASVMNMSSDNRLLPMIQPMPASDSLSNGGKAAHRNPIRKRPV-FKKVAPALLAPRPVAIVAAPDTGISDEQAAAKSKEEAVRQAKLEAKRIKNRMSAARSNQKRRAQLDAQRQELAALRQRAEELTNKKQVLMEENKALRRYV 657
            A EID  +    + D  S   D VG+P  PG  DTSSGAFN  ALS+S+  IER++ G F S      +   +  EL  R+   ++    T  AF   L R  A   Y+A+   + +D R LP + P        +  +A    P   +P+      P  +AP+P+ +       +    AA +++E       LEA+R +NRMSAARSN++R+   +   Q L +L++R  EL  ++  L+EEN  LR  +
Sbjct:  245 AAEIDLPSQLPWIIDESSRPADNVGIPATPGNADTSSGAFNFDALSESIHDIERAICGRF-STSESAHMSFTKDFELPQRTVVDIS----TASAFDANLLRRRAVTEYFAATAPVVTDERYLPFVLP--------SNPQALLPMPQEDQPMGHSATRPTTIAPKPLPVSNTDRQTMQSNTAAQQARERM-----LEARRRRNRMSAARSNERRKQNWNRSMQTLNSLKKRVHELETRRAQLVEENDVLRHII 478          
The following BLAST results are available for this feature:
BLAST of Gchil583.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IZL6_9FLOR1.530e-26461.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q702_CHOCR1.060e-9939.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZN0_9FLOR5.180e-1832.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 581..656
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 607..626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..418
NoneNo IPR availableCDDcd14686bZIPcoord: 601..651
e-value: 2.10319E-11
score: 57.1701

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:388621..390603 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil583.t1Gchil583.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 388621..390603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil583.t1 ID=Gchil583.t1|Name=Gchil583.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=661bp
MCDQHSLPVPPDAYDKVPLFIESDDPLFHVGKKELWHALRTARENPWVAE
WLFSDHARPFHSHASVPPESFDNALAIHLHHDISTPDQCTPIDPYRQVAR
PVCGEKKLVFSKDIDLLLVPVAHLDGVTVGYTFIRGIREDAVHETMRPSF
ETARTTGIEFGAPTFIPGRFTFHNERRDYLMVVNGMSPHMTGIVSMRWRT
ESTRDRCFFAIPKANYGANNLPSRVLTVQCNVDHAINTSPNANRNTPHSE
CTQQTENSQSGTFPLAVNPTHDYLPQPSPKSIPIHFDFDSSADPVLEPRE
QEVPDPFFKLDANLDNTWAQGLETIGTIIPPGDANDLPELMQDIFPNTSF
DDMEQLFNMANAVWSNESPFPVAEEQPNLLSPALSSFTASSRNTSGEKAS
GSQPHSAPEIDNHASSWLVSDGVSATPDGVGVPRRPGGNDTSSGAFNMSA
LSDSLQSIERSLKGNFFSPKVRKDIMHPQTGELLSRSTGQLTAKLETLDA
FSLKLFREIAAQSYYASVMNMSSDNRLLPMIQPMPASDSLSNGGKAAHRN
PIRKRPVFKKVAPALLAPRPVAIVAAPDTGISDEQAAAKSKEEAVRQAKL
EAKRIKNRMSAARSNQKRRAQLDAQRQELAALRQRAEELTNKKQVLMEEN
KALRRYVQES*
back to top